Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119716173

Identifier: 119716173

GI number: 119716173

Start: 2071545

End: 2072315

Strand: Direct

Name: 119716173

Synonym: Noca_1941

Alternate gene names: NA

Gene position: 2071545-2072315 (Clockwise)

Preceding gene: 119716172

Following gene: 119716174

Centisome position: 41.55

GC content: 72.5

Gene sequence:

>771_bases
ATGCACAATGACCGAATGATCCGGCTCACCACACTGCTCGGGGCCGCCGTCGCGGGCGCGCTCGCTCTCGGCGGCTGCTC
GGGATCCGACGAGGGCGCCCAGCCCGAGGAGCAGAGCACGCTCACGGTGCCGCCCGCCTCGACCGGGGCGACGCCGTACC
TCCCGGTGCCCGACGGCGTCGAGCTCACCGAGCCGGGCAGCCAGCTCGCGGTCGGCGACCACGCGGTCGTGGCCTACCAC
CCGCGCCAGGAGCAGGTCGGCGCGCTCGACATCGCCGTCACCAGGCTCGAGAAGACCTCGATCAAGGACTTCTCGGCCTG
GCAGCTCAGCGACGCCCAGAAGGCGTCGACGCCCTACTACGTGCGGGCCCGGGTCGAGAACGTCGGCGACACCGACCTCG
GCGGCCGGCCGGTGCCGCTCTACGTCGTCAACGAGGACAACGTGCTGCTCGAGCCGACGCCGTTCGCGAGCTCCTTCCAG
GCCTGCCCGAGCACGCCGTTCCCGGAGAAGTTCGCGCCGGGCGACACGGCGCGGGTGTGCCTGGTCTACCTGGCGCCCGA
CCACGGCGACCTCGTGTCGGTGAGCTTCCGTCCCGAGGAGACCTTCAACCCGATCACCTGGAGCGGCGACGTGGCGAAGT
ACGAAGCACCGCAGGCGGACCAGCCCAAGAGCGGGACGCAGGGCAAGGGTGGGACTCGGGGCGGAAAGGCCGACCCCAAG
GCCGGCAAGGGCGGCACCCGGGCCGGCAAGGGCGGCACCCGCGGCGGCTGA

Upstream 100 bases:

>100_bases
CACCGTCCGCGAGCGCGACAGCATGCAGCAGGAGCGGATCGGCCTGGACCGGATCAGCGCGTACTTCGCCGAGCGTCTGA
TCGGCTGCTGACCGCTCGGC

Downstream 100 bases:

>100_bases
GCCCGATTTGGGGCGCCGGACGGCGGCCCCGGACAATGGCTGCATGTCCTCGCCCACCTCACCGACCGGCAGTCCGGCCG
GGGGGCTGGCCCTGGGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MHNDRMIRLTTLLGAAVAGALALGGCSGSDEGAQPEEQSTLTVPPASTGATPYLPVPDGVELTEPGSQLAVGDHAVVAYH
PRQEQVGALDIAVTRLEKTSIKDFSAWQLSDAQKASTPYYVRARVENVGDTDLGGRPVPLYVVNEDNVLLEPTPFASSFQ
ACPSTPFPEKFAPGDTARVCLVYLAPDHGDLVSVSFRPEETFNPITWSGDVAKYEAPQADQPKSGTQGKGGTRGGKADPK
AGKGGTRAGKGGTRGG

Sequences:

>Translated_256_residues
MHNDRMIRLTTLLGAAVAGALALGGCSGSDEGAQPEEQSTLTVPPASTGATPYLPVPDGVELTEPGSQLAVGDHAVVAYH
PRQEQVGALDIAVTRLEKTSIKDFSAWQLSDAQKASTPYYVRARVENVGDTDLGGRPVPLYVVNEDNVLLEPTPFASSFQ
ACPSTPFPEKFAPGDTARVCLVYLAPDHGDLVSVSFRPEETFNPITWSGDVAKYEAPQADQPKSGTQGKGGTRGGKADPK
AGKGGTRAGKGGTRGG
>Mature_256_residues
MHNDRMIRLTTLLGAAVAGALALGGCSGSDEGAQPEEQSTLTVPPASTGATPYLPVPDGVELTEPGSQLAVGDHAVVAYH
PRQEQVGALDIAVTRLEKTSIKDFSAWQLSDAQKASTPYYVRARVENVGDTDLGGRPVPLYVVNEDNVLLEPTPFASSFQ
ACPSTPFPEKFAPGDTARVCLVYLAPDHGDLVSVSFRPEETFNPITWSGDVAKYEAPQADQPKSGTQGKGGTRGGKADPK
AGKGGTRAGKGGTRGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26689; Mature: 26689

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNDRMIRLTTLLGAAVAGALALGGCSGSDEGAQPEEQSTLTVPPASTGATPYLPVPDGV
CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCC
ELTEPGSQLAVGDHAVVAYHPRQEQVGALDIAVTRLEKTSIKDFSAWQLSDAQKASTPYY
EECCCCCEEEECCEEEEEECCCHHHCCEEEEEEEEHHHHCCCCCCEEECCCHHHCCCCEE
VRARVENVGDTDLGGRPVPLYVVNEDNVLLEPTPFASSFQACPSTPFPEKFAPGDTARVC
EEEEECCCCCCCCCCCCEEEEEECCCCEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEE
LVYLAPDHGDLVSVSFRPEETFNPITWSGDVAKYEAPQADQPKSGTQGKGGTRGGKADPK
EEEECCCCCCEEEEEECCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
AGKGGTRAGKGGTRGG
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHNDRMIRLTTLLGAAVAGALALGGCSGSDEGAQPEEQSTLTVPPASTGATPYLPVPDGV
CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCC
ELTEPGSQLAVGDHAVVAYHPRQEQVGALDIAVTRLEKTSIKDFSAWQLSDAQKASTPYY
EECCCCCEEEECCEEEEEECCCHHHCCEEEEEEEEHHHHCCCCCCEEECCCHHHCCCCEE
VRARVENVGDTDLGGRPVPLYVVNEDNVLLEPTPFASSFQACPSTPFPEKFAPGDTARVC
EEEEECCCCCCCCCCCCEEEEEECCCCEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEE
LVYLAPDHGDLVSVSFRPEETFNPITWSGDVAKYEAPQADQPKSGTQGKGGTRGGKADPK
EEEECCCCCCEEEEEECCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
AGKGGTRAGKGGTRGG
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA