| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716449
Identifier: 119716449
GI number: 119716449
Start: 2368191
End: 2369030
Strand: Direct
Name: 119716449
Synonym: Noca_2221
Alternate gene names: NA
Gene position: 2368191-2369030 (Clockwise)
Preceding gene: 119716448
Following gene: 119716450
Centisome position: 47.5
GC content: 72.74
Gene sequence:
>840_bases ATGGCGGTGATCGTCCTGGCCTCCGCGAGCGGTTCGCCCGGCGTGTCCACCACGGCGCTCGGGCTCACCCTCAACTGGCA CCGACCCGTGCTCCTGGTCGACGCAGACCCGACCGGATCCTCCTCGGTCTTCGCCGGCTACTTCCAGGGCGCCCAGGAGC CGACCGGCGGCCTGATCAACCTCGCCCTGTCCCTGCGCGAAGGAACGCTGGCGGACGCACTGCCCCGGGAGACGCTGCTG CTGGACCCCGAGGCGCCGGCCGAGCGGTCTGCTTGGTTCCTGCCCGGCATCCGGGCCCACGAGCAGGCCCCCAGCCTGCT GCCCCTGTGGGAACCGCTCACCGAGCAACTGCGCGCCCTCGACCGCAACGGCCAGGACGTCATCGTCGACGCCGGACGAC TCGGCCTCGCCGGCTGGCCCCAGCCGCTGATCGCTGCCTCCGACCTGACCCTGCTCGTCACCCGCAGCTCGCTGCCGGCC CTGGCCGGTGCCACCAGCTGGGCCAAGACCCTGCGGGCACAGTTCGCCGCGGTCGGTGGGCTCTCCCGTCTCGGGGGATT CCTCGTCGACGAGGAGCGACGCTGGCCCTCGCTTCCCACCGGCGCCCGAGTCCGGCCCTACACCGCACGCCACATCGCCA AGGCCCTCCAGATCCCCGTGGTCGCCTCCGTGGACTGGGAGCCCGCGGTGGCCGAGGTCTACTCCCACGGCGCCCGCAAG CCACGCAAGTTCGAGTCCTCCGGACTGCGGCGCGGCTACCGAGGCAGCACCGCCGCAATCCAGTCCATCCTCGGCGCCAA CCAGGCCGCCCTCGCTCCCACGAACGGAGGCCACGCATGA
Upstream 100 bases:
>100_bases CGTCGACGTCGCGGTGCCCGAAGCCGAGGCGGCCGAACTGGCTGCCCGGGCTGCCACCGGACGGGTCGCACTCGTCCTGG ACGCGCGGGAGCGCTGAGGC
Downstream 100 bases:
>100_bases GCACCAACGGACACCACCCGGAGACCAACCGCCGCGACCCGCTGCGCGCAGACGAGTGGCTTGAGGCCCGCCATCCCGCG AACCGTGAGCAGACCTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MAVIVLASASGSPGVSTTALGLTLNWHRPVLLVDADPTGSSSVFAGYFQGAQEPTGGLINLALSLREGTLADALPRETLL LDPEAPAERSAWFLPGIRAHEQAPSLLPLWEPLTEQLRALDRNGQDVIVDAGRLGLAGWPQPLIAASDLTLLVTRSSLPA LAGATSWAKTLRAQFAAVGGLSRLGGFLVDEERRWPSLPTGARVRPYTARHIAKALQIPVVASVDWEPAVAEVYSHGARK PRKFESSGLRRGYRGSTAAIQSILGANQAALAPTNGGHA
Sequences:
>Translated_279_residues MAVIVLASASGSPGVSTTALGLTLNWHRPVLLVDADPTGSSSVFAGYFQGAQEPTGGLINLALSLREGTLADALPRETLL LDPEAPAERSAWFLPGIRAHEQAPSLLPLWEPLTEQLRALDRNGQDVIVDAGRLGLAGWPQPLIAASDLTLLVTRSSLPA LAGATSWAKTLRAQFAAVGGLSRLGGFLVDEERRWPSLPTGARVRPYTARHIAKALQIPVVASVDWEPAVAEVYSHGARK PRKFESSGLRRGYRGSTAAIQSILGANQAALAPTNGGHA >Mature_278_residues AVIVLASASGSPGVSTTALGLTLNWHRPVLLVDADPTGSSSVFAGYFQGAQEPTGGLINLALSLREGTLADALPRETLLL DPEAPAERSAWFLPGIRAHEQAPSLLPLWEPLTEQLRALDRNGQDVIVDAGRLGLAGWPQPLIAASDLTLLVTRSSLPAL AGATSWAKTLRAQFAAVGGLSRLGGFLVDEERRWPSLPTGARVRPYTARHIAKALQIPVVASVDWEPAVAEVYSHGARKP RKFESSGLRRGYRGSTAAIQSILGANQAALAPTNGGHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29364; Mature: 29233
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIVLASASGSPGVSTTALGLTLNWHRPVLLVDADPTGSSSVFAGYFQGAQEPTGGLIN CEEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEHHHHCCCCCCCCCEEE LALSLREGTLADALPRETLLLDPEAPAERSAWFLPGIRAHEQAPSLLPLWEPLTEQLRAL EEEEECCCCHHHHCCCCEEEECCCCCCCCCEEECCCCCCHHCCCCCCCCHHHHHHHHHHH DRNGQDVIVDAGRLGLAGWPQPLIAASDLTLLVTRSSLPALAGATSWAKTLRAQFAAVGG CCCCCEEEEECCCCCCCCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC LSRLGGFLVDEERRWPSLPTGARVRPYTARHIAKALQIPVVASVDWEPAVAEVYSHGARK HHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC PRKFESSGLRRGYRGSTAAIQSILGANQAALAPTNGGHA CCHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCCCC >Mature Secondary Structure AVIVLASASGSPGVSTTALGLTLNWHRPVLLVDADPTGSSSVFAGYFQGAQEPTGGLIN EEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEHHHHCCCCCCCCCEEE LALSLREGTLADALPRETLLLDPEAPAERSAWFLPGIRAHEQAPSLLPLWEPLTEQLRAL EEEEECCCCHHHHCCCCEEEECCCCCCCCCEEECCCCCCHHCCCCCCCCHHHHHHHHHHH DRNGQDVIVDAGRLGLAGWPQPLIAASDLTLLVTRSSLPALAGATSWAKTLRAQFAAVGG CCCCCEEEEECCCCCCCCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC LSRLGGFLVDEERRWPSLPTGARVRPYTARHIAKALQIPVVASVDWEPAVAEVYSHGARK HHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC PRKFESSGLRRGYRGSTAAIQSILGANQAALAPTNGGHA CCHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA