Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716235

Identifier: 119716235

GI number: 119716235

Start: 2145205

End: 2145753

Strand: Reverse

Name: 119716235

Synonym: Noca_2003

Alternate gene names: NA

Gene position: 2145753-2145205 (Counterclockwise)

Preceding gene: 119716236

Following gene: 119716234

Centisome position: 43.04

GC content: 73.41

Gene sequence:

>549_bases
ATGACGAACCCTGCTGCGCGCCGCCCCTGGACGCGCACCCTGATGCCCGCGCTGGCGCTCGCGCTCGCGTTGCCCCTGCT
CACCGGCTGCGGTGAGGACGAGGCCCCCGCCGCGGCCGCGGAGGCCGGCGCCCTGACGATCGAGGACCCCTGGGTCCGGG
CCACCACCGGCACCGAGGACCCGACCATGACGGCCGCGTTCCTGGTCATCGACAACGAGACCGAGGAGGACGTCACCCTC
GAGAGCGCCACGTCCCCGGCGGCGCCGATGGTCCAGATCCACGAGATGGCCGAGGTGGACGGCGAGATGGTGATGCGCGA
GGCCGAGGACGGCGTCCTGGTCCGCGCGGGCGGTGGCCAGCTGCTGCAGCCCGGCGGCTACCACCTGATGCTGATGGACC
TCGAGGACGAGCTGGCCGCCGGCGCCGAGGTCGACCTCGCGCTGACCTTCTCCGACGGCACCACCCTGGAGGTCACCGCG
CCGGTGAAGGAGTTCACCGAGGACGGCGGCCACTACCACGCGCCCGGCACCGGGGAGCACGAGCACTGA

Upstream 100 bases:

>100_bases
CGCTGAGTCCCACGGACCCGCCCCACGGCGCCGGTCCGGCGCACCCGCGCGCCCATCCCCAGACACCCCAGACACCCCAG
ACACCGGGAGAGAAGTACCC

Downstream 100 bases:

>100_bases
TGGCCGGATCCGAGACATCCGCCCGGTCCGGATTCGGCCGGCGGCGGTTCCTCGGGTACGCCGGGTCAGCGGTCGCGGGT
GCGGCCGCCGGCACGGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MTNPAARRPWTRTLMPALALALALPLLTGCGEDEAPAAAAEAGALTIEDPWVRATTGTEDPTMTAAFLVIDNETEEDVTL
ESATSPAAPMVQIHEMAEVDGEMVMREAEDGVLVRAGGGQLLQPGGYHLMLMDLEDELAAGAEVDLALTFSDGTTLEVTA
PVKEFTEDGGHYHAPGTGEHEH

Sequences:

>Translated_182_residues
MTNPAARRPWTRTLMPALALALALPLLTGCGEDEAPAAAAEAGALTIEDPWVRATTGTEDPTMTAAFLVIDNETEEDVTL
ESATSPAAPMVQIHEMAEVDGEMVMREAEDGVLVRAGGGQLLQPGGYHLMLMDLEDELAAGAEVDLALTFSDGTTLEVTA
PVKEFTEDGGHYHAPGTGEHEH
>Mature_181_residues
TNPAARRPWTRTLMPALALALALPLLTGCGEDEAPAAAAEAGALTIEDPWVRATTGTEDPTMTAAFLVIDNETEEDVTLE
SATSPAAPMVQIHEMAEVDGEMVMREAEDGVLVRAGGGQLLQPGGYHLMLMDLEDELAAGAEVDLALTFSDGTTLEVTAP
VKEFTEDGGHYHAPGTGEHEH

Specific function: Unknown

COG id: COG2847

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007410 [H]

Pfam domain/function: PF04314 DUF461 [H]

EC number: NA

Molecular weight: Translated: 19166; Mature: 19034

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPAARRPWTRTLMPALALALALPLLTGCGEDEAPAAAAEAGALTIEDPWVRATTGTED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEECCCEEEEECCCCC
PTMTAAFLVIDNETEEDVTLESATSPAAPMVQIHEMAEVDGEMVMREAEDGVLVRAGGGQ
CCEEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHEEEECCCCEEEEECCCC
LLQPGGYHLMLMDLEDELAAGAEVDLALTFSDGTTLEVTAPVKEFTEDGGHYHAPGTGEH
EECCCCCEEEEEECCHHHCCCCEEEEEEEECCCCEEEEECCHHHHHHCCCEECCCCCCCC
EH
CC
>Mature Secondary Structure 
TNPAARRPWTRTLMPALALALALPLLTGCGEDEAPAAAAEAGALTIEDPWVRATTGTED
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEECCCEEEEECCCCC
PTMTAAFLVIDNETEEDVTLESATSPAAPMVQIHEMAEVDGEMVMREAEDGVLVRAGGGQ
CCEEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHEEEECCCCEEEEECCCC
LLQPGGYHLMLMDLEDELAAGAEVDLALTFSDGTTLEVTAPVKEFTEDGGHYHAPGTGEH
EECCCCCEEEEEECCHHHCCCCEEEEEEEECCCCEEEEECCHHHHHHCCCEECCCCCCCC
EH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA