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The map label for this gene is 119715937

Identifier: 119715937

GI number: 119715937

Start: 1807710

End: 1809110

Strand: Reverse

Name: 119715937

Synonym: Noca_1702

Alternate gene names: NA

Gene position: 1809110-1807710 (Counterclockwise)

Preceding gene: 119715943

Following gene: 119715936

Centisome position: 36.28

GC content: 77.09

Gene sequence:

>1401_bases
GTGATCTTTTCCGGGGTGGCGCGTTGGTCGGATGTGGCCAGCCACGTCTCCACTCTCGAGGGCCCCAGCGACGGAGAGCT
GATCTCCGCCGTCCGGGGCGGCGACACCGACGCCTACGGTGAGCTCTTCGCACGCCACGTCGAGGCTGCCCGGCGCCTGG
CGCGGCAGCTCGTCCCCTCCGGCGAGGTCGACGATCTCGTCTCCGAGGCGTTCGCCAAGGTGCTGGTCGTGCTGCAGCGC
GGCGGCGGGCCGGACCTCGCCTTCCGCGCCTACCTCCTCACGGCGGTACGCCGCCTCCAGGTCGACCGGATCCGGGCCAC
GGCCCGGCTGCAGACCACCGGCGACCTCACCCCGTTCGACCCCGGGGTGCCGTTCCGGGACACGGCGGTCGAGGGCTTCG
AGAGCGCCACCGCTGCCCGCGCGTTCGCGTCCCTGCCCGAGCGGTGGCAGCTGGTGCTCTGGCACACGGAGGTCGAGGAG
CAGAAGCCGGCGGAGGTCGCCCTGCTGCTGGGCATGAGCCCCAACTCGGTCTCCGCCCTCGCCTACCGGGCCCGCGAGGG
GCTGCGCCAGGCCTACCTGTCGATGCACACCCAGGACGTCGAGGACGACGCCTGCGCCCGGACCCGCGCCCAGCTCGGCG
CCTACGTCCGCGGCGGCCTGTCCCGCCGCGACACGGCCCGGGTCGAGCAGCACCTCGAGGAGTGCCGGCGCTGCACGGCG
ATCTACCTCGAGCTCACGGAGGTCAACTCGGGGCTCGGGGCCCTGCTCGCCCCGCTGCTGCTCGGCACCGCGGCCACGGC
GTACGTCGGCGCCACCACCGGGGGGCTGTCCGCGGCCACCGGCGGCGTCGCCGTGCTGATCGGCCGCGCCCGCGACGCGG
TGGTCAGCCACGCCCCGACCGCTGCGGTCGCCGGCGCCGCCGCGTCCGTCGTCGTCGCCGGGCTGGTCGTGGCCCTGCAG
CACGAGCCGGGCGGGCAGCCGGCGGCCGAGGACAACCCCGTGGTGACGGTGGCGCCCTCGCTGACGGCCTCGGCCGGACC
CGGCCTCCCGCTGGGCCGGCGGCCCGCCGGCCCCGGGGCCGCGACCGGCACCACGACGTCGGCGGAGGCCACCGCCGGTC
CGGGCCGGCCCACGCCGGCGGCCGCCACCGAAGGGTCGGGACCGACCGCCGGGCCGACCGGAGGCCCCACCGACGGACCG
ACGAGTGGCCCCACCAGCGGACCGACCGAGGAGCCTTCCGCACCGCCCTCGGCGCCGCCCTCCGCGCCGCCTCAGTCACC
CCTGGTGCAGCTCGGCGTCGAGGCATCGGCCGGCCCTGACGGTGCCTCGGTGCAGGTCACCGGCGGCGTGGCGGGCGTGC
CGCTGCCCACGATCTCGGTCGGGGTCCCGGTCGGTCCCTGA

Upstream 100 bases:

>100_bases
GGCTCCCCCTCGGTTGGTCTGCGGGGATGGAACGGCCCGGGCGCGGGTCCATGACGCGGTTCACGCGAACTTCGTCACCA
TTTTTCTGCCGTCCGGTGCC

Downstream 100 bases:

>100_bases
GCGGGCGGCTACGGGGCCGACCTCGGGTAAGAACCGGCCGGCTCGGGTAAGAAGGAGCCATGACCGTCAGCAGACTCATC
GCCCGCCCCATGCTCGCCTC

Product: sigma-70 region 2 domain-containing protein

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-70 Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma Factor Domain-Containing Protein; Hydrolase; RNA Polymerase Sigma Factor Sigma-70 Family; Regulator; RNA Polymerase ECF-Type Sigma Factor; Hemagglutinin/Hemolysin-Related Protein; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MIFSGVARWSDVASHVSTLEGPSDGELISAVRGGDTDAYGELFARHVEAARRLARQLVPSGEVDDLVSEAFAKVLVVLQR
GGGPDLAFRAYLLTAVRRLQVDRIRATARLQTTGDLTPFDPGVPFRDTAVEGFESATAARAFASLPERWQLVLWHTEVEE
QKPAEVALLLGMSPNSVSALAYRAREGLRQAYLSMHTQDVEDDACARTRAQLGAYVRGGLSRRDTARVEQHLEECRRCTA
IYLELTEVNSGLGALLAPLLLGTAATAYVGATTGGLSAATGGVAVLIGRARDAVVSHAPTAAVAGAAASVVVAGLVVALQ
HEPGGQPAAEDNPVVTVAPSLTASAGPGLPLGRRPAGPGAATGTTTSAEATAGPGRPTPAAATEGSGPTAGPTGGPTDGP
TSGPTSGPTEEPSAPPSAPPSAPPQSPLVQLGVEASAGPDGASVQVTGGVAGVPLPTISVGVPVGP

Sequences:

>Translated_466_residues
MIFSGVARWSDVASHVSTLEGPSDGELISAVRGGDTDAYGELFARHVEAARRLARQLVPSGEVDDLVSEAFAKVLVVLQR
GGGPDLAFRAYLLTAVRRLQVDRIRATARLQTTGDLTPFDPGVPFRDTAVEGFESATAARAFASLPERWQLVLWHTEVEE
QKPAEVALLLGMSPNSVSALAYRAREGLRQAYLSMHTQDVEDDACARTRAQLGAYVRGGLSRRDTARVEQHLEECRRCTA
IYLELTEVNSGLGALLAPLLLGTAATAYVGATTGGLSAATGGVAVLIGRARDAVVSHAPTAAVAGAAASVVVAGLVVALQ
HEPGGQPAAEDNPVVTVAPSLTASAGPGLPLGRRPAGPGAATGTTTSAEATAGPGRPTPAAATEGSGPTAGPTGGPTDGP
TSGPTSGPTEEPSAPPSAPPSAPPQSPLVQLGVEASAGPDGASVQVTGGVAGVPLPTISVGVPVGP
>Mature_466_residues
MIFSGVARWSDVASHVSTLEGPSDGELISAVRGGDTDAYGELFARHVEAARRLARQLVPSGEVDDLVSEAFAKVLVVLQR
GGGPDLAFRAYLLTAVRRLQVDRIRATARLQTTGDLTPFDPGVPFRDTAVEGFESATAARAFASLPERWQLVLWHTEVEE
QKPAEVALLLGMSPNSVSALAYRAREGLRQAYLSMHTQDVEDDACARTRAQLGAYVRGGLSRRDTARVEQHLEECRRCTA
IYLELTEVNSGLGALLAPLLLGTAATAYVGATTGGLSAATGGVAVLIGRARDAVVSHAPTAAVAGAAASVVVAGLVVALQ
HEPGGQPAAEDNPVVTVAPSLTASAGPGLPLGRRPAGPGAATGTTTSAEATAGPGRPTPAAATEGSGPTAGPTGGPTDGP
TSGPTSGPTEEPSAPPSAPPSAPPQSPLVQLGVEASAGPDGASVQVTGGVAGVPLPTISVGVPVGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47048; Mature: 47048

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSGVARWSDVASHVSTLEGPSDGELISAVRGGDTDAYGELFARHVEAARRLARQLVPS
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GEVDDLVSEAFAKVLVVLQRGGGPDLAFRAYLLTAVRRLQVDRIRATARLQTTGDLTPFD
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
PGVPFRDTAVEGFESATAARAFASLPERWQLVLWHTEVEEQKPAEVALLLGMSPNSVSAL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHH
AYRAREGLRQAYLSMHTQDVEDDACARTRAQLGAYVRGGLSRRDTARVEQHLEECRRCTA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IYLELTEVNSGLGALLAPLLLGTAATAYVGATTGGLSAATGGVAVLIGRARDAVVSHAPT
HEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECHHHHHHHCCCH
AAVAGAAASVVVAGLVVALQHEPGGQPAAEDNPVVTVAPSLTASAGPGLPLGRRPAGPGA
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
ATGTTTSAEATAGPGRPTPAAATEGSGPTAGPTGGPTDGPTSGPTSGPTEEPSAPPSAPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAPPQSPLVQLGVEASAGPDGASVQVTGGVAGVPLPTISVGVPVGP
CCCCCCCHHEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MIFSGVARWSDVASHVSTLEGPSDGELISAVRGGDTDAYGELFARHVEAARRLARQLVPS
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GEVDDLVSEAFAKVLVVLQRGGGPDLAFRAYLLTAVRRLQVDRIRATARLQTTGDLTPFD
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
PGVPFRDTAVEGFESATAARAFASLPERWQLVLWHTEVEEQKPAEVALLLGMSPNSVSAL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHH
AYRAREGLRQAYLSMHTQDVEDDACARTRAQLGAYVRGGLSRRDTARVEQHLEECRRCTA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IYLELTEVNSGLGALLAPLLLGTAATAYVGATTGGLSAATGGVAVLIGRARDAVVSHAPT
HEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECHHHHHHHCCCH
AAVAGAAASVVVAGLVVALQHEPGGQPAAEDNPVVTVAPSLTASAGPGLPLGRRPAGPGA
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
ATGTTTSAEATAGPGRPTPAAATEGSGPTAGPTGGPTDGPTSGPTSGPTEEPSAPPSAPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAPPQSPLVQLGVEASAGPDGASVQVTGGVAGVPLPTISVGVPVGP
CCCCCCCHHEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA