| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716474
Identifier: 119716474
GI number: 119716474
Start: 2398024
End: 2398725
Strand: Direct
Name: 119716474
Synonym: Noca_2247
Alternate gene names: NA
Gene position: 2398024-2398725 (Clockwise)
Preceding gene: 119716473
Following gene: 119716475
Centisome position: 48.1
GC content: 70.94
Gene sequence:
>702_bases GTGACCACCGAGCAGCAGACCCGCCGGGCGGCACCCACGCTGATGGTCTTCCCGTTCCCCGTCCCCGGGGACCATGTCCG GCTCGCCTACCGCGAGCTCCACATCGCCATCAGCGGCACCGAGGAGGAGAAGAAGGCCCTCGGCAACCACGCGCTGCTGT CGCGGCCCTGGGAGCCGGCGACTTGCCTGGACCCCGAGCTGCGTCACGACCTGTGGGAGTGGCTCGAGGACGTCGTGATC TGGCTCAACCGCGAGTACACCTGGGACGTCTCCGGTCTCATCCCCAGCTGCTGGCCTCTGCACCCGCACCTGGTCCACGA GATCGCCGTCCTTGCCGACCAGCGCCGGCGGGCCGGCCTGGCGATGACCAGCGACGCGCTCGAGGAGTGGCACCGCTACT GCCTGCCGGCGTTCACGGACCGGATGCGCAACAGGCTGCGCACCCACTGCGACGACGAGCACAAGAGCTGGCCGGCCAAC CCGCGCCACAGCGAGCACCTGGCCGACGCCAGCCGCCAGCGCCGCGAGAACACGATCGCCCGCGACATCGACGCTCTGCC CGTCAACCGTCGGGCACACGAACAATCGCCGGCCGGTCCACCGCGGCTCGGCCTCGTCGACCTCGACACGGGCGAGATCC ACGACGACGAGCTAGGCGGCGCTCAGCCGCGCACCCGCACCGAGAAGGGACCCCGCGAATGA
Upstream 100 bases:
>100_bases GCATGGTCATCACCCCCGAGGCCCGAGCCACCGCCGCGCTCGTCGAGGCGCGCCGTCTCGGTTTCGTCGACGACGAGACC GACCACGCAAGGAGTGAACT
Downstream 100 bases:
>100_bases TGCAGATGAACGAACGCTCCGAGGCCATCCGCCGAGCCCAGCGCGCCCTCAAGGCTCTCGGCGAGCACCCGCGCTCAAGC AAGAAGGAGCTCGGCCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTTEQQTRRAAPTLMVFPFPVPGDHVRLAYRELHIAISGTEEEKKALGNHALLSRPWEPATCLDPELRHDLWEWLEDVVI WLNREYTWDVSGLIPSCWPLHPHLVHEIAVLADQRRRAGLAMTSDALEEWHRYCLPAFTDRMRNRLRTHCDDEHKSWPAN PRHSEHLADASRQRRENTIARDIDALPVNRRAHEQSPAGPPRLGLVDLDTGEIHDDELGGAQPRTRTEKGPRE
Sequences:
>Translated_233_residues MTTEQQTRRAAPTLMVFPFPVPGDHVRLAYRELHIAISGTEEEKKALGNHALLSRPWEPATCLDPELRHDLWEWLEDVVI WLNREYTWDVSGLIPSCWPLHPHLVHEIAVLADQRRRAGLAMTSDALEEWHRYCLPAFTDRMRNRLRTHCDDEHKSWPAN PRHSEHLADASRQRRENTIARDIDALPVNRRAHEQSPAGPPRLGLVDLDTGEIHDDELGGAQPRTRTEKGPRE >Mature_232_residues TTEQQTRRAAPTLMVFPFPVPGDHVRLAYRELHIAISGTEEEKKALGNHALLSRPWEPATCLDPELRHDLWEWLEDVVIW LNREYTWDVSGLIPSCWPLHPHLVHEIAVLADQRRRAGLAMTSDALEEWHRYCLPAFTDRMRNRLRTHCDDEHKSWPANP RHSEHLADASRQRRENTIARDIDALPVNRRAHEQSPAGPPRLGLVDLDTGEIHDDELGGAQPRTRTEKGPRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26881; Mature: 26750
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEQQTRRAAPTLMVFPFPVPGDHVRLAYRELHIAISGTEEEKKALGNHALLSRPWEPA CCCHHHHHHCCCEEEEEECCCCCCHHEEEEEEEEEEEECCHHHHHHHCCHHHHCCCCCCC TCLDPELRHDLWEWLEDVVIWLNREYTWDVSGLIPSCWPLHPHLVHEIAVLADQRRRAGL CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC AMTSDALEEWHRYCLPAFTDRMRNRLRTHCDDEHKSWPANPRHSEHLADASRQRRENTIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH RDIDALPVNRRAHEQSPAGPPRLGLVDLDTGEIHDDELGGAQPRTRTEKGPRE HHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTEQQTRRAAPTLMVFPFPVPGDHVRLAYRELHIAISGTEEEKKALGNHALLSRPWEPA CCHHHHHHCCCEEEEEECCCCCCHHEEEEEEEEEEEECCHHHHHHHCCHHHHCCCCCCC TCLDPELRHDLWEWLEDVVIWLNREYTWDVSGLIPSCWPLHPHLVHEIAVLADQRRRAGL CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC AMTSDALEEWHRYCLPAFTDRMRNRLRTHCDDEHKSWPANPRHSEHLADASRQRRENTIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH RDIDALPVNRRAHEQSPAGPPRLGLVDLDTGEIHDDELGGAQPRTRTEKGPRE HHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA