| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716230
Identifier: 119716230
GI number: 119716230
Start: 2137927
End: 2140326
Strand: Direct
Name: 119716230
Synonym: Noca_1998
Alternate gene names: NA
Gene position: 2137927-2140326 (Clockwise)
Preceding gene: 119716229
Following gene: 119716231
Centisome position: 42.88
GC content: 74.75
Gene sequence:
>2400_bases GTGGCCGAACGACTCTCGGGACGGCATGTCCTGCTGACCGGCGTCACCGGGTTCGTGGGCGAGGCGTTGCTGCACCTGCT GCTCTCCGACGTGCCCGGTGTACGGGTGACGGTGCTGGTCCGGCCCAAGGGCTCGACCAGCGCGTCGAGCCGGACGGCGG CGCTGCTCGGCAAGCCGATCTTCGCGGGGATCGTCGAGGCCGCGGGCGGGGTGGAGCAGCTGATGGCTGCCCGGGTGGGC GTGCTCGAGGGCGACCTCGCCGACGTGCCCCCGCTGCCGGGCGGGCTGGACGCGGTGGTGCACTGCGCCGGCGACGTGTC CTTCGACCCGCCGGTCGACGAGGGGTTCCGCACCAACGTGCTCGGCACCCGGGACCTGATCCGCAGGATCCAGGAGGTCG ACGGCCCGGACCGACCCGACGACCAGCGGGTCCACTACGTGCACATCTCCACGGCGTACGTCGCCGGCCGGCGCCGTGGG TCGATCCCCGAGGGGCCGGTCGAGCACGACGTCGACCTCGAGGCCGAGCTCGCCTGGGGGCTGGCGCAGCGCCGGCAGAT CGAGCACCAGAGCCGCACCGCGTTCGTGCTCGAGCGGGAGCGCCGGAAGGCGGAGAAGGCGCACAGCCGCGCCGGCATGC TCACCGCGGCGAGCGCCACCGAGGCCGCCCGCAAGGAGTGGGTCAAACGCGAGCTGGTGCGGGTCGGCACCGAGCGGGCC CGGAGCCTGGGCTGGACCGACTGCTACACGTTCACCAAGGCGCTCGGCGAGCGGGTGGTCGAGGCGCACGCGGCCACGGC CCGGGTCTCGATCGTCCGGCCCAGCATCATCGAATCGGCGCTCGTCACCCCGCACCCCGGGTGGATCGAGGGCTTCAAGA TGGCCGAGCCGCTGATCCTCGCCTATGGGCGCGGCGAGCTGCCGGAGTTCCCCGCGGCCGCGGACACCATCGTCGACATC GTGCCGGTCGACCACGTCGTGGCGGCGGTCGTCGCCGTGCTCGCCCACCCGCCCGAGGTCGGCGCGCCGGCGTACTTCCA CGTCTCGTCCGGCGACCGCAACCCGCTCACGTTCCGCGAGCTCTACGGCAACGTGCGCGCCTACTTCGACGAGCACCCGT TCGCCGCCGGCGACCGCGGCGCCGCGCGGCTGCCGGACTGGCGCTTCCCGGGCGCCCAGTCGGTCGAGCGGCTGCTGAGC ACCAGCGAGCGCGCGCACCGGGTCGCCGACTACCTGGTCGGGCGGACGCCGCGCAGCGACCGGGCCCGCGAGCTGGCCCG CAAGCTGGACCAGCAGGGCCGGCGCCTGGAGTTCCTGCGCCGCTACCTCGACCTCTACCACGAGTACGCGCAGGCCGAGC TGCGGTTCTCCGACACCCGCACGGTCGCGCTCTACGCGTCGCTGTCGCCCGAGGACCGCGAGCGGTTCGCGTTCGACACC GCCGTCGTCGACTGGGCGCACTACCTGCGCGAGGTGCACTGCCCGGCGGTCACCGCGCCGGTGCGGCGGATGGACGAGGC CCGCCGGGCCCGCAAGCGCAACGCCGACCTCGGCCTCAAGCCACTTGAACCCCGCTCCGCGCCAGCGGAGCCCGACCGAC GGCGAGCGGAGCGAGCCTGGTCGGTCGGAACGGAAGGCACGGGGAGCGAAGCGACCTCCACGCCTTCGGGGGGTCCACGG GGGGCGGAGCCCCCCGTGTGTGCAGCCTTCTTCGACATGGACGGCACCCTGCTCTCGTCCAACGTGATCGAGACCTACCT GTGGCTGCGGCTGCGCGAGCAGTCCGGCTCCGAGCGGCTCACCGAGATCGGCCGGGTGGCGGGTCGGCTGCCGGCCCTGG TGCGCGCCGAGCGCCGCGAGCGCAGCGCCTTCCTGCGGGCCGTCTACCGCGAGTACGCCGGGGCCCGCCTGGCGGACCTC GAGGCGGTGGCGGACGCCCACCTGACCGACCACGTGCTGGCGCGCCTGTCCCCGGACGCCGTGCGCCGGATCCGCGAGCA CCGGGCGGCCGGCCACCACACGGTGCTGATCACCGGCGCGATCCGGCCGCTGACCCGGCCGCTCGCGCCGCTGTTCGACC ACATCGAGGCCGCCGAGCTGGCCGTGGACGACCGCGGGGTGTGCACCGGCCACCTCGCGGCCTCGCCGCTGGTGGGGGAG TCGCGCGCGGCCTGGATGCGGCAGTACGCCGCCGCCCGGGGGCTCGACCTGGCTGCGTCGTACGGATATGCGGACTCGCA CTCCGACCTCCCGCTGCTGGAGGCGGTCGGCCGCCCGGTGGCGGTGCGGCCCGACGTGCCGCTGTTCCGGCATGCGCGCA GGCACCGGTGGACGATCGTCGACTGGGCCAGCTCGACCTCCAGCACCCGCACCCTCAACCCGGCCGGCCCCCGGTCATGA
Upstream 100 bases:
>100_bases AGCCCGCCGCGTCTGGCCCTGACGCAGGCGCGCCCCAGCGCACGGCTACTCGCCGGTACTCGCCGGACAGGGCACAATCC CTCGCGTGACGGTGGCATCG
Downstream 100 bases:
>100_bases GGAGCCTGTCGTGATGCTCGCGCTGGAGATGTTCCGGTCGGTCTCGCGGACCATGGCCGGCAAGGCGATCGGCGGCCGGA TGCCCGGCGTGCTGTCCGGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 799; Mature: 798
Protein sequence:
>799_residues MAERLSGRHVLLTGVTGFVGEALLHLLLSDVPGVRVTVLVRPKGSTSASSRTAALLGKPIFAGIVEAAGGVEQLMAARVG VLEGDLADVPPLPGGLDAVVHCAGDVSFDPPVDEGFRTNVLGTRDLIRRIQEVDGPDRPDDQRVHYVHISTAYVAGRRRG SIPEGPVEHDVDLEAELAWGLAQRRQIEHQSRTAFVLERERRKAEKAHSRAGMLTAASATEAARKEWVKRELVRVGTERA RSLGWTDCYTFTKALGERVVEAHAATARVSIVRPSIIESALVTPHPGWIEGFKMAEPLILAYGRGELPEFPAAADTIVDI VPVDHVVAAVVAVLAHPPEVGAPAYFHVSSGDRNPLTFRELYGNVRAYFDEHPFAAGDRGAARLPDWRFPGAQSVERLLS TSERAHRVADYLVGRTPRSDRARELARKLDQQGRRLEFLRRYLDLYHEYAQAELRFSDTRTVALYASLSPEDRERFAFDT AVVDWAHYLREVHCPAVTAPVRRMDEARRARKRNADLGLKPLEPRSAPAEPDRRRAERAWSVGTEGTGSEATSTPSGGPR GAEPPVCAAFFDMDGTLLSSNVIETYLWLRLREQSGSERLTEIGRVAGRLPALVRAERRERSAFLRAVYREYAGARLADL EAVADAHLTDHVLARLSPDAVRRIREHRAAGHHTVLITGAIRPLTRPLAPLFDHIEAAELAVDDRGVCTGHLAASPLVGE SRAAWMRQYAAARGLDLAASYGYADSHSDLPLLEAVGRPVAVRPDVPLFRHARRHRWTIVDWASSTSSTRTLNPAGPRS
Sequences:
>Translated_799_residues MAERLSGRHVLLTGVTGFVGEALLHLLLSDVPGVRVTVLVRPKGSTSASSRTAALLGKPIFAGIVEAAGGVEQLMAARVG VLEGDLADVPPLPGGLDAVVHCAGDVSFDPPVDEGFRTNVLGTRDLIRRIQEVDGPDRPDDQRVHYVHISTAYVAGRRRG SIPEGPVEHDVDLEAELAWGLAQRRQIEHQSRTAFVLERERRKAEKAHSRAGMLTAASATEAARKEWVKRELVRVGTERA RSLGWTDCYTFTKALGERVVEAHAATARVSIVRPSIIESALVTPHPGWIEGFKMAEPLILAYGRGELPEFPAAADTIVDI VPVDHVVAAVVAVLAHPPEVGAPAYFHVSSGDRNPLTFRELYGNVRAYFDEHPFAAGDRGAARLPDWRFPGAQSVERLLS TSERAHRVADYLVGRTPRSDRARELARKLDQQGRRLEFLRRYLDLYHEYAQAELRFSDTRTVALYASLSPEDRERFAFDT AVVDWAHYLREVHCPAVTAPVRRMDEARRARKRNADLGLKPLEPRSAPAEPDRRRAERAWSVGTEGTGSEATSTPSGGPR GAEPPVCAAFFDMDGTLLSSNVIETYLWLRLREQSGSERLTEIGRVAGRLPALVRAERRERSAFLRAVYREYAGARLADL EAVADAHLTDHVLARLSPDAVRRIREHRAAGHHTVLITGAIRPLTRPLAPLFDHIEAAELAVDDRGVCTGHLAASPLVGE SRAAWMRQYAAARGLDLAASYGYADSHSDLPLLEAVGRPVAVRPDVPLFRHARRHRWTIVDWASSTSSTRTLNPAGPRS >Mature_798_residues AERLSGRHVLLTGVTGFVGEALLHLLLSDVPGVRVTVLVRPKGSTSASSRTAALLGKPIFAGIVEAAGGVEQLMAARVGV LEGDLADVPPLPGGLDAVVHCAGDVSFDPPVDEGFRTNVLGTRDLIRRIQEVDGPDRPDDQRVHYVHISTAYVAGRRRGS IPEGPVEHDVDLEAELAWGLAQRRQIEHQSRTAFVLERERRKAEKAHSRAGMLTAASATEAARKEWVKRELVRVGTERAR SLGWTDCYTFTKALGERVVEAHAATARVSIVRPSIIESALVTPHPGWIEGFKMAEPLILAYGRGELPEFPAAADTIVDIV PVDHVVAAVVAVLAHPPEVGAPAYFHVSSGDRNPLTFRELYGNVRAYFDEHPFAAGDRGAARLPDWRFPGAQSVERLLST SERAHRVADYLVGRTPRSDRARELARKLDQQGRRLEFLRRYLDLYHEYAQAELRFSDTRTVALYASLSPEDRERFAFDTA VVDWAHYLREVHCPAVTAPVRRMDEARRARKRNADLGLKPLEPRSAPAEPDRRRAERAWSVGTEGTGSEATSTPSGGPRG AEPPVCAAFFDMDGTLLSSNVIETYLWLRLREQSGSERLTEIGRVAGRLPALVRAERRERSAFLRAVYREYAGARLADLE AVADAHLTDHVLARLSPDAVRRIREHRAAGHHTVLITGAIRPLTRPLAPLFDHIEAAELAVDDRGVCTGHLAASPLVGES RAAWMRQYAAARGLDLAASYGYADSHSDLPLLEAVGRPVAVRPDVPLFRHARRHRWTIVDWASSTSSTRTLNPAGPRS
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI31542658, Length=253, Percent_Identity=28.8537549407115, Blast_Score=109, Evalue=1e-23, Organism=Homo sapiens, GI24308324, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17570463, Length=245, Percent_Identity=24.0816326530612, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI24648302, Length=365, Percent_Identity=25.4794520547945, Blast_Score=113, Evalue=5e-25, Organism=Drosophila melanogaster, GI281363511, Length=248, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI281363509, Length=248, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI24654209, Length=248, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI28573762, Length=278, Percent_Identity=23.7410071942446, Blast_Score=83, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87792; Mature: 87661
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS01228 COF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERLSGRHVLLTGVTGFVGEALLHLLLSDVPGVRVTVLVRPKGSTSASSRTAALLGKPI CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHCCHH FAGIVEAAGGVEQLMAARVGVLEGDLADVPPLPGGLDAVVHCAGDVSFDPPVDEGFRTNV HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC LGTRDLIRRIQEVDGPDRPDDQRVHYVHISTAYVAGRRRGSIPEGPVEHDVDLEAELAWG CCHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH LAQRRQIEHQSRTAFVLERERRKAEKAHSRAGMLTAASATEAARKEWVKRELVRVGTERA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RSLGWTDCYTFTKALGERVVEAHAATARVSIVRPSIIESALVTPHPGWIEGFKMAEPLIL HHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHCCCCCCCHHCCHHHCCCEEE AYGRGELPEFPAAADTIVDIVPVDHVVAAVVAVLAHPPEVGAPAYFHVSSGDRNPLTFRE EECCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHH LYGNVRAYFDEHPFAAGDRGAARLPDWRFPGAQSVERLLSTSERAHRVADYLVGRTPRSD HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RARELARKLDQQGRRLEFLRRYLDLYHEYAQAELRFSDTRTVALYASLSPEDRERFAFDT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCHHHHHHHHH AVVDWAHYLREVHCPAVTAPVRRMDEARRARKRNADLGLKPLEPRSAPAEPDRRRAERAW HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH SVGTEGTGSEATSTPSGGPRGAEPPVCAAFFDMDGTLLSSNVIETYLWLRLREQSGSERL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHH TEIGRVAGRLPALVRAERRERSAFLRAVYREYAGARLADLEAVADAHLTDHVLARLSPDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH VRRIREHRAAGHHTVLITGAIRPLTRPLAPLFDHIEAAELAVDDRGVCTGHLAASPLVGE HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCC SRAAWMRQYAAARGLDLAASYGYADSHSDLPLLEAVGRPVAVRPDVPLFRHARRHRWTIV HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHCCCCEEECCCCHHHHHHHHCCEEEE DWASSTSSTRTLNPAGPRS EECCCCCCCCCCCCCCCCC >Mature Secondary Structure AERLSGRHVLLTGVTGFVGEALLHLLLSDVPGVRVTVLVRPKGSTSASSRTAALLGKPI CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHCCHH FAGIVEAAGGVEQLMAARVGVLEGDLADVPPLPGGLDAVVHCAGDVSFDPPVDEGFRTNV HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC LGTRDLIRRIQEVDGPDRPDDQRVHYVHISTAYVAGRRRGSIPEGPVEHDVDLEAELAWG CCHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH LAQRRQIEHQSRTAFVLERERRKAEKAHSRAGMLTAASATEAARKEWVKRELVRVGTERA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RSLGWTDCYTFTKALGERVVEAHAATARVSIVRPSIIESALVTPHPGWIEGFKMAEPLIL HHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHCCCCCCCHHCCHHHCCCEEE AYGRGELPEFPAAADTIVDIVPVDHVVAAVVAVLAHPPEVGAPAYFHVSSGDRNPLTFRE EECCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHH LYGNVRAYFDEHPFAAGDRGAARLPDWRFPGAQSVERLLSTSERAHRVADYLVGRTPRSD HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RARELARKLDQQGRRLEFLRRYLDLYHEYAQAELRFSDTRTVALYASLSPEDRERFAFDT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCHHHHHHHHH AVVDWAHYLREVHCPAVTAPVRRMDEARRARKRNADLGLKPLEPRSAPAEPDRRRAERAW HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH SVGTEGTGSEATSTPSGGPRGAEPPVCAAFFDMDGTLLSSNVIETYLWLRLREQSGSERL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHH TEIGRVAGRLPALVRAERRERSAFLRAVYREYAGARLADLEAVADAHLTDHVLARLSPDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH VRRIREHRAAGHHTVLITGAIRPLTRPLAPLFDHIEAAELAVDDRGVCTGHLAASPLVGE HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCC SRAAWMRQYAAARGLDLAASYGYADSHSDLPLLEAVGRPVAVRPDVPLFRHARRHRWTIV HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHCCCCEEECCCCHHHHHHHHCCEEEE DWASSTSSTRTLNPAGPRS EECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA