| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716469
Identifier: 119716469
GI number: 119716469
Start: 2389370
End: 2390875
Strand: Direct
Name: 119716469
Synonym: Noca_2242
Alternate gene names: NA
Gene position: 2389370-2390875 (Clockwise)
Preceding gene: 119716468
Following gene: 119716470
Centisome position: 47.92
GC content: 71.51
Gene sequence:
>1506_bases ATGACCACCTACGCCGACTACCAGCGCGACCGTATCGGCTGGTTCTTCGGCCTCTCCGGAGGCCAGCTGATGTTCCTGGC GCTGGCCAGCCTGCCGGCGTTCTGGGCGATCAGCCGCGGAGCGTGGTTCTCCGCGTTTCTGTTCGCCCTGGTCTGGGTGT TCCTCCTGGCCATCACCGTGATCCCGGTGCGCGGCCGCTCGGCCACCGGCTGGGTGTTCGCCTCGACCATGTACGCCGTC GGCGGCCTGTTCGGCTGGACCTCGTTCCGCGCCAAGGCCACACAGGGCCGCGGCGACGACCTCGACACCCCGGACCTGCC CGGGGTCCTCCAGGGCGTCCAGATCCACGACGGCCCGCCGCACGGCTCGCAGCTGCAGCGCGTAGCGATCATCGAGGACC ACGCCATGAAGACCTGGGCGGTCACGGCCTCGATCGTGCACCCCGGCATCGGCATGAAGGACACCGAAGAGCGAGCCCGC TACGGCGAGGCGCTGGCCGGGCTGCTCGACGTCGCCGGTCGCACCGAGAAGGTCGACGAGATCCTCTTCATGGTGCGCAC CGTCCCCGAGGACGGCGCCGAGCGCGACCTGTGGGCAAACCGCCACCGCCGCCCCAACGCCCCGGAGCTGTCGGAGGTCG TCAACAGCGACCTGGCCCACGGCCTCACCCAGGCATCGGTGCGCACCGAGCAGTTCGTGACGATCCTGGTCCCGGAGACC CGGATCGCGAGGTCGGCCAAAGAGTCCGGGGGCGGCTTCGAGGGCCGCTGCCGCGAGCTCTACCTGCTCATGGCCGAGAT CGAGGCCCAGCTGCGCGGCCCGATGGGGATGACCACGGTGCGCTGGCTCACCAGCCCCGAGCTCGCACTGGCCTGCCGGA CCGGATTCGCCCCCGGCGACCGCGCCGGCATCGTCGAGGCCCTCTCGCTGCGGGAGAAGGACCCGAGCGTCAACGCCGAC GTCCCGTGGGCGATGGCCGGCCCCTCGGGTGCCGACGCCACAGTGCGGCACTACAGCCACGACGCCTGGAACTCGGTCAG CGCCACCATCAAGCTGCCGACCCGCGGCGTCGCGATGGGTGCCCTGGCACCGATCCTCACCCCCAGCGAGTTCGGTGAGC GGCGATCGTTCGTCGTCGCGTACCCGATCGTGTCCCAGACCAAGGCCGACCGGCAGTCCGGCAACGCCGAGTGGGCCGCC GACCTGGCCGAGGGGATGAACGAGAAGCTCGGCCGCAAGACCCGCGCCAAGCAGCGCGACGAAGCCCACAAGGCCCGCGG CCTGGACGCCAAGCTGGCCCGCGGCAACTCGCTGACCCGGCCCTACGGCGTGTGCACGGTCACCGTCCCCAAGTCGATGC GGATCACCGAGTTCGGGCGCCGCCTGGACGCCTCGGTCCGACGCGCCGGGTTCGCACCGCTGCGCCTCGACCTCGCCCAG GACGTCGGGTTCGCCGCGTCCACCATCCCCCTCGGCTCGAGCCTGACCCGGAGCGGAGACGCCTGA
Upstream 100 bases:
>100_bases CGGCCGCTGGCGGCATTCCACCGGTGGCGGGGTAACCGATGCACCGACCGCCCCACCTCGAGCACCGATCGACACCCACC GACCAGAAGGGAAGCCGACG
Downstream 100 bases:
>100_bases TGACCACCACCCCCCGCCGGAACCGCCGCGGCGGCCGCGACATGGCCGCCCTGCTCTCCGACTTCGGGCACGACCTGCCC ACGATCCCCACGCTCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MTTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITVIPVRGRSATGWVFASTMYAV GGLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPPHGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERAR YGEALAGLLDVAGRTEKVDEILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPET RIARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGDRAGIVEALSLREKDPSVNAD VPWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMGALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAA DLAEGMNEKLGRKTRAKQRDEAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQ DVGFAASTIPLGSSLTRSGDA
Sequences:
>Translated_501_residues MTTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITVIPVRGRSATGWVFASTMYAV GGLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPPHGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERAR YGEALAGLLDVAGRTEKVDEILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPET RIARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGDRAGIVEALSLREKDPSVNAD VPWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMGALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAA DLAEGMNEKLGRKTRAKQRDEAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQ DVGFAASTIPLGSSLTRSGDA >Mature_500_residues TTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITVIPVRGRSATGWVFASTMYAVG GLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPPHGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERARY GEALAGLLDVAGRTEKVDEILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPETR IARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGDRAGIVEALSLREKDPSVNADV PWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMGALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAAD LAEGMNEKLGRKTRAKQRDEAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQD VGFAASTIPLGSSLTRSGDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54382; Mature: 54250
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITV CCCCCCCCCCCCEEEEECCCCHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IPVRGRSATGWVFASTMYAVGGLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEECCCC HGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERARYGEALAGLLDVAGRTEKVDE CCHHHEEEEEECCCCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH ILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPET HHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH RIARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCC RAGIVEALSLREKDPSVNADVPWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMG HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCCEEEEEECCCCHHHH ALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAADLAEGMNEKLGRKTRAKQRD HHHHCCCCHHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQ HHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHH DVGFAASTIPLGSSLTRSGDA HCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITV CCCCCCCCCCCEEEEECCCCHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IPVRGRSATGWVFASTMYAVGGLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEECCCC HGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERARYGEALAGLLDVAGRTEKVDE CCHHHEEEEEECCCCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH ILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPET HHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH RIARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCC RAGIVEALSLREKDPSVNADVPWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMG HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCCEEEEEECCCCHHHH ALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAADLAEGMNEKLGRKTRAKQRD HHHHCCCCHHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQ HHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHH DVGFAASTIPLGSSLTRSGDA HCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA