| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is gutB [H]
Identifier: 119716231
GI number: 119716231
Start: 2140340
End: 2141527
Strand: Direct
Name: gutB [H]
Synonym: Noca_1999
Alternate gene names: 119716231
Gene position: 2140340-2141527 (Clockwise)
Preceding gene: 119716230
Following gene: 119716232
Centisome position: 42.93
GC content: 75.76
Gene sequence:
>1188_bases ATGCTCGCGCTGGAGATGTTCCGGTCGGTCTCGCGGACCATGGCCGGCAAGGCGATCGGCGGCCGGATGCCCGGCGTGCT GTCCGGCTTCGCCGCGCCGCTGCGGCTGGTCACCATCGACGAGCCGCGGGTCGAGCGGCCCGGCTGGGCGCGGCTGCGCA CCCGGCTCTCCGGCATCTGCGGCTCCGACCTGGGCGCGCTCTCGGGCCGCACCAGCCTGTACTTCTCCGCGGTCGTGTCG CTGCCGTTCGTGCCCGGGCACGAGGTGGTCGCCGAGCTGCTGGACGACTGCGAGGACCTGCCGGCCGGCACCCGCGTCGT GGTCGACCCCGTGCTGGGCTGCGCCGCGCGGGGTGTCGAGCCGTGCGAGGCGTGCGCGGCCGGCGCGACCAACCGGTGCG CCCGGATCACCGTCGGGCACCTCTCACCCGGCCTGCAGACCGGGTTCTGCCACGACACCGGCGGCGGCTGGGGCCAGCAG CTGGCCGCCCACCGCAGCCAGCTCCACCCGGTCCCGGAGGGCTTCTCCGACGAGCAGGCGATCCTGATCGAGCCGGTGGC CTGCGCCGTGCACACGGCGCTGCGCGCCGGGGTCGCCGCCGGCGACCGGGTGCTGGTCAGCGGGGCCGGGTCGGTCGGGC TGTTCGCCACGCTCGCGCTGCGCGAGCTCACCGAGGCGGGCGAGATCATCGTGGTCGCCAAGCACCCCCACCAGCGCGAG CTGGCCCGCGAGCTGGGCGCGACCGAGGTCGTCGCGCCGGGCGAGGTGCTGCGGCGGGTACGCCGCTCCACGGGCGCCTT CCAGCTCGAGCCGGAGTTCTCCACGCCGTACCTCCTCGGCGGCGTCGACGTCGCCGTCGACGCGGTCGGGAGCAAGCAGT CGCTGGAGAGTGCCCTCCAGGCCACCCGGGCCGGGGGCCGGGTGGTGCTGTCCGGCATGCCCGCCGCCGCCGACCTGTCC GCCGCCTGGTTCCGCGAGCTCGAGGTGGTCGGCACCTACGCCTCGTCCCGCTCCGACGACGCGTTCGGGAGGGCGACCGA GCTGGTCGCCACCGACGCCGTCCAGCAGCTTGCCAAGAGCGTCGCCAGCTATCCGCTGCACCGGTGGCGCGAGGCGCTCG ACCACGCCCACTCGGCCGGCCGGCTCGGCACGGTCAAGGTGGCCTTCGACCCCCGCTCGTCCCACTGA
Upstream 100 bases:
>100_bases GCGCGCAGGCACCGGTGGACGATCGTCGACTGGGCCAGCTCGACCTCCAGCACCCGCACCCTCAACCCGGCCGGCCCCCG GTCATGAGGAGCCTGTCGTG
Downstream 100 bases:
>100_bases GGAGCACACATTGAGCAGGCCAGGTTTCGTCCTCGAGGTGGACGACCGCACCCCGCCGTTGGTCGTCCACGAGGGCCTCG GCTTCCGGCTGGAGAGCTTC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MLALEMFRSVSRTMAGKAIGGRMPGVLSGFAAPLRLVTIDEPRVERPGWARLRTRLSGICGSDLGALSGRTSLYFSAVVS LPFVPGHEVVAELLDDCEDLPAGTRVVVDPVLGCAARGVEPCEACAAGATNRCARITVGHLSPGLQTGFCHDTGGGWGQQ LAAHRSQLHPVPEGFSDEQAILIEPVACAVHTALRAGVAAGDRVLVSGAGSVGLFATLALRELTEAGEIIVVAKHPHQRE LARELGATEVVAPGEVLRRVRRSTGAFQLEPEFSTPYLLGGVDVAVDAVGSKQSLESALQATRAGGRVVLSGMPAAADLS AAWFRELEVVGTYASSRSDDAFGRATELVATDAVQQLAKSVASYPLHRWREALDHAHSAGRLGTVKVAFDPRSSH
Sequences:
>Translated_395_residues MLALEMFRSVSRTMAGKAIGGRMPGVLSGFAAPLRLVTIDEPRVERPGWARLRTRLSGICGSDLGALSGRTSLYFSAVVS LPFVPGHEVVAELLDDCEDLPAGTRVVVDPVLGCAARGVEPCEACAAGATNRCARITVGHLSPGLQTGFCHDTGGGWGQQ LAAHRSQLHPVPEGFSDEQAILIEPVACAVHTALRAGVAAGDRVLVSGAGSVGLFATLALRELTEAGEIIVVAKHPHQRE LARELGATEVVAPGEVLRRVRRSTGAFQLEPEFSTPYLLGGVDVAVDAVGSKQSLESALQATRAGGRVVLSGMPAAADLS AAWFRELEVVGTYASSRSDDAFGRATELVATDAVQQLAKSVASYPLHRWREALDHAHSAGRLGTVKVAFDPRSSH >Mature_395_residues MLALEMFRSVSRTMAGKAIGGRMPGVLSGFAAPLRLVTIDEPRVERPGWARLRTRLSGICGSDLGALSGRTSLYFSAVVS LPFVPGHEVVAELLDDCEDLPAGTRVVVDPVLGCAARGVEPCEACAAGATNRCARITVGHLSPGLQTGFCHDTGGGWGQQ LAAHRSQLHPVPEGFSDEQAILIEPVACAVHTALRAGVAAGDRVLVSGAGSVGLFATLALRELTEAGEIIVVAKHPHQRE LARELGATEVVAPGEVLRRVRRSTGAFQLEPEFSTPYLLGGVDVAVDAVGSKQSLESALQATRAGGRVVLSGMPAAADLS AAWFRELEVVGTYASSRSDDAFGRATELVATDAVQQLAKSVASYPLHRWREALDHAHSAGRLGTVKVAFDPRSSH
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=340, Percent_Identity=27.0588235294118, Blast_Score=92, Evalue=7e-19, Organism=Escherichia coli, GI1790718, Length=339, Percent_Identity=27.4336283185841, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI226510992, Length=331, Percent_Identity=27.190332326284, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1790045, Length=291, Percent_Identity=26.8041237113402, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787863, Length=227, Percent_Identity=28.6343612334802, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082125, Length=331, Percent_Identity=26.8882175226586, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788073, Length=294, Percent_Identity=23.1292517006803, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788075, Length=381, Percent_Identity=24.4094488188976, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786825, Length=226, Percent_Identity=27.8761061946903, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562876, Length=361, Percent_Identity=26.0387811634349, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562878, Length=353, Percent_Identity=25.4957507082153, Blast_Score=82, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6323099, Length=349, Percent_Identity=24.9283667621776, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319955, Length=360, Percent_Identity=25.8333333333333, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322619, Length=360, Percent_Identity=25.8333333333333, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6319258, Length=294, Percent_Identity=26.1904761904762, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6319257, Length=302, Percent_Identity=27.4834437086093, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323961, Length=350, Percent_Identity=25.7142857142857, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324486, Length=346, Percent_Identity=26.5895953757225, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI17737897, Length=347, Percent_Identity=28.8184438040346, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI17137530, Length=306, Percent_Identity=30.0653594771242, Blast_Score=83, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 41401; Mature: 41401
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALEMFRSVSRTMAGKAIGGRMPGVLSGFAAPLRLVTIDEPRVERPGWARLRTRLSGIC CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCC GSDLGALSGRTSLYFSAVVSLPFVPGHEVVAELLDDCEDLPAGTRVVVDPVLGCAARGVE CCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCC PCEACAAGATNRCARITVGHLSPGLQTGFCHDTGGGWGQQLAAHRSQLHPVPEGFSDEQA HHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCE ILIEPVACAVHTALRAGVAAGDRVLVSGAGSVGLFATLALRELTEAGEIIVVAKHPHQRE EEECHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHH LARELGATEVVAPGEVLRRVRRSTGAFQLEPEFSTPYLLGGVDVAVDAVGSKQSLESALQ HHHHCCCCCEECCHHHHHHHHHHCCCEEECCCCCCCEEECCHHHHHHCCCCHHHHHHHHH ATRAGGRVVLSGMPAAADLSAAWFRELEVVGTYASSRSDDAFGRATELVATDAVQQLAKS HHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VASYPLHRWREALDHAHSAGRLGTVKVAFDPRSSH HHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCC >Mature Secondary Structure MLALEMFRSVSRTMAGKAIGGRMPGVLSGFAAPLRLVTIDEPRVERPGWARLRTRLSGIC CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCC GSDLGALSGRTSLYFSAVVSLPFVPGHEVVAELLDDCEDLPAGTRVVVDPVLGCAARGVE CCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCC PCEACAAGATNRCARITVGHLSPGLQTGFCHDTGGGWGQQLAAHRSQLHPVPEGFSDEQA HHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCE ILIEPVACAVHTALRAGVAAGDRVLVSGAGSVGLFATLALRELTEAGEIIVVAKHPHQRE EEECHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHH LARELGATEVVAPGEVLRRVRRSTGAFQLEPEFSTPYLLGGVDVAVDAVGSKQSLESALQ HHHHCCCCCEECCHHHHHHHHHHCCCEEECCCCCCCEEECCHHHHHHCCCCHHHHHHHHH ATRAGGRVVLSGMPAAADLSAAWFRELEVVGTYASSRSDDAFGRATELVATDAVQQLAKS HHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VASYPLHRWREALDHAHSAGRLGTVKVAFDPRSSH HHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1460002; 9384377; 8195086 [H]