| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is aroA [H]
Identifier: 119715935
GI number: 119715935
Start: 1805808
End: 1807100
Strand: Reverse
Name: aroA [H]
Synonym: Noca_1700
Alternate gene names: 119715935
Gene position: 1807100-1805808 (Counterclockwise)
Preceding gene: 119715936
Following gene: 119715934
Centisome position: 36.24
GC content: 74.09
Gene sequence:
>1293_bases GTGACGACGCCCCCCGACTCCTTGGCGGACCCCTGGCTCGCACCCCGGGCGCGGCGCCCCGTCGACGCGGTCGTCACGCT CCCGGGGAGCAAGTCGCTCACCAACCGCGCGCTCGTGCTGGCCGCGATGGCCGACGGGCCCTCCGTCGTACGCCGGGCGC TGCGCTCGCGCGACTCCATGCTGATGGCGGCCGCACTGACCGCACTGGGATCGCAGGTCGACACCACCGGTGCGGACTGG TTGGTGACGCCCGGCGCCTTCGACCGCGACGCCGCCGTCGACTGCGGCCTGGCGGGCACCGTGATGCGGTTCGTGCCGCC GGTCGCCGGGCTGTCGACCGGAGCGGTCTCCTTCGACGGCGACCCGCACATGCGCAAGCGGCCGATCGGCGAGATCCTCG GTGCGCTGCGCACCCTCGGCGTGTCGGTCGAGGGCGACACGCTGCCGTTCACGGTCCACGGCTCGGGCACGGTGCGGGGC GGGACGGTCGTGGTCGACGCCTCGGCCTCCTCGCAGTTCATCTCCGCGCTGCTCCTCGCGGGCGCGCGGTACGACCACGG CGTCGACGTACGCCACGACGGCAAGCCCGTGCCCTCCCTGCCGCACATCGACATGACCGTGGCGATGCTGCGCGAGCACG GGGTCGAGGTGGACGGCGCTGACGCGAACCGATGGCGGGTCGCGCCCGGCCCGGTCCGCGCCGTCGACCACCTGATCGAG CCGGACCTCTCCAACGCCGCGCCGTTCCTGGCCCTGGCGGCCGTGTCGGGAGGGACCGTGGTGGTCCGCGACTGGCCGCG CTCGACCACGCAGGCCGGCGACGCGCTGCGCGACATCCTCACCGCGATGGGCTGCGAAGTGGGTTTCGTCGACGGTCCGG ACAGCACCGGGCTGCGGGTCACCGGCAGCGGGACGCTGCTCGGCATCGACGTCGACCTGCACAACGTCGGCGAGCTCACG CCCGCGGTCGCGGCGCTGTGCGCGCTCGCCGAGGCGCCGTCGCACCTGCGCGGCATCGCGCACATCCGCGGCCACGAGAC CGACCGGCTCGCCGCCCTCGCGACGGAGCTCAGCGGGCTGGGCGCCGACGTCACCGAGCATGCCGACGGGCTGAGCATCC GGCCCGCCCCACTGCATGGCGGCGTGTTCCACACCTACGCGGACCACCGGATGGCACACGCCGGGGTGATCATCGGCGCC GCCGTCGAGGACGTGCTGGTCGAGAACGTCGCCACGACCGGCAAGACCTTCCCCGACTTCGCCGGCTTCTGGTCCGGGCT GATCGAGGAGTGA
Upstream 100 bases:
>100_bases GCCCGGCGTCAGGCCAGGCACCTCGCCAGCACCGCACGCCAGGAGGCCAAGCTCGCCAAGGCCAAGGTCGCCTGACCCCG GCCGTCGATAGGGTGCGGGG
Downstream 100 bases:
>100_bases GCGGGCGATGAGCCCCAAGGCGCGGGGACGCTACTCCGACCACGACGTCGAGCACTACGACCGTCCGCGCCGCCACACCC GTCCGCGCACCAAGGAGCGC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MTTPPDSLADPWLAPRARRPVDAVVTLPGSKSLTNRALVLAAMADGPSVVRRALRSRDSMLMAAALTALGSQVDTTGADW LVTPGAFDRDAAVDCGLAGTVMRFVPPVAGLSTGAVSFDGDPHMRKRPIGEILGALRTLGVSVEGDTLPFTVHGSGTVRG GTVVVDASASSQFISALLLAGARYDHGVDVRHDGKPVPSLPHIDMTVAMLREHGVEVDGADANRWRVAPGPVRAVDHLIE PDLSNAAPFLALAAVSGGTVVVRDWPRSTTQAGDALRDILTAMGCEVGFVDGPDSTGLRVTGSGTLLGIDVDLHNVGELT PAVAALCALAEAPSHLRGIAHIRGHETDRLAALATELSGLGADVTEHADGLSIRPAPLHGGVFHTYADHRMAHAGVIIGA AVEDVLVENVATTGKTFPDFAGFWSGLIEE
Sequences:
>Translated_430_residues MTTPPDSLADPWLAPRARRPVDAVVTLPGSKSLTNRALVLAAMADGPSVVRRALRSRDSMLMAAALTALGSQVDTTGADW LVTPGAFDRDAAVDCGLAGTVMRFVPPVAGLSTGAVSFDGDPHMRKRPIGEILGALRTLGVSVEGDTLPFTVHGSGTVRG GTVVVDASASSQFISALLLAGARYDHGVDVRHDGKPVPSLPHIDMTVAMLREHGVEVDGADANRWRVAPGPVRAVDHLIE PDLSNAAPFLALAAVSGGTVVVRDWPRSTTQAGDALRDILTAMGCEVGFVDGPDSTGLRVTGSGTLLGIDVDLHNVGELT PAVAALCALAEAPSHLRGIAHIRGHETDRLAALATELSGLGADVTEHADGLSIRPAPLHGGVFHTYADHRMAHAGVIIGA AVEDVLVENVATTGKTFPDFAGFWSGLIEE >Mature_429_residues TTPPDSLADPWLAPRARRPVDAVVTLPGSKSLTNRALVLAAMADGPSVVRRALRSRDSMLMAAALTALGSQVDTTGADWL VTPGAFDRDAAVDCGLAGTVMRFVPPVAGLSTGAVSFDGDPHMRKRPIGEILGALRTLGVSVEGDTLPFTVHGSGTVRGG TVVVDASASSQFISALLLAGARYDHGVDVRHDGKPVPSLPHIDMTVAMLREHGVEVDGADANRWRVAPGPVRAVDHLIEP DLSNAAPFLALAAVSGGTVVVRDWPRSTTQAGDALRDILTAMGCEVGFVDGPDSTGLRVTGSGTLLGIDVDLHNVGELTP AVAALCALAEAPSHLRGIAHIRGHETDRLAALATELSGLGADVTEHADGLSIRPAPLHGGVFHTYADHRMAHAGVIIGAA VEDVLVENVATTGKTFPDFAGFWSGLIEE
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=421, Percent_Identity=35.3919239904988, Blast_Score=187, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320332, Length=469, Percent_Identity=30.4904051172708, Blast_Score=147, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 44491; Mature: 44360
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPPDSLADPWLAPRARRPVDAVVTLPGSKSLTNRALVLAAMADGPSVVRRALRSRDSM CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH LMAAALTALGSQVDTTGADWLVTPGAFDRDAAVDCGLAGTVMRFVPPVAGLSTGAVSFDG HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECC DPHMRKRPIGEILGALRTLGVSVEGDTLPFTVHGSGTVRGGTVVVDASASSQFISALLLA CCCHHHCCHHHHHHHHHHHCCEECCCEEEEEEECCCEECCCEEEEECCCHHHHHHHHHHH GARYDHGVDVRHDGKPVPSLPHIDMTVAMLREHGVEVDGADANRWRVAPGPVRAVDHLIE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHC PDLSNAAPFLALAAVSGGTVVVRDWPRSTTQAGDALRDILTAMGCEVGFVDGPDSTGLRV CCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEE TGSGTLLGIDVDLHNVGELTPAVAALCALAEAPSHLRGIAHIRGHETDRLAALATELSGL ECCCEEEEEEECHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHCC GADVTEHADGLSIRPAPLHGGVFHTYADHRMAHAGVIIGAAVEDVLVENVATTGKTFPDF CCCHHHCCCCCEECCCCCCCCEEEHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCHH AGFWSGLIEE HHHHHHHHCC >Mature Secondary Structure TTPPDSLADPWLAPRARRPVDAVVTLPGSKSLTNRALVLAAMADGPSVVRRALRSRDSM CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH LMAAALTALGSQVDTTGADWLVTPGAFDRDAAVDCGLAGTVMRFVPPVAGLSTGAVSFDG HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECC DPHMRKRPIGEILGALRTLGVSVEGDTLPFTVHGSGTVRGGTVVVDASASSQFISALLLA CCCHHHCCHHHHHHHHHHHCCEECCCEEEEEEECCCEECCCEEEEECCCHHHHHHHHHHH GARYDHGVDVRHDGKPVPSLPHIDMTVAMLREHGVEVDGADANRWRVAPGPVRAVDHLIE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHC PDLSNAAPFLALAAVSGGTVVVRDWPRSTTQAGDALRDILTAMGCEVGFVDGPDSTGLRV CCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEE TGSGTLLGIDVDLHNVGELTPAVAALCALAEAPSHLRGIAHIRGHETDRLAALATELSGL ECCCEEEEEEECHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHCC GADVTEHADGLSIRPAPLHGGVFHTYADHRMAHAGVIIGAAVEDVLVENVATTGKTFPDF CCCHHHCCCCCEECCCCCCCCEEEHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCHH AGFWSGLIEE HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA