Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716468

Identifier: 119716468

GI number: 119716468

Start: 2387334

End: 2389304

Strand: Direct

Name: 119716468

Synonym: Noca_2241

Alternate gene names: NA

Gene position: 2387334-2389304 (Clockwise)

Preceding gene: 119716467

Following gene: 119716469

Centisome position: 47.88

GC content: 72.55

Gene sequence:

>1971_bases
GTGAGCACCGTCATCACCGCCGTGCGCCGGGCGAGCCGACTCGGCATCGCGGCCCTGGCGCTCCTGGTGCTCACCACGCT
CCTCGGAGCTGCCTCGACCCTCCAGCCTCCCGCCGCAGCGGCCAGCGAGCCGGCCGCCAGCACGGCGCACCTCGCTCCAG
TCGCCCCGGCGGCGACCAGCGGCACTCAGCCGACCCGCAACCTCAAGATGGGCTGCCCGGGGCCCGACGCCCTATGCGAC
CTCGGCAGCGACGCCGTCGACTGCGCCAAGGACCCGATCGATTGCGGCAAGGACGCCGCCGGCGATGTGAAGGACGGTGC
CGGCGACCTGCTCGACGGCGCAGGAGATCTGCTCCCCGACGGCTGCGGGATCCTCGACGCGATCTGCGGCAACATCGGCG
GACTGCCCGGGCTTTCGGGCGTCCCTGGGCTGCCCGGGATCCCCGGTCTGCCGAACGTCGGTGACCTCTTCGGCGGCGGC
ATCCCCGGGCTGGGCGACATCCCCAACCCGTTCGAGGCCATCGGCGACGTCATCGCCAAGGCCGCGGCCGACGCCTGGAC
CGCGGCCATGCTCGCGATCTGGAACTCCGGCCTGTTCGTGCTGCGCATCGTGCTCACGTTCAGTGAGCTGTTCTTGACTC
CGGACCTGAGCGCCGACGGCCCGGGCAAGGACGTCTACGCCTTCACCCTGTGGCTGGCGCTGGCCCTGGTGGTCATCTTG
GCGATGATCCAGCTCGGCGCCGCCGCCTTCAAGCGCGAGGGCAAGAGCCTCGCCCGGGCCTTCATCGGGTCCGGCCAGTT
CGTCTTGGTGTGCGCCAGCTGGTTCGGGTACTGCGTCATGATCATCGCGGCCTGCGGGGCGCTGACCAAGGCGCTGATGA
AGTCGCTGCTCAAGGTGCAGACCTGGCCCGACTGGGACCCGCTCGGCGGACTCGGCATCGACGACATCACCGACGCCGGC
GTGGCCACCGCGCTGGCATTCCTCGGGATCTTCCTGTGGCTGGCCGCCATCGGGCACGTCCTGGTCTACCTGGCCCGCGC
GGCGTCCCTGCTGGTGCTCACCGCCACGGGGCCGCTCGCGGCCGCCGGCCTGGTCTCGGAGTTCACCCGCTCCTGGTTCT
GGAAGTCGCTGCGCTGGTTCCACGCCGCGGCGTTCACCCCGGTGCTGATGGTGATGGTGCTGGGCATCGGCGTGCAGTTC
GCCAACGGAGTCGCCGCCCACCTAGCCGAGGACACCGCCAAGGCGTTCGGCACCGCGCTGCCGGCCGTGATGACGATCCT
GATCAGCGTCGTCGCCCCGCTGTCCCTGTTCAAGCTCCTTGCCTTCGTCGACCCCGGCACCCCCAGCGGCGCGTCCTTTC
GCCAGGGCATGGCCATCCAGGGCGGCCTCCAGGGCCTGCTCAGCGGCGGCGGCGCGGGCGGAGGCTCGTCGGCTGCGTCG
ACCACCGACGCCAACGGCCGCTCCTCGGGCGAGCAGAGTGCCGAGGCCTCGACCGGCGACCGGTTCAGCAAATCGACCCA
GGGCGCCCTGGGCAGCTTCGGCCCGGTGGGCCAGGCCCTGTCGACCGGCATGGGCTGGATCAACTCCGCCGGCGCGAAGG
CGACCTCGCTGATGTCGGACGAAACCAACCAGGCCGGTGTCGGCCAGAGCACCTACGGCCCCGACTTCAGCGGCCTGAGT
GGACGGCAGTCCGGTGGCCAGTCCGGCGGCCAGGGCGGGACCCACCCCGGGTCGCAGAACGGCGACCAGAGCGACGGGGA
TTCGTCGATGCCGACCCCGCCCACGCCTCCTGCGCCGCCCACCCCGCCGACGCTGCCCACTGGCGGCGGACCCGGCGGCG
GTTCAGGTGGCCAGGGCGGCAGGGGAGCTGACGCAGCTCCCAAGACCCCGGCCGCCGGCGGCGGGGGAGCAGCAGGAGGT
GCCGGCGGCGCCGGCGCGGCCGCTGGCGGCATTCCACCGGTGGCGGGGTAA

Upstream 100 bases:

>100_bases
ACATCGAGCACCTGGTCTCGGAGGGCCAGCCGCAGGCGGTGGCGCCCGGCACCCCCGAGTTCGCGAAGGCCGGCTGGATC
CGGATCAACGGAGCTCCCCA

Downstream 100 bases:

>100_bases
CCGATGCACCGACCGCCCCACCTCGAGCACCGATCGACACCCACCGACCAGAAGGGAAGCCGACGATGACCACCTACGCC
GACTACCAGCGCGACCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 656; Mature: 655

Protein sequence:

>656_residues
MSTVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATSGTQPTRNLKMGCPGPDALCD
LGSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPDGCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGG
IPGLGDIPNPFEAIGDVIAKAAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVIL
AMIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQTWPDWDPLGGLGIDDITDAG
VATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLAAAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQF
ANGVAAHLAEDTAKAFGTALPAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAS
TTDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSDETNQAGVGQSTYGPDFSGLS
GRQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPPTPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGG
AGGAGAAAGGIPPVAG

Sequences:

>Translated_656_residues
MSTVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATSGTQPTRNLKMGCPGPDALCD
LGSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPDGCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGG
IPGLGDIPNPFEAIGDVIAKAAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVIL
AMIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQTWPDWDPLGGLGIDDITDAG
VATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLAAAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQF
ANGVAAHLAEDTAKAFGTALPAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAS
TTDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSDETNQAGVGQSTYGPDFSGLS
GRQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPPTPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGG
AGGAGAAAGGIPPVAG
>Mature_655_residues
STVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATSGTQPTRNLKMGCPGPDALCDL
GSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPDGCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGGI
PGLGDIPNPFEAIGDVIAKAAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVILA
MIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQTWPDWDPLGGLGIDDITDAGV
ATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLAAAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQFA
NGVAAHLAEDTAKAFGTALPAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAST
TDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSDETNQAGVGQSTYGPDFSGLSG
RQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPPTPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGGA
GGAGAAAGGIPPVAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64303; Mature: 64172

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCC
GTQPTRNLKMGCPGPDALCDLGSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPD
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCHHCCCCCCCCCCCCCHHHHHCCHHCCCC
GCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGGIPGLGDIPNPFEAIGDVIAK
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVIL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQ
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TWPDWDPLGGLGIDDITDAGVATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH
AAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQFANGVAAHLAEDTAKAFGTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
TTDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSD
CCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCHHHHHHCC
ETNQAGVGQSTYGPDFSGLSGRQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGGAGGAGAAAGGIPPVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCC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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA