| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715936
Identifier: 119715936
GI number: 119715936
Start: 1807126
End: 1807650
Strand: Reverse
Name: 119715936
Synonym: Noca_1701
Alternate gene names: NA
Gene position: 1807650-1807126 (Counterclockwise)
Preceding gene: 119715937
Following gene: 119715935
Centisome position: 36.26
GC content: 72.0
Gene sequence:
>525_bases ATGACCGTCAGCAGACTCATCGCCCGCCCCATGCTCGCCTCCGCCTTCCTGGTCGGAGCGGCCAACGCCTTGAAGAACGC CTCGGTACCAGCCGGCAAGGCGGAGCCCGTCATCAGCCGTCTCGTCCCGCTCGCCAAGCGCGCCGGCGTCCCGCTGCCGG AGGACCCGGAGAAGCTGGTCAAGCTCAACGCCGGGATCCAGATCGGTGCCGGCCTCGCTCTTGCCACCGGACGCGCCCCC CGGCTCTCGGCTGCGGTGCTCGCCGCCTCCCTGGTGCCGACGACCGCGGCCGGTCACCGCTTCTGGGAGGTCCAGGACCC GACGCAGCGCACCCAGCAGAAGCTGCACTTCTTCAAGAACCTCTCGATGCTGGGCGGGCTGCTGATCGCCGCAGGCGACA CCGACGGCAAGCCGGGCGTCGCCTGGCGGGCCCGCCACGCCGCCAAGGACGCCCGGCGTCAGGCCAGGCACCTCGCCAGC ACCGCACGCCAGGAGGCCAAGCTCGCCAAGGCCAAGGTCGCCTGA
Upstream 100 bases:
>100_bases CGCTGCCCACGATCTCGGTCGGGGTCCCGGTCGGTCCCTGAGCGGGCGGCTACGGGGCCGACCTCGGGTAAGAACCGGCC GGCTCGGGTAAGAAGGAGCC
Downstream 100 bases:
>100_bases CCCCGGCCGTCGATAGGGTGCGGGGGTGACGACGCCCCCCGACTCCTTGGCGGACCCCTGGCTCGCACCCCGGGCGCGGC GCCCCGTCGACGCGGTCGTC
Product: DoxX family protein
Products: NA
Alternate protein names: DoxX Protein; DoxX Subfamily Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTVSRLIARPMLASAFLVGAANALKNASVPAGKAEPVISRLVPLAKRAGVPLPEDPEKLVKLNAGIQIGAGLALATGRAP RLSAAVLAASLVPTTAAGHRFWEVQDPTQRTQQKLHFFKNLSMLGGLLIAAGDTDGKPGVAWRARHAAKDARRQARHLAS TARQEAKLAKAKVA
Sequences:
>Translated_174_residues MTVSRLIARPMLASAFLVGAANALKNASVPAGKAEPVISRLVPLAKRAGVPLPEDPEKLVKLNAGIQIGAGLALATGRAP RLSAAVLAASLVPTTAAGHRFWEVQDPTQRTQQKLHFFKNLSMLGGLLIAAGDTDGKPGVAWRARHAAKDARRQARHLAS TARQEAKLAKAKVA >Mature_173_residues TVSRLIARPMLASAFLVGAANALKNASVPAGKAEPVISRLVPLAKRAGVPLPEDPEKLVKLNAGIQIGAGLALATGRAPR LSAAVLAASLVPTTAAGHRFWEVQDPTQRTQQKLHFFKNLSMLGGLLIAAGDTDGKPGVAWRARHAAKDARRQARHLAST ARQEAKLAKAKVA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18227; Mature: 18095
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSRLIARPMLASAFLVGAANALKNASVPAGKAEPVISRLVPLAKRAGVPLPEDPEKLV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH KLNAGIQIGAGLALATGRAPRLSAAVLAASLVPTTAAGHRFWEVQDPTQRTQQKLHFFKN HHCCCEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHH LSMLGGLLIAAGDTDGKPGVAWRARHAAKDARRQARHLASTARQEAKLAKAKVA HHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVSRLIARPMLASAFLVGAANALKNASVPAGKAEPVISRLVPLAKRAGVPLPEDPEKLV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH KLNAGIQIGAGLALATGRAPRLSAAVLAASLVPTTAAGHRFWEVQDPTQRTQQKLHFFKN HHCCCEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHH LSMLGGLLIAAGDTDGKPGVAWRARHAAKDARRQARHLASTARQEAKLAKAKVA HHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA