| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716475
Identifier: 119716475
GI number: 119716475
Start: 2398722
End: 2399078
Strand: Direct
Name: 119716475
Synonym: Noca_2248
Alternate gene names: NA
Gene position: 2398722-2399078 (Clockwise)
Preceding gene: 119716474
Following gene: 119716476
Centisome position: 48.11
GC content: 68.91
Gene sequence:
>357_bases ATGATGCAGATGAACGAACGCTCCGAGGCCATCCGCCGAGCCCAGCGCGCCCTCAAGGCTCTCGGCGAGCACCCGCGCTC AAGCAAGAAGGAGCTCGGCCACGCGCGCGAACACGTCAACGCCTGCTACTCCCACGGCTCGGGTGAGTACGTGTGGAACG CCGTTGCACAGGTCGAGGCGATGGCCGATCGCCGATACGGCGTACCGAGCACAGACGAGCAGCGTCAGCTGGTCGAGGCG ACCGAGGACCTCGAGGAGCCTGCGACAGCCGCCCGCGGCCGAGCGGCCGAGGACCGCGCAATCCCGTCGACGTCGGCGAC CCCAGACGTGGAGCTCGCGCCCACTGCATCGCGATGA
Upstream 100 bases:
>100_bases CACCGCGGCTCGGCCTCGTCGACCTCGACACGGGCGAGATCCACGACGACGAGCTAGGCGGCGCTCAGCCGCGCACCCGC ACCGAGAAGGGACCCCGCGA
Downstream 100 bases:
>100_bases AGTGGGCACGACGGGCTCAAGACGGCGTTAGAACGCCGCTGAGAGAACGGCAACCCCTGCCAGCGGGTAGTCACACACCG CTTCGTTGTGGGAGAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MMQMNERSEAIRRAQRALKALGEHPRSSKKELGHAREHVNACYSHGSGEYVWNAVAQVEAMADRRYGVPSTDEQRQLVEA TEDLEEPATAARGRAAEDRAIPSTSATPDVELAPTASR
Sequences:
>Translated_118_residues MMQMNERSEAIRRAQRALKALGEHPRSSKKELGHAREHVNACYSHGSGEYVWNAVAQVEAMADRRYGVPSTDEQRQLVEA TEDLEEPATAARGRAAEDRAIPSTSATPDVELAPTASR >Mature_118_residues MMQMNERSEAIRRAQRALKALGEHPRSSKKELGHAREHVNACYSHGSGEYVWNAVAQVEAMADRRYGVPSTDEQRQLVEA TEDLEEPATAARGRAAEDRAIPSTSATPDVELAPTASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12987; Mature: 12987
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQMNERSEAIRRAQRALKALGEHPRSSKKELGHAREHVNACYSHGSGEYVWNAVAQVEA CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MADRRYGVPSTDEQRQLVEATEDLEEPATAARGRAAEDRAIPSTSATPDVELAPTASR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMQMNERSEAIRRAQRALKALGEHPRSSKKELGHAREHVNACYSHGSGEYVWNAVAQVEA CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MADRRYGVPSTDEQRQLVEATEDLEEPATAARGRAAEDRAIPSTSATPDVELAPTASR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA