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The map label for this gene is ynjB [H]

Identifier: 119716299

GI number: 119716299

Start: 2213140

End: 2214414

Strand: Direct

Name: ynjB [H]

Synonym: Noca_2068

Alternate gene names: 119716299

Gene position: 2213140-2214414 (Clockwise)

Preceding gene: 119716298

Following gene: 119716300

Centisome position: 44.39

GC content: 70.51

Gene sequence:

>1275_bases
ATGCCAGGAATCACATTGCGGCCGAGCCGGCCCGTCCCGGCGCGCCGATCCCTGCGCTGGGCCGCCGTCGCAGCCGCCGC
GACGTTGGGCCTGGCCGCCTGCGGCAACGGCGCCGCGTCGACGGCGCCGTCGGCGGGGGTGGACGCCACGGACTGGAGAA
GCGTGGTGACGGCGGCCGACGGCCAGACCGTCAACTGGTACATGTGGGGCGGCGACTCCACTCTCAACGACTTCGTCAAC
GGGTACCTCTCCGACCAGCTCGCCAAGCAGGGCGTCACGCTGAACCAGGTCCCGATCGACGACACGGTGCAGGCCATCGA
CACCGTTCTCGGCGAGACCCAGGCCGGACGGGACGAGGGTTCGGTCGACCTCGTCTGGGTCAACGGCGAGAACTTCGCCA
CCGGCAAGCAGGCCGACCTGTGGTGGTGCCACTGGCCCTCCCAGCTGCCCAGTGCCAGCTTCGTCGACTTCACCGACGAC
GCGGTGACCCACGACTTCGGCGCGCCGGTCGAGGACTGCGAGGCTGCCTGGCAGCGAGCCGACTCCGCGCTCGTGTACCG
GTCCGACCGGATCCGCGCCGCCGACGTGGCCTCGATCAGCGCGCTGTTCGACTGGGCCGCCGCTCATCCCGGAAGGTTCA
CCTACCCCGCGCCGCCGGACTTCACGGGCTCGATGGCGGTGCGCACGATCCTCTACGACACGATCGGGGGACCGGACAGT
CTCCTCGGGGTGTTCGACGAGGACAAGTACGCGAGCGCGGCGCCGCAGCTGTGGCGGCGCCTGGACGACCTGCGTCCTTC
ACTGTGGCGGCAGGGGACGACCTATCCCCAGAGCCAGGCGCAGGTCGAGCAGATGTACGCAGACGGCGAGATCGACGCCT
ACTTCACCTACGGACCCGGAGCGATCGGGGACAAGGTCGCCAAGGGGATCTACCCCGCCGCGACCCGCGAGGCGGTTCCC
TCGGTCGGCAACATCGGCAACGTCAGCTTCGTGGCCATCCCGAAGAACGCTGCGCACCCGGCTGCCGCGCTGGTGCTCGC
CAATCTCCTGCAGGATCCGCAGACCCAGCTCGAGCTCTACCGCGCCACCGGGGCCTACCCCGCCGTCGACCTGGACAAGG
TGCCCCCCGCCGTCCGGGCGGACTTCGCGGCCGTGCCGTCGAGTGAAGCGGTGCTGCCGCTGGACGAGCTGAGCGCCCGC
GGGCAGCCCGAGCTGGCCAGCGACTACGTCACCAGGCTGGAGCGGGACTGGAAGACCGAGGTGCTGCAGAGGTGA

Upstream 100 bases:

>100_bases
TCGCCTCGGGCATCCGGCTCCTCACGCTGACGGAGAGCACGGCGCCGGCCCCTGCTGGCGTCCCATCCCACCGCTGACAC
CGGACAAGGAGAACACCCCG

Downstream 100 bases:

>100_bases
GCTCCCAGGTCGGCAGGACCGCCCTGGCGATCCGGCTCCTTCCGGCGCTCGCGGTCATCACGGTCTTCCTCGGCGCGGGC
ATGTGGTTCGCCGTCGCCCA

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MPGITLRPSRPVPARRSLRWAAVAAAATLGLAACGNGAASTAPSAGVDATDWRSVVTAADGQTVNWYMWGGDSTLNDFVN
GYLSDQLAKQGVTLNQVPIDDTVQAIDTVLGETQAGRDEGSVDLVWVNGENFATGKQADLWWCHWPSQLPSASFVDFTDD
AVTHDFGAPVEDCEAAWQRADSALVYRSDRIRAADVASISALFDWAAAHPGRFTYPAPPDFTGSMAVRTILYDTIGGPDS
LLGVFDEDKYASAAPQLWRRLDDLRPSLWRQGTTYPQSQAQVEQMYADGEIDAYFTYGPGAIGDKVAKGIYPAATREAVP
SVGNIGNVSFVAIPKNAAHPAAALVLANLLQDPQTQLELYRATGAYPAVDLDKVPPAVRADFAAVPSSEAVLPLDELSAR
GQPELASDYVTRLERDWKTEVLQR

Sequences:

>Translated_424_residues
MPGITLRPSRPVPARRSLRWAAVAAAATLGLAACGNGAASTAPSAGVDATDWRSVVTAADGQTVNWYMWGGDSTLNDFVN
GYLSDQLAKQGVTLNQVPIDDTVQAIDTVLGETQAGRDEGSVDLVWVNGENFATGKQADLWWCHWPSQLPSASFVDFTDD
AVTHDFGAPVEDCEAAWQRADSALVYRSDRIRAADVASISALFDWAAAHPGRFTYPAPPDFTGSMAVRTILYDTIGGPDS
LLGVFDEDKYASAAPQLWRRLDDLRPSLWRQGTTYPQSQAQVEQMYADGEIDAYFTYGPGAIGDKVAKGIYPAATREAVP
SVGNIGNVSFVAIPKNAAHPAAALVLANLLQDPQTQLELYRATGAYPAVDLDKVPPAVRADFAAVPSSEAVLPLDELSAR
GQPELASDYVTRLERDWKTEVLQR
>Mature_423_residues
PGITLRPSRPVPARRSLRWAAVAAAATLGLAACGNGAASTAPSAGVDATDWRSVVTAADGQTVNWYMWGGDSTLNDFVNG
YLSDQLAKQGVTLNQVPIDDTVQAIDTVLGETQAGRDEGSVDLVWVNGENFATGKQADLWWCHWPSQLPSASFVDFTDDA
VTHDFGAPVEDCEAAWQRADSALVYRSDRIRAADVASISALFDWAAAHPGRFTYPAPPDFTGSMAVRTILYDTIGGPDSL
LGVFDEDKYASAAPQLWRRLDDLRPSLWRQGTTYPQSQAQVEQMYADGEIDAYFTYGPGAIGDKVAKGIYPAATREAVPS
VGNIGNVSFVAIPKNAAHPAAALVLANLLQDPQTQLELYRATGAYPAVDLDKVPPAVRADFAAVPSSEAVLPLDELSARG
QPELASDYVTRLERDWKTEVLQR

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=377, Percent_Identity=34.4827586206897, Blast_Score=177, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45547; Mature: 45416

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGITLRPSRPVPARRSLRWAAVAAAATLGLAACGNGAASTAPSAGVDATDWRSVVTAAD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEECC
GQTVNWYMWGGDSTLNDFVNGYLSDQLAKQGVTLNQVPIDDTVQAIDTVLGETQAGRDEG
CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCCCCC
SVDLVWVNGENFATGKQADLWWCHWPSQLPSASFVDFTDDAVTHDFGAPVEDCEAAWQRA
CEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHC
DSALVYRSDRIRAADVASISALFDWAAAHPGRFTYPAPPDFTGSMAVRTILYDTIGGPDS
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
LLGVFDEDKYASAAPQLWRRLDDLRPSLWRQGTTYPQSQAQVEQMYADGEIDAYFTYGPG
HEECCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCC
AIGDKVAKGIYPAATREAVPSVGNIGNVSFVAIPKNAAHPAAALVLANLLQDPQTQLELY
HHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHH
RATGAYPAVDLDKVPPAVRADFAAVPSSEAVLPLDELSARGQPELASDYVTRLERDWKTE
HHCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
VLQR
HHCC
>Mature Secondary Structure 
PGITLRPSRPVPARRSLRWAAVAAAATLGLAACGNGAASTAPSAGVDATDWRSVVTAAD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEECC
GQTVNWYMWGGDSTLNDFVNGYLSDQLAKQGVTLNQVPIDDTVQAIDTVLGETQAGRDEG
CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCCCCC
SVDLVWVNGENFATGKQADLWWCHWPSQLPSASFVDFTDDAVTHDFGAPVEDCEAAWQRA
CEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHC
DSALVYRSDRIRAADVASISALFDWAAAHPGRFTYPAPPDFTGSMAVRTILYDTIGGPDS
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
LLGVFDEDKYASAAPQLWRRLDDLRPSLWRQGTTYPQSQAQVEQMYADGEIDAYFTYGPG
HEECCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCC
AIGDKVAKGIYPAATREAVPSVGNIGNVSFVAIPKNAAHPAAALVLANLLQDPQTQLELY
HHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHH
RATGAYPAVDLDKVPPAVRADFAAVPSSEAVLPLDELSARGQPELASDYVTRLERDWKTE
HHCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
VLQR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]