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The map label for this gene is ptlH [H]

Identifier: 119716450

GI number: 119716450

Start: 2369027

End: 2370706

Strand: Direct

Name: ptlH [H]

Synonym: Noca_2222

Alternate gene names: 119716450

Gene position: 2369027-2370706 (Clockwise)

Preceding gene: 119716449

Following gene: 119716451

Centisome position: 47.51

GC content: 69.7

Gene sequence:

>1680_bases
ATGAGCACCAACGGACACCACCCGGAGACCAACCGCCGCGACCCGCTGCGCGCAGACGAGTGGCTTGAGGCCCGCCATCC
CGCGAACCGTGAGCAGACCTCGCCGTTCGCCCGAGGACGCGGTTCCAACGGCACCCCGCCGCCCCCGCCGGTCGTCGAGG
ACGACGACCCGACCTCGCTGCCGATCTTCGCCGGCGCCTGGACCAGCGAAGGCGAGGGCCAGATGCCTGGCCGCGCCCGC
TCGGAGTTCAGCCTGCGCCCGCTTGTGGCGCCCGCACCGGAGCAGCACCAAGACACCCGCGGCACGGATGGCGAGGTCGA
GCTGGACTGGGAGCTGATCGCGCAATACCGCGCTGAGATCTCCGCGCGACTGACCGCCCGGCTCGACAAGGAAGGTGGTC
GGGTCACCGAGGAGGACCGCGAGCAGATGGGCCTCGACGTCATCGAGGAGCTCATCAAATCCGAGGCCGAGACGTTGGTC
TCGACCGGCCGTCCGCCGTGGACGAAGGACCACGAGAAGGCACTCAAGTCCGCCCTCCACGCCGCCCTGTTCGGGCTCGG
CCGCCTGCAGCCCCTGGTCGAGCGCGAGGACGTCGAGAACATCATCGTCATCGCCCGCGGCCCGGTCTGCTCGGTGTGGC
TGGAGCTGGTCGACGGCACCCTTGTGGAGGCCGCCCCGATCGCCGACTCCGAGGACGAGCTGCGCGAGTTCCTCTCCGAC
CTAGGCGCACGGCAGAACCGGCCCTTCACCGAGGCCCGGCCGCACCTGGACCTCCGGCTGCCCGGGGGAGCGCGGCTCGC
GGCCGGCTCCTGGGTGATGGCCTACACCTCCGTCGTGATCCGTCGCCACAGCATGCGCGAGGTGTCGATGGACGAGATGG
TCTACGACCGCAAGGCGTGCAGCGCGGTCCTGGCCGACTTCGTCGCAACCTGCGTGCGGGCGGGCAAGAGCATCGTCGTC
TCCGGGGTCCAAGGCAGCGGCAAGACCACCTGGGTCCGGGCCCTGTGCTCGTGCATCCCGCCCTGGGAGATGATCGGCAC
CTTCGAAACCGAGTTCGAGCTGCACCTGCACGAGCTCGTCGACCGCCACAAGATCGTCCACGCGTGGGAGCACCGCCCCG
GATCCGGCGAGGTCGGCATCGACGGCCGCCAGGCCGGTGAGTTCAGCCTCGAGGAGGCCATCCACCACTCCTTCCGGTTC
AGCCTCGCCCGCCAGATCGTCGGTGAGGTCCGCGGCCCGGAGGTCTGGAACATGCTCAAGGCCATGGAGTCCGGGCCGGG
CTCGATCAGCACCACCCACGCCCGCAGTGCCGAGCACACGATCGAGAAGCTCGTCTCCTGCGCCATGGAGAAAGGCCCCC
AGGTCACCCGCGAGCTGGCGATCAGCAAGCTGGCCGCCGCGATCGACATCGTGATGTACCTGCGCTCGGAGGTCGTCGCC
AATCCCGACGGCACCTTCCGCAAGCAGCGCTGGGTCGAGGAGGTCCTGGTCGTCCAGCCCAGCATCGACGCCGCCAGGGG
ATACGCCACCACCCCGATCTTCACCCCTAACCAGCTCGGCCAGGCCGTCGCGACCGGCAAGCTCGACAACTTCCTCGCCC
AGGAGCTGGCGCGGCATGGGTTCGACCTCGAGGCGTACAAGGCCGAGTCCCAGGCCAACCCGGGGGTGGCCACCTCATGA

Upstream 100 bases:

>100_bases
CCTCCGGACTGCGGCGCGGCTACCGAGGCAGCACCGCCGCAATCCAGTCCATCCTCGGCGCCAACCAGGCCGCCCTCGCT
CCCACGAACGGAGGCCACGC

Downstream 100 bases:

>100_bases
GCACTGCGTTCCTGCCCGCCGTCTTCGGTGCGCTCATCGTCATCGGTCTGATCGGGATGGTCTACGCGCTAATCCCCGCG
CCGCCGGAGCCGCCGCGGCC

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MSTNGHHPETNRRDPLRADEWLEARHPANREQTSPFARGRGSNGTPPPPPVVEDDDPTSLPIFAGAWTSEGEGQMPGRAR
SEFSLRPLVAPAPEQHQDTRGTDGEVELDWELIAQYRAEISARLTARLDKEGGRVTEEDREQMGLDVIEELIKSEAETLV
STGRPPWTKDHEKALKSALHAALFGLGRLQPLVEREDVENIIVIARGPVCSVWLELVDGTLVEAAPIADSEDELREFLSD
LGARQNRPFTEARPHLDLRLPGGARLAAGSWVMAYTSVVIRRHSMREVSMDEMVYDRKACSAVLADFVATCVRAGKSIVV
SGVQGSGKTTWVRALCSCIPPWEMIGTFETEFELHLHELVDRHKIVHAWEHRPGSGEVGIDGRQAGEFSLEEAIHHSFRF
SLARQIVGEVRGPEVWNMLKAMESGPGSISTTHARSAEHTIEKLVSCAMEKGPQVTRELAISKLAAAIDIVMYLRSEVVA
NPDGTFRKQRWVEEVLVVQPSIDAARGYATTPIFTPNQLGQAVATGKLDNFLAQELARHGFDLEAYKAESQANPGVATS

Sequences:

>Translated_559_residues
MSTNGHHPETNRRDPLRADEWLEARHPANREQTSPFARGRGSNGTPPPPPVVEDDDPTSLPIFAGAWTSEGEGQMPGRAR
SEFSLRPLVAPAPEQHQDTRGTDGEVELDWELIAQYRAEISARLTARLDKEGGRVTEEDREQMGLDVIEELIKSEAETLV
STGRPPWTKDHEKALKSALHAALFGLGRLQPLVEREDVENIIVIARGPVCSVWLELVDGTLVEAAPIADSEDELREFLSD
LGARQNRPFTEARPHLDLRLPGGARLAAGSWVMAYTSVVIRRHSMREVSMDEMVYDRKACSAVLADFVATCVRAGKSIVV
SGVQGSGKTTWVRALCSCIPPWEMIGTFETEFELHLHELVDRHKIVHAWEHRPGSGEVGIDGRQAGEFSLEEAIHHSFRF
SLARQIVGEVRGPEVWNMLKAMESGPGSISTTHARSAEHTIEKLVSCAMEKGPQVTRELAISKLAAAIDIVMYLRSEVVA
NPDGTFRKQRWVEEVLVVQPSIDAARGYATTPIFTPNQLGQAVATGKLDNFLAQELARHGFDLEAYKAESQANPGVATS
>Mature_558_residues
STNGHHPETNRRDPLRADEWLEARHPANREQTSPFARGRGSNGTPPPPPVVEDDDPTSLPIFAGAWTSEGEGQMPGRARS
EFSLRPLVAPAPEQHQDTRGTDGEVELDWELIAQYRAEISARLTARLDKEGGRVTEEDREQMGLDVIEELIKSEAETLVS
TGRPPWTKDHEKALKSALHAALFGLGRLQPLVEREDVENIIVIARGPVCSVWLELVDGTLVEAAPIADSEDELREFLSDL
GARQNRPFTEARPHLDLRLPGGARLAAGSWVMAYTSVVIRRHSMREVSMDEMVYDRKACSAVLADFVATCVRAGKSIVVS
GVQGSGKTTWVRALCSCIPPWEMIGTFETEFELHLHELVDRHKIVHAWEHRPGSGEVGIDGRQAGEFSLEEAIHHSFRFS
LARQIVGEVRGPEVWNMLKAMESGPGSISTTHARSAEHTIEKLVSCAMEKGPQVTRELAISKLAAAIDIVMYLRSEVVAN
PDGTFRKQRWVEEVLVVQPSIDAARGYATTPIFTPNQLGQAVATGKLDNFLAQELARHGFDLEAYKAESQANPGVATS

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014155
- InterPro:   IPR002078
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 61574; Mature: 61443

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNGHHPETNRRDPLRADEWLEARHPANREQTSPFARGRGSNGTPPPPPVVEDDDPTSL
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
PIFAGAWTSEGEGQMPGRARSEFSLRPLVAPAPEQHQDTRGTDGEVELDWELIAQYRAEI
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH
SARLTARLDKEGGRVTEEDREQMGLDVIEELIKSEAETLVSTGRPPWTKDHEKALKSALH
HHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AALFGLGRLQPLVEREDVENIIVIARGPVCSVWLELVDGTLVEAAPIADSEDELREFLSD
HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH
LGARQNRPFTEARPHLDLRLPGGARLAAGSWVMAYTSVVIRRHSMREVSMDEMVYDRKAC
HCCCCCCCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLADFVATCVRAGKSIVVSGVQGSGKTTWVRALCSCIPPWEMIGTFETEFELHLHELV
HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH
DRHKIVHAWEHRPGSGEVGIDGRQAGEFSLEEAIHHSFRFSLARQIVGEVRGPEVWNMLK
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AMESGPGSISTTHARSAEHTIEKLVSCAMEKGPQVTRELAISKLAAAIDIVMYLRSEVVA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NPDGTFRKQRWVEEVLVVQPSIDAARGYATTPIFTPNQLGQAVATGKLDNFLAQELARHG
CCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
FDLEAYKAESQANPGVATS
CCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
STNGHHPETNRRDPLRADEWLEARHPANREQTSPFARGRGSNGTPPPPPVVEDDDPTSL
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
PIFAGAWTSEGEGQMPGRARSEFSLRPLVAPAPEQHQDTRGTDGEVELDWELIAQYRAEI
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH
SARLTARLDKEGGRVTEEDREQMGLDVIEELIKSEAETLVSTGRPPWTKDHEKALKSALH
HHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AALFGLGRLQPLVEREDVENIIVIARGPVCSVWLELVDGTLVEAAPIADSEDELREFLSD
HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH
LGARQNRPFTEARPHLDLRLPGGARLAAGSWVMAYTSVVIRRHSMREVSMDEMVYDRKAC
HCCCCCCCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLADFVATCVRAGKSIVVSGVQGSGKTTWVRALCSCIPPWEMIGTFETEFELHLHELV
HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH
DRHKIVHAWEHRPGSGEVGIDGRQAGEFSLEEAIHHSFRFSLARQIVGEVRGPEVWNMLK
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AMESGPGSISTTHARSAEHTIEKLVSCAMEKGPQVTRELAISKLAAAIDIVMYLRSEVVA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NPDGTFRKQRWVEEVLVVQPSIDAARGYATTPIFTPNQLGQAVATGKLDNFLAQELARHG
CCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
FDLEAYKAESQANPGVATS
CCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]