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The map label for this gene is ykoG [H]

Identifier: 119716238

GI number: 119716238

Start: 2148057

End: 2148728

Strand: Reverse

Name: ykoG [H]

Synonym: Noca_2006

Alternate gene names: 119716238

Gene position: 2148728-2148057 (Counterclockwise)

Preceding gene: 119716239

Following gene: 119716236

Centisome position: 43.1

GC content: 71.43

Gene sequence:

>672_bases
GTGGCCAGGATCCTGATCGTCGAGGACGAGGAGCGGATCGCGTCGTTCCTGGCCAAGGGGCTGCGCGCCGACGGCCACGT
GACGACCTGCGTGGCGGACGGCCGTGAGGGGCTCGACCTGGCGCTCGGCGGCGACGTCGACCTGGTCGTGCTCGACATCG
GGCTGCCCGGGATGGACGGCTTCGAGGTGCTCGACCAGCTGCGCTCCCAGGGCTCCACGGTCCCGGTCATCGTGCTGACC
GCCCGCGACTCGGTCGGCGACACCGTCTCCGCGCTCGAGGGCGGCGCCGACGACTACATGCCCAAGCCGTTCCGCTTCGC
CGAGCTGCTCGCGAGGGTCCGGCTGCGGCTGCGGCAGAGCGCCGACGCGGGCGGGGCGTCGCGAGAGGACGTGCTGCAGT
CCGGCCGGGTCAAGCTGGACGTACGGACCCGGCGCGCCGTGGTCGAGGACCGGCAGGTCGACCTGTCGGCCCGGGAGTTC
TCGCTCGCGGAGATCTTCATGGTCAACGCCGGCCAGGTGCTCTCCCGCGAGCAGCTGCTCGACCACGTCTGGGGGATGGA
CTTCGACCCCGGCTCGAACGTGGTCGACGTGTACGTCGGCTATCTGCGCAAGAAGCTCGGCGCCGACACCATCGCCACCG
TCCGGGGCATGGGGTACCGCTTCAACCGCTGA

Upstream 100 bases:

>100_bases
GGTCGCACGGCGGCGGCGTCGAGGTCGAGGACGCCGAGGAGACCGCCCCCCGCGGTGCTCGGTTCGTCATGACGCTGCCC
GCGCCACCGAAGGAGGACCC

Downstream 100 bases:

>100_bases
CTCGGCCTCAGGAGGCCTTGAAGGCTCCGGCCAGCCGCGCGGCCGGGAGCCGGTCGAGGACCGGTTCGAGCGCCTCGGCC
AGCTCGTGGGGCAGCGGGCG

Product: response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MARILIVEDEERIASFLAKGLRADGHVTTCVADGREGLDLALGGDVDLVVLDIGLPGMDGFEVLDQLRSQGSTVPVIVLT
ARDSVGDTVSALEGGADDYMPKPFRFAELLARVRLRLRQSADAGGASREDVLQSGRVKLDVRTRRAVVEDRQVDLSAREF
SLAEIFMVNAGQVLSREQLLDHVWGMDFDPGSNVVDVYVGYLRKKLGADTIATVRGMGYRFNR

Sequences:

>Translated_223_residues
MARILIVEDEERIASFLAKGLRADGHVTTCVADGREGLDLALGGDVDLVVLDIGLPGMDGFEVLDQLRSQGSTVPVIVLT
ARDSVGDTVSALEGGADDYMPKPFRFAELLARVRLRLRQSADAGGASREDVLQSGRVKLDVRTRRAVVEDRQVDLSAREF
SLAEIFMVNAGQVLSREQLLDHVWGMDFDPGSNVVDVYVGYLRKKLGADTIATVRGMGYRFNR
>Mature_222_residues
ARILIVEDEERIASFLAKGLRADGHVTTCVADGREGLDLALGGDVDLVVLDIGLPGMDGFEVLDQLRSQGSTVPVIVLTA
RDSVGDTVSALEGGADDYMPKPFRFAELLARVRLRLRQSADAGGASREDVLQSGRVKLDVRTRRAVVEDRQVDLSAREFS
LAEIFMVNAGQVLSREQLLDHVWGMDFDPGSNVVDVYVGYLRKKLGADTIATVRGMGYRFNR

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=41.7040358744395, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=40.7239819004525, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=40.5529953917051, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=39.3805309734513, Blast_Score=143, Evalue=8e-36,
Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=35.9447004608295, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=35.2422907488987, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=36.283185840708, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=33.9285714285714, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=36.6515837104072, Blast_Score=118, Evalue=2e-28,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=34.3478260869565, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=32.034632034632, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=34.6491228070175, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787229, Length=220, Percent_Identity=31.8181818181818, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=34.1880341880342, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=41.1214953271028, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787487, Length=103, Percent_Identity=36.8932038834951, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1790299, Length=110, Percent_Identity=35.4545454545455, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1790437, Length=108, Percent_Identity=34.2592592592593, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24352; Mature: 24221

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARILIVEDEERIASFLAKGLRADGHVTTCVADGREGLDLALGGDVDLVVLDIGLPGMDG
CEEEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCEEEEEEEECCCCCCH
FEVLDQLRSQGSTVPVIVLTARDSVGDTVSALEGGADDYMPKPFRFAELLARVRLRLRQS
HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
ADAGGASREDVLQSGRVKLDVRTRRAVVEDRQVDLSAREFSLAEIFMVNAGQVLSREQLL
CCCCCCCHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHHHHHH
DHVWGMDFDPGSNVVDVYVGYLRKKLGADTIATVRGMGYRFNR
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEECCC
>Mature Secondary Structure 
ARILIVEDEERIASFLAKGLRADGHVTTCVADGREGLDLALGGDVDLVVLDIGLPGMDG
EEEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCEEEEEEEECCCCCCH
FEVLDQLRSQGSTVPVIVLTARDSVGDTVSALEGGADDYMPKPFRFAELLARVRLRLRQS
HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
ADAGGASREDVLQSGRVKLDVRTRRAVVEDRQVDLSAREFSLAEIFMVNAGQVLSREQLL
CCCCCCCHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHHHHHH
DHVWGMDFDPGSNVVDVYVGYLRKKLGADTIATVRGMGYRFNR
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]