Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716469

Identifier: 119716469

GI number: 119716469

Start: 2389370

End: 2390875

Strand: Direct

Name: 119716469

Synonym: Noca_2242

Alternate gene names: NA

Gene position: 2389370-2390875 (Clockwise)

Preceding gene: 119716468

Following gene: 119716470

Centisome position: 47.92

GC content: 71.51

Gene sequence:

>1506_bases
ATGACCACCTACGCCGACTACCAGCGCGACCGTATCGGCTGGTTCTTCGGCCTCTCCGGAGGCCAGCTGATGTTCCTGGC
GCTGGCCAGCCTGCCGGCGTTCTGGGCGATCAGCCGCGGAGCGTGGTTCTCCGCGTTTCTGTTCGCCCTGGTCTGGGTGT
TCCTCCTGGCCATCACCGTGATCCCGGTGCGCGGCCGCTCGGCCACCGGCTGGGTGTTCGCCTCGACCATGTACGCCGTC
GGCGGCCTGTTCGGCTGGACCTCGTTCCGCGCCAAGGCCACACAGGGCCGCGGCGACGACCTCGACACCCCGGACCTGCC
CGGGGTCCTCCAGGGCGTCCAGATCCACGACGGCCCGCCGCACGGCTCGCAGCTGCAGCGCGTAGCGATCATCGAGGACC
ACGCCATGAAGACCTGGGCGGTCACGGCCTCGATCGTGCACCCCGGCATCGGCATGAAGGACACCGAAGAGCGAGCCCGC
TACGGCGAGGCGCTGGCCGGGCTGCTCGACGTCGCCGGTCGCACCGAGAAGGTCGACGAGATCCTCTTCATGGTGCGCAC
CGTCCCCGAGGACGGCGCCGAGCGCGACCTGTGGGCAAACCGCCACCGCCGCCCCAACGCCCCGGAGCTGTCGGAGGTCG
TCAACAGCGACCTGGCCCACGGCCTCACCCAGGCATCGGTGCGCACCGAGCAGTTCGTGACGATCCTGGTCCCGGAGACC
CGGATCGCGAGGTCGGCCAAAGAGTCCGGGGGCGGCTTCGAGGGCCGCTGCCGCGAGCTCTACCTGCTCATGGCCGAGAT
CGAGGCCCAGCTGCGCGGCCCGATGGGGATGACCACGGTGCGCTGGCTCACCAGCCCCGAGCTCGCACTGGCCTGCCGGA
CCGGATTCGCCCCCGGCGACCGCGCCGGCATCGTCGAGGCCCTCTCGCTGCGGGAGAAGGACCCGAGCGTCAACGCCGAC
GTCCCGTGGGCGATGGCCGGCCCCTCGGGTGCCGACGCCACAGTGCGGCACTACAGCCACGACGCCTGGAACTCGGTCAG
CGCCACCATCAAGCTGCCGACCCGCGGCGTCGCGATGGGTGCCCTGGCACCGATCCTCACCCCCAGCGAGTTCGGTGAGC
GGCGATCGTTCGTCGTCGCGTACCCGATCGTGTCCCAGACCAAGGCCGACCGGCAGTCCGGCAACGCCGAGTGGGCCGCC
GACCTGGCCGAGGGGATGAACGAGAAGCTCGGCCGCAAGACCCGCGCCAAGCAGCGCGACGAAGCCCACAAGGCCCGCGG
CCTGGACGCCAAGCTGGCCCGCGGCAACTCGCTGACCCGGCCCTACGGCGTGTGCACGGTCACCGTCCCCAAGTCGATGC
GGATCACCGAGTTCGGGCGCCGCCTGGACGCCTCGGTCCGACGCGCCGGGTTCGCACCGCTGCGCCTCGACCTCGCCCAG
GACGTCGGGTTCGCCGCGTCCACCATCCCCCTCGGCTCGAGCCTGACCCGGAGCGGAGACGCCTGA

Upstream 100 bases:

>100_bases
CGGCCGCTGGCGGCATTCCACCGGTGGCGGGGTAACCGATGCACCGACCGCCCCACCTCGAGCACCGATCGACACCCACC
GACCAGAAGGGAAGCCGACG

Downstream 100 bases:

>100_bases
TGACCACCACCCCCCGCCGGAACCGCCGCGGCGGCCGCGACATGGCCGCCCTGCTCTCCGACTTCGGGCACGACCTGCCC
ACGATCCCCACGCTCGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MTTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITVIPVRGRSATGWVFASTMYAV
GGLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPPHGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERAR
YGEALAGLLDVAGRTEKVDEILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPET
RIARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGDRAGIVEALSLREKDPSVNAD
VPWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMGALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAA
DLAEGMNEKLGRKTRAKQRDEAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQ
DVGFAASTIPLGSSLTRSGDA

Sequences:

>Translated_501_residues
MTTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITVIPVRGRSATGWVFASTMYAV
GGLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPPHGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERAR
YGEALAGLLDVAGRTEKVDEILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPET
RIARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGDRAGIVEALSLREKDPSVNAD
VPWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMGALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAA
DLAEGMNEKLGRKTRAKQRDEAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQ
DVGFAASTIPLGSSLTRSGDA
>Mature_500_residues
TTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITVIPVRGRSATGWVFASTMYAVG
GLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPPHGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERARY
GEALAGLLDVAGRTEKVDEILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPETR
IARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGDRAGIVEALSLREKDPSVNADV
PWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMGALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAAD
LAEGMNEKLGRKTRAKQRDEAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQD
VGFAASTIPLGSSLTRSGDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54382; Mature: 54250

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITV
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IPVRGRSATGWVFASTMYAVGGLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEECCCC
HGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERARYGEALAGLLDVAGRTEKVDE
CCHHHEEEEEECCCCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
ILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPET
HHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH
RIARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCC
RAGIVEALSLREKDPSVNADVPWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMG
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCCEEEEEECCCCHHHH
ALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAADLAEGMNEKLGRKTRAKQRD
HHHHCCCCHHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQ
HHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHH
DVGFAASTIPLGSSLTRSGDA
HCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTYADYQRDRIGWFFGLSGGQLMFLALASLPAFWAISRGAWFSAFLFALVWVFLLAITV
CCCCCCCCCCCEEEEECCCCHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IPVRGRSATGWVFASTMYAVGGLFGWTSFRAKATQGRGDDLDTPDLPGVLQGVQIHDGPP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEECCCC
HGSQLQRVAIIEDHAMKTWAVTASIVHPGIGMKDTEERARYGEALAGLLDVAGRTEKVDE
CCHHHEEEEEECCCCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
ILFMVRTVPEDGAERDLWANRHRRPNAPELSEVVNSDLAHGLTQASVRTEQFVTILVPET
HHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH
RIARSAKESGGGFEGRCRELYLLMAEIEAQLRGPMGMTTVRWLTSPELALACRTGFAPGD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCC
RAGIVEALSLREKDPSVNADVPWAMAGPSGADATVRHYSHDAWNSVSATIKLPTRGVAMG
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCCEEEEEECCCCHHHH
ALAPILTPSEFGERRSFVVAYPIVSQTKADRQSGNAEWAADLAEGMNEKLGRKTRAKQRD
HHHHCCCCHHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAHKARGLDAKLARGNSLTRPYGVCTVTVPKSMRITEFGRRLDASVRRAGFAPLRLDLAQ
HHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHH
DVGFAASTIPLGSSLTRSGDA
HCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA