| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716236
Identifier: 119716236
GI number: 119716236
Start: 2145858
End: 2146562
Strand: Reverse
Name: 119716236
Synonym: Noca_2004
Alternate gene names: NA
Gene position: 2146562-2145858 (Counterclockwise)
Preceding gene: 119716238
Following gene: 119716235
Centisome position: 43.05
GC content: 79.29
Gene sequence:
>705_bases GTGTGGGCGCGCGCCCTGGTGCTCGGCGCCGTGATGCTGGGCACCGGGACGGTCTCGCACGCGTCGGCGGGCGGCCGGAT CCCCCACCCGGTCGCGCTGCTGGTCCTCACCGCGGCGCTCGTCGTGCTGGCCGGGCGGTTCCTGCTCGGGCCGGCGTCCA CCCGCCGCATCGTGGTCCTCGTCGTCGCCGGACAGGGCCTGGCCCACACGGCGCTCTCGGCCCTCGCCGGCCACCGTGAC GACGGAGGTACGGCGGCCCCACGGCACCTGTCCGTCCCCGCCACGAGCTTGCCGGTCGACGCCGACGGCCGGCGGGTCGG GTCGCTCCTCGACGCCTACACGTCCATGCCCGCGATGGCGGGCCACGACCGGCCCGGCGTACCCACCGCGCCGCTGACCC ACCTGCTGCACCACCTGGCCGACCAGGGCCCCCTCATGCTGGCCGCCCACCTGGCCGCGGCCGTCGCCCTCGGCCTGCTC CTGGCCGTCGGCGAGCGCGCCCTGTGGGCGCTGCTGCACCTGGCGGCGGCCCGCGTCGTCGTGCTCGCCGCGGCCCGGCG CAGCGCGGCCGCGACCCTGGCGGTCCTGCGCGGCGCCGCGACCGCGCCCCGGCCCCGGCCTCGACGGGCCGGCTTCACCC CGATCCCCCGCCTGGACCGACCGGCGCTCTCGCACCGCGGCCCACCTGCGCTCCTCGCTTCCTGA
Upstream 100 bases:
>100_bases CGCGCCCGCTCCCGAGCCACCCGAGCCCTCCCGGAGAACCGCGATCCCGCCCGCTCCCGCGACCGCTGTCGCACCTGCAG CCACCGCGCCGCCGTTCCTG
Downstream 100 bases:
>100_bases CCGTCGCTGAGTCCCACGGACCCGCCCCACGGCGCCGGTCCGGCGCACCCGCGCGCCCATCCCCAGACACCCCAGACACC CCAGACACCGGGAGAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MWARALVLGAVMLGTGTVSHASAGGRIPHPVALLVLTAALVVLAGRFLLGPASTRRIVVLVVAGQGLAHTALSALAGHRD DGGTAAPRHLSVPATSLPVDADGRRVGSLLDAYTSMPAMAGHDRPGVPTAPLTHLLHHLADQGPLMLAAHLAAAVALGLL LAVGERALWALLHLAAARVVVLAAARRSAAATLAVLRGAATAPRPRPRRAGFTPIPRLDRPALSHRGPPALLAS
Sequences:
>Translated_234_residues MWARALVLGAVMLGTGTVSHASAGGRIPHPVALLVLTAALVVLAGRFLLGPASTRRIVVLVVAGQGLAHTALSALAGHRD DGGTAAPRHLSVPATSLPVDADGRRVGSLLDAYTSMPAMAGHDRPGVPTAPLTHLLHHLADQGPLMLAAHLAAAVALGLL LAVGERALWALLHLAAARVVVLAAARRSAAATLAVLRGAATAPRPRPRRAGFTPIPRLDRPALSHRGPPALLAS >Mature_234_residues MWARALVLGAVMLGTGTVSHASAGGRIPHPVALLVLTAALVVLAGRFLLGPASTRRIVVLVVAGQGLAHTALSALAGHRD DGGTAAPRHLSVPATSLPVDADGRRVGSLLDAYTSMPAMAGHDRPGVPTAPLTHLLHHLADQGPLMLAAHLAAAVALGLL LAVGERALWALLHLAAARVVVLAAARRSAAATLAVLRGAATAPRPRPRRAGFTPIPRLDRPALSHRGPPALLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23766; Mature: 23766
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWARALVLGAVMLGTGTVSHASAGGRIPHPVALLVLTAALVVLAGRFLLGPASTRRIVVL CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VVAGQGLAHTALSALAGHRDDGGTAAPRHLSVPATSLPVDADGRRVGSLLDAYTSMPAMA EECCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC GHDRPGVPTAPLTHLLHHLADQGPLMLAAHLAAAVALGLLLAVGERALWALLHLAAARVV CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAAARRSAAATLAVLRGAATAPRPRPRRAGFTPIPRLDRPALSHRGPPALLAS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure MWARALVLGAVMLGTGTVSHASAGGRIPHPVALLVLTAALVVLAGRFLLGPASTRRIVVL CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VVAGQGLAHTALSALAGHRDDGGTAAPRHLSVPATSLPVDADGRRVGSLLDAYTSMPAMA EECCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC GHDRPGVPTAPLTHLLHHLADQGPLMLAAHLAAAVALGLLLAVGERALWALLHLAAARVV CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAAARRSAAATLAVLRGAATAPRPRPRRAGFTPIPRLDRPALSHRGPPALLAS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA