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The map label for this gene is ynjF [H]

Identifier: 119716298

GI number: 119716298

Start: 2212469

End: 2213116

Strand: Direct

Name: ynjF [H]

Synonym: Noca_2067

Alternate gene names: 119716298

Gene position: 2212469-2213116 (Clockwise)

Preceding gene: 119716297

Following gene: 119716299

Centisome position: 44.37

GC content: 69.29

Gene sequence:

>648_bases
ATGCTTGACGCTCGGGTCCGTCGCGTCATCGCGCCGAGCCTCGACACGATCGCGGCCGGTCTCGACCGAGCCGGCGTCAA
GCCGATGTGGCTCACCGTCGGGGGCCTCGGCGCAGGGCTGGGCGCGTGTGCTGCGGTGGCGACGGGCCAGTGGAGCGTCG
GCCTGGTGTTGTGGCTGGTCAACAGGGTGTTGGACGGCTTGGACGGCCCCGTCGCCCGGAGGAACGGGGCCACCGAGCTC
GGCGGCTTCCTGGACATCGTCTTCGACTTCACGGTGTACGGCGGCTTCGTGGTGGCGGTCGCTGTCGCGGTCCCGGAAGC
GCGCTTTGCGGCACTGAGCCTGATGCTGGCCTACTACATCTCGGGGACCGCCCTGCTGTCGTTGTCCTCGCTGTTGGAGA
AGCGTCGCATCGACGCAGGCCACGACGGCCGCTCGATCAGGTTCACCGGAGGCTTGGCCGAAGGCACCGAGACCGTTCTC
GTCTACGTGCTCATCGCGCTGCTACCCGGTCGCGCCGAGACCGTGCTCTGGATCTTCACCATCGTGGTCACCCTCACCGC
CGTGCAGCGCATCGCCTCGGGCATCCGGCTCCTCACGCTGACGGAGAGCACGGCGCCGGCCCCTGCTGGCGTCCCATCCC
ACCGCTGA

Upstream 100 bases:

>100_bases
TCCCACGGGCACCGCTCGGTGGCATTCGTCCGATGCAGTGCCCACGCCTGCCAGGAGTACGCGGCACCGTGGGCGCTCGT
ACTGGCTACGGTGGCCGATC

Downstream 100 bases:

>100_bases
CACCGGACAAGGAGAACACCCCGATGCCAGGAATCACATTGCGGCCGAGCCGGCCCGTCCCGGCGCGCCGATCCCTGCGC
TGGGCCGCCGTCGCAGCCGC

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MLDARVRRVIAPSLDTIAAGLDRAGVKPMWLTVGGLGAGLGACAAVATGQWSVGLVLWLVNRVLDGLDGPVARRNGATEL
GGFLDIVFDFTVYGGFVVAVAVAVPEARFAALSLMLAYYISGTALLSLSSLLEKRRIDAGHDGRSIRFTGGLAEGTETVL
VYVLIALLPGRAETVLWIFTIVVTLTAVQRIASGIRLLTLTESTAPAPAGVPSHR

Sequences:

>Translated_215_residues
MLDARVRRVIAPSLDTIAAGLDRAGVKPMWLTVGGLGAGLGACAAVATGQWSVGLVLWLVNRVLDGLDGPVARRNGATEL
GGFLDIVFDFTVYGGFVVAVAVAVPEARFAALSLMLAYYISGTALLSLSSLLEKRRIDAGHDGRSIRFTGGLAEGTETVL
VYVLIALLPGRAETVLWIFTIVVTLTAVQRIASGIRLLTLTESTAPAPAGVPSHR
>Mature_215_residues
MLDARVRRVIAPSLDTIAAGLDRAGVKPMWLTVGGLGAGLGACAAVATGQWSVGLVLWLVNRVLDGLDGPVARRNGATEL
GGFLDIVFDFTVYGGFVVAVAVAVPEARFAALSLMLAYYISGTALLSLSSLLEKRRIDAGHDGRSIRFTGGLAEGTETVL
VYVLIALLPGRAETVLWIFTIVVTLTAVQRIASGIRLLTLTESTAPAPAGVPSHR

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=196, Percent_Identity=38.265306122449, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 22468; Mature: 22468

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDARVRRVIAPSLDTIAAGLDRAGVKPMWLTVGGLGAGLGACAAVATGQWSVGLVLWLV
CCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHH
NRVLDGLDGPVARRNGATELGGFLDIVFDFTVYGGFVVAVAVAVPEARFAALSLMLAYYI
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SGTALLSLSSLLEKRRIDAGHDGRSIRFTGGLAEGTETVLVYVLIALLPGRAETVLWIFT
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
IVVTLTAVQRIASGIRLLTLTESTAPAPAGVPSHR
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MLDARVRRVIAPSLDTIAAGLDRAGVKPMWLTVGGLGAGLGACAAVATGQWSVGLVLWLV
CCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHH
NRVLDGLDGPVARRNGATELGGFLDIVFDFTVYGGFVVAVAVAVPEARFAALSLMLAYYI
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SGTALLSLSSLLEKRRIDAGHDGRSIRFTGGLAEGTETVLVYVLIALLPGRAETVLWIFT
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
IVVTLTAVQRIASGIRLLTLTESTAPAPAGVPSHR
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]