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The map label for this gene is lpqB [H]

Identifier: 119715671

GI number: 119715671

Start: 1520346

End: 1522094

Strand: Direct

Name: lpqB [H]

Synonym: Noca_1435

Alternate gene names: 119715671

Gene position: 1520346-1522094 (Clockwise)

Preceding gene: 119715670

Following gene: 119715672

Centisome position: 30.49

GC content: 72.67

Gene sequence:

>1749_bases
ATGAGGCGCGGCGTGCTGGCCGTCCTGGCCGGGATCCTGCTGGTGGCTCTCGCGAGTGGCTGCGTGCGCCTGCCGGGCAG
CGGGCCGGTGGTCGAGACCCGCTCGGAGGGCGATGTGTCCAGCGACAACGGCGTCTCCTTCGACCCGATGCCGCCGCAAC
CGGGTGCCACCCGGACCGAGATCGTGCGCGGCTTCCTGATCGCGATGCAGAAGACGCCGATCGGCACCAAGGTCGCCCGC
CAGTTCCTGACCACCGACGCGGCCGCGTCCTGGAACCCGCAGCAGGAGACGATCACCTACCCGCTCTCGCCGACGCCGCG
CGAGAGCCAGCGCGGAGTCACGATCACCCTCACCGACGCCGACCACCTCGACAGCCGAGGCGCCTGGCGCGGGCCGCTCC
CCAAGGACCGCCGTACGGTCACCTTCTCGATGTCGTCCGAGCACGGCGAGTGGCGCATCGCCGATCTCCCCGACGCGCTG
ATCGTCCCGGAGGACTGGTTCCAGCAGTACTACCGCCAGGTCTCCCTGTACTTCTTCGACCCGACGGCCTCGATCCTCGT
TCCCGAGCCGGCGTTCGTCCCCCGCGGTGACCAGCTGGCCTCCGCCCTCACCCAGGCGCTGCTGCTCGGGCCGTCTCCCG
GCCTGGAGCGGGTGGCGCAGAGCTTCATCCCGCCCGGCCTCGAGGTGTCCGTCGGGGTGACCGTCTCCGACGACGGCGTG
GCCGACATCCTGTTGTCCGGAGAGGTCGGCCAGCTGACCGCGGACACCACGGAGATGATGCTGGCGCAACTGGCGTGGAC
GCTCCGCCAGGAGCCGGCGGTCAGGAGCATCAAGCTGTCGGCGAACGGCAACCCGGTCCCGCTGCCGGGCGGCGTCTCGT
CGTACCGCGTCGACGGCGGAGCGCAGTTCGACCCCGCGGGGTTCCAGGCCAGCCCGCTGCTCTACGGCCTGAGTCACGGC
GGTGTCATCTCGGGCACCCCGACCGGCCTGGCTCCCGTCGAGGGCGTCCTCGCCGGCCCGGGCCTCGGTCTGACCTCGAT
CGGCGTCAGTCTCGACGCCGGGTCGGTCGCGGGCATCGGCGCCGACGGCACCGCGGTCCTCGTCGGTGAGCTCGGCGTCG
CGGGCGACACCCAGGTGCGGACCGTCGTCAGCGGCGGGCAGAGCTTCCTCGAGCCCGCGTGGGACTTCTCGGGACGGATG
TGGTTGGTCGACCGCGCCTCGCGTGGAGCGCGGGTCTCCTACGTCCAGGGCACGCGAGTTCGTCCGCTGGACGTGCCCGG
CGTCTCCGGGGAGCAGGTCCGGTCGTTCCTGGTCTCCCGCGACGGCAGCCGCCTGGTCGCCGTCGTGCACAGGAAGGGTG
GCGACCAGCTGGTCGTGAGCCGGATCGAGCACGACGGCACCGGCCGGGTGCTGGGCGCCACCCGTGCGACGCGGATCGGG
ACCGGCGTGGACGCGCCGCTGCCGATCCGCGCGATCGCCTGGCGCAGCACCACCAGCGTGGCGGTGCTCAACCCGCCCGT
GACGAGCTCGCTGGCCTCGATCGGGCTGGCCTCCGTGGACGGCTCGCCGTCGAGCCAGGAGCCCTCGTCGGTGACGGTGG
AAGGCCGGCTGATCGCGCTCGCCGGTTCGCCCGCAGGCGACGAGCCCGTCTACGGGCTGACCCGCGCCGGCCTGGTCGAC
ATCAGCAGCTCCGACCAGCGGGTGACGCCACTGCCGAAGGGGACCACGGACCTCGGCTACGTCGGCTGA

Upstream 100 bases:

>100_bases
AGGGGGCACAGTTCCGGCTGACGCTGCCCCGGCGCGCCGGGGGCGTCCTGCGGCACAGCCCACTGCCGCTCGTGCCCGCT
GATGTCACGGAGCCGGTCTC

Downstream 100 bases:

>100_bases
TCCACAGGCGCGGCCGGCCCGCTTGAGTCGCGGCACCGGGCCTGCTGCCATCGAGCATGCTCCGCGACCTCATCGACGCG
TCCCTCGACCTGCTGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MRRGVLAVLAGILLVALASGCVRLPGSGPVVETRSEGDVSSDNGVSFDPMPPQPGATRTEIVRGFLIAMQKTPIGTKVAR
QFLTTDAAASWNPQQETITYPLSPTPRESQRGVTITLTDADHLDSRGAWRGPLPKDRRTVTFSMSSEHGEWRIADLPDAL
IVPEDWFQQYYRQVSLYFFDPTASILVPEPAFVPRGDQLASALTQALLLGPSPGLERVAQSFIPPGLEVSVGVTVSDDGV
ADILLSGEVGQLTADTTEMMLAQLAWTLRQEPAVRSIKLSANGNPVPLPGGVSSYRVDGGAQFDPAGFQASPLLYGLSHG
GVISGTPTGLAPVEGVLAGPGLGLTSIGVSLDAGSVAGIGADGTAVLVGELGVAGDTQVRTVVSGGQSFLEPAWDFSGRM
WLVDRASRGARVSYVQGTRVRPLDVPGVSGEQVRSFLVSRDGSRLVAVVHRKGGDQLVVSRIEHDGTGRVLGATRATRIG
TGVDAPLPIRAIAWRSTTSVAVLNPPVTSSLASIGLASVDGSPSSQEPSSVTVEGRLIALAGSPAGDEPVYGLTRAGLVD
ISSSDQRVTPLPKGTTDLGYVG

Sequences:

>Translated_582_residues
MRRGVLAVLAGILLVALASGCVRLPGSGPVVETRSEGDVSSDNGVSFDPMPPQPGATRTEIVRGFLIAMQKTPIGTKVAR
QFLTTDAAASWNPQQETITYPLSPTPRESQRGVTITLTDADHLDSRGAWRGPLPKDRRTVTFSMSSEHGEWRIADLPDAL
IVPEDWFQQYYRQVSLYFFDPTASILVPEPAFVPRGDQLASALTQALLLGPSPGLERVAQSFIPPGLEVSVGVTVSDDGV
ADILLSGEVGQLTADTTEMMLAQLAWTLRQEPAVRSIKLSANGNPVPLPGGVSSYRVDGGAQFDPAGFQASPLLYGLSHG
GVISGTPTGLAPVEGVLAGPGLGLTSIGVSLDAGSVAGIGADGTAVLVGELGVAGDTQVRTVVSGGQSFLEPAWDFSGRM
WLVDRASRGARVSYVQGTRVRPLDVPGVSGEQVRSFLVSRDGSRLVAVVHRKGGDQLVVSRIEHDGTGRVLGATRATRIG
TGVDAPLPIRAIAWRSTTSVAVLNPPVTSSLASIGLASVDGSPSSQEPSSVTVEGRLIALAGSPAGDEPVYGLTRAGLVD
ISSSDQRVTPLPKGTTDLGYVG
>Mature_582_residues
MRRGVLAVLAGILLVALASGCVRLPGSGPVVETRSEGDVSSDNGVSFDPMPPQPGATRTEIVRGFLIAMQKTPIGTKVAR
QFLTTDAAASWNPQQETITYPLSPTPRESQRGVTITLTDADHLDSRGAWRGPLPKDRRTVTFSMSSEHGEWRIADLPDAL
IVPEDWFQQYYRQVSLYFFDPTASILVPEPAFVPRGDQLASALTQALLLGPSPGLERVAQSFIPPGLEVSVGVTVSDDGV
ADILLSGEVGQLTADTTEMMLAQLAWTLRQEPAVRSIKLSANGNPVPLPGGVSSYRVDGGAQFDPAGFQASPLLYGLSHG
GVISGTPTGLAPVEGVLAGPGLGLTSIGVSLDAGSVAGIGADGTAVLVGELGVAGDTQVRTVVSGGQSFLEPAWDFSGRM
WLVDRASRGARVSYVQGTRVRPLDVPGVSGEQVRSFLVSRDGSRLVAVVHRKGGDQLVVSRIEHDGTGRVLGATRATRIG
TGVDAPLPIRAIAWRSTTSVAVLNPPVTSSLASIGLASVDGSPSSQEPSSVTVEGRLIALAGSPAGDEPVYGLTRAGLVD
ISSSDQRVTPLPKGTTDLGYVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpqB lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019606
- InterPro:   IPR018910
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10646 Germane; PF10647 Gmad1 [H]

EC number: NA

Molecular weight: Translated: 60540; Mature: 60540

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGVLAVLAGILLVALASGCVRLPGSGPVVETRSEGDVSSDNGVSFDPMPPQPGATRTE
CCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCHHHH
IVRGFLIAMQKTPIGTKVARQFLTTDAAASWNPQQETITYPLSPTPRESQRGVTITLTDA
HHHHHHEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECC
DHLDSRGAWRGPLPKDRRTVTFSMSSEHGEWRIADLPDALIVPEDWFQQYYRQVSLYFFD
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEECCHHHHHHHHHEEEEEEEC
PTASILVPEPAFVPRGDQLASALTQALLLGPSPGLERVAQSFIPPGLEVSVGVTVSDDGV
CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCC
ADILLSGEVGQLTADTTEMMLAQLAWTLRQEPAVRSIKLSANGNPVPLPGGVSSYRVDGG
EEEEECCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCEEECCC
AQFDPAGFQASPLLYGLSHGGVISGTPTGLAPVEGVLAGPGLGLTSIGVSLDAGSVAGIG
CCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEECCCCCHHHCCEEECCCCEEEEC
ADGTAVLVGELGVAGDTQVRTVVSGGQSFLEPAWDFSGRMWLVDRASRGARVSYVQGTRV
CCCCEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCC
RPLDVPGVSGEQVRSFLVSRDGSRLVAVVHRKGGDQLVVSRIEHDGTGRVLGATRATRIG
CCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEECCCHHCCC
TGVDAPLPIRAIAWRSTTSVAVLNPPVTSSLASIGLASVDGSPSSQEPSSVTVEGRLIAL
CCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHCEEEECCCCCCCCCCCEEEEEEEEEEE
AGSPAGDEPVYGLTRAGLVDISSSDQRVTPLPKGTTDLGYVG
ECCCCCCCCCCEECCCCEEEECCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRRGVLAVLAGILLVALASGCVRLPGSGPVVETRSEGDVSSDNGVSFDPMPPQPGATRTE
CCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCHHHH
IVRGFLIAMQKTPIGTKVARQFLTTDAAASWNPQQETITYPLSPTPRESQRGVTITLTDA
HHHHHHEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECC
DHLDSRGAWRGPLPKDRRTVTFSMSSEHGEWRIADLPDALIVPEDWFQQYYRQVSLYFFD
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEECCHHHHHHHHHEEEEEEEC
PTASILVPEPAFVPRGDQLASALTQALLLGPSPGLERVAQSFIPPGLEVSVGVTVSDDGV
CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCC
ADILLSGEVGQLTADTTEMMLAQLAWTLRQEPAVRSIKLSANGNPVPLPGGVSSYRVDGG
EEEEECCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCEEECCC
AQFDPAGFQASPLLYGLSHGGVISGTPTGLAPVEGVLAGPGLGLTSIGVSLDAGSVAGIG
CCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEECCCCCHHHCCEEECCCCEEEEC
ADGTAVLVGELGVAGDTQVRTVVSGGQSFLEPAWDFSGRMWLVDRASRGARVSYVQGTRV
CCCCEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCC
RPLDVPGVSGEQVRSFLVSRDGSRLVAVVHRKGGDQLVVSRIEHDGTGRVLGATRATRIG
CCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEECCCHHCCC
TGVDAPLPIRAIAWRSTTSVAVLNPPVTSSLASIGLASVDGSPSSQEPSSVTVEGRLIAL
CCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHCEEEECCCCCCCCCCCEEEEEEEEEEE
AGSPAGDEPVYGLTRAGLVDISSSDQRVTPLPKGTTDLGYVG
ECCCCCCCCCCEECCCCEEEECCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA