| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716476
Identifier: 119716476
GI number: 119716476
Start: 2399221
End: 2400024
Strand: Direct
Name: 119716476
Synonym: Noca_2249
Alternate gene names: NA
Gene position: 2399221-2400024 (Clockwise)
Preceding gene: 119716475
Following gene: 119716478
Centisome position: 48.12
GC content: 71.14
Gene sequence:
>804_bases ATGCCGGATCAGCTGACCTCAGCGCTCCTGATCGTGGTGGCTATCGCCTACCTCGGCGGAGCCGTTCTGTTGATCGTGGC GCTTGCGAAGGTCCTGTTCGCCTGGTCGGTCAGCTGGCGCACCAGCGGGCAAACAAGCCCGGTTGACGTCGTGCTGCAGC AGCGGGCCGCCGCGGCGATGGCCGCCGTCGCCGCAGTCGCGAACGTCCCGCCTCCGGCAACCGACGTCGTTGCGATCCTG GGCGCCCCGGTCGCCGGGGAAGCCGATGGGACCGTGGGCGATGGTGGTCTCGCTGTGACCCGCTTCCGGGCTGGTCGTCC CCCCACCGTGGTGTTCGCGCGGGCTGCGCTCACCGGCCTCAGCGCCGGCGCAGTGCAGAGCCTGGCCGCCCACGAGCTCG GCCACGTCATCCGCCGCGAGCGCAGTTCGGCCGCGGCGCGGTACTCGTGGCTGGTCGGTTACCTACTCCTCGTGTTGGCA GGCGCTGGTCTCACTGCAGCTGCTCTTGTGGCCTCGCCCCAGCTGGCCGGCCCCTCGTTGCTGGCCACGATGAGTGCGGC CGTTGCGTTTCTCGGTCTCCGCTTCACCTTCGACCGGCGCGAGGAGGCTGCCGCCGATCTCTTCGCTATCGACCTGACTC GCGACCTGGACGCGGCCGCGGAGCTGATGCGGTTCTACGAGGAAAGCCTGGCGCGGCAGACGCCCGACGGCGGCCGCGCG TGGTCGCGGCTGGAGCGGAGGTGGTTCGCAACCCACCCCGAGCCGCAGGCGCGGCTCGCAGCCATGCGCCGTCGCCTTGG GTGA
Upstream 100 bases:
>100_bases GAGAACGGCAACCCCTGCCAGCGGGTAGTCACACACCGCTTCGTTGTGGGAGAGCCATTCTGATCGTTCTCGCCCCGTCG ACCTCCCAGGCGTAGAACTG
Downstream 100 bases:
>100_bases CGTCTCGAACGAGGTGGCGAAAACACCTCTGGTAGCAGCCGGACCGACCTCGTTGGCCCCTTCAGCGGCTGGCAGCCGAC GTAGTCCATCCGGTCGGCTG
Product: peptidase M48, Ste24p
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPDQLTSALLIVVAIAYLGGAVLLIVALAKVLFAWSVSWRTSGQTSPVDVVLQQRAAAAMAAVAAVANVPPPATDVVAIL GAPVAGEADGTVGDGGLAVTRFRAGRPPTVVFARAALTGLSAGAVQSLAAHELGHVIRRERSSAAARYSWLVGYLLLVLA GAGLTAAALVASPQLAGPSLLATMSAAVAFLGLRFTFDRREEAAADLFAIDLTRDLDAAAELMRFYEESLARQTPDGGRA WSRLERRWFATHPEPQARLAAMRRRLG
Sequences:
>Translated_267_residues MPDQLTSALLIVVAIAYLGGAVLLIVALAKVLFAWSVSWRTSGQTSPVDVVLQQRAAAAMAAVAAVANVPPPATDVVAIL GAPVAGEADGTVGDGGLAVTRFRAGRPPTVVFARAALTGLSAGAVQSLAAHELGHVIRRERSSAAARYSWLVGYLLLVLA GAGLTAAALVASPQLAGPSLLATMSAAVAFLGLRFTFDRREEAAADLFAIDLTRDLDAAAELMRFYEESLARQTPDGGRA WSRLERRWFATHPEPQARLAAMRRRLG >Mature_266_residues PDQLTSALLIVVAIAYLGGAVLLIVALAKVLFAWSVSWRTSGQTSPVDVVLQQRAAAAMAAVAAVANVPPPATDVVAILG APVAGEADGTVGDGGLAVTRFRAGRPPTVVFARAALTGLSAGAVQSLAAHELGHVIRRERSSAAARYSWLVGYLLLVLAG AGLTAAALVASPQLAGPSLLATMSAAVAFLGLRFTFDRREEAAADLFAIDLTRDLDAAAELMRFYEESLARQTPDGGRAW SRLERRWFATHPEPQARLAAMRRRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27919; Mature: 27787
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDQLTSALLIVVAIAYLGGAVLLIVALAKVLFAWSVSWRTSGQTSPVDVVLQQRAAAAM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH AAVAAVANVPPPATDVVAILGAPVAGEADGTVGDGGLAVTRFRAGRPPTVVFARAALTGL HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHC SAGAVQSLAAHELGHVIRRERSSAAARYSWLVGYLLLVLAGAGLTAAALVASPQLAGPSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHH LATMSAAVAFLGLRFTFDRREEAAADLFAIDLTRDLDAAAELMRFYEESLARQTPDGGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH WSRLERRWFATHPEPQARLAAMRRRLG HHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure PDQLTSALLIVVAIAYLGGAVLLIVALAKVLFAWSVSWRTSGQTSPVDVVLQQRAAAAM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH AAVAAVANVPPPATDVVAILGAPVAGEADGTVGDGGLAVTRFRAGRPPTVVFARAALTGL HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHC SAGAVQSLAAHELGHVIRRERSSAAARYSWLVGYLLLVLAGAGLTAAALVASPQLAGPSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHH LATMSAAVAFLGLRFTFDRREEAAADLFAIDLTRDLDAAAELMRFYEESLARQTPDGGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH WSRLERRWFATHPEPQARLAAMRRRLG HHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA