| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715672
Identifier: 119715672
GI number: 119715672
Start: 1522253
End: 1522900
Strand: Direct
Name: 119715672
Synonym: Noca_1436
Alternate gene names: NA
Gene position: 1522253-1522900 (Clockwise)
Preceding gene: 119715671
Following gene: 119715673
Centisome position: 30.53
GC content: 77.62
Gene sequence:
>648_bases ATGCTGCCCGGGGCAGGGCGGCCGGCGTGGCCGACACCGGCTCCAGCCGGGCTGGCGGCGCCCTGGGCGGTCACGGAGTA CGCCGGTACGGCCCGCGCCATGGTGCTCGCCCACAAGGAGCACCGGGTGCTGGCGCTACGGCGACCGCTCGGGCGGCTGC TGAGCGTGGCCGTCGAGTCCGGGCTGGCCGGCGCCGACTCCCCGGTCGGGCCGGACGATCCCGTCGTCCTGGTCCCGGTG CCCTCCCGGCCCGGGTCGGCGCGCGTCCGGGGCCACGACCCGACCTGGTCGATCACGGCCCGGGCCGCCCGGCTCGCCCG GGCGACGGGACGCGACGTCGTGGCGATGCGATTGCTGCGCAGTCGGCCCGGCGTGCTCGACCAGGCCGGCCTGGACGCTG GTGCGCGGGCCGCCAACCTGGCCGGCTCGATGCACTGTCCCAGCGGCTCCCTCGGCCGGCTGCGGGCGCGCCGGCCGCGG ACGCACGTCGTCATCTGCGACGACGTGATCACCACCGGCTCGACCGCCCGCGAGGCACAGCGCGCGCTCGAGGCGGTGGG TCTCTCGGTCGTCGGAATCGCTGCCGTCGCGGCCACCCGGAGGCGCGGTGCGCCGGCTCCCGGTTCCTGGGACCTCGGTC CCTTTTGA
Upstream 100 bases:
>100_bases GCTCCGCGACCTCATCGACGCGTCCCTCGACCTGCTGCTCGGCGGCTCGTGCGTGGGCTGTGCCCGGCCGGGTCGCGCGC TGTGCGACCGGTGTGCGGCG
Downstream 100 bases:
>100_bases TTGCCGAGGGGTTCGACTAACGTCTGTGCATGGAGTCCGTCCGGGTCCGTGGTTGCGTCGTCGGGACGCCCGGGTCCACC CGGGCGGTCAGTCGACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLPGAGRPAWPTPAPAGLAAPWAVTEYAGTARAMVLAHKEHRVLALRRPLGRLLSVAVESGLAGADSPVGPDDPVVLVPV PSRPGSARVRGHDPTWSITARAARLARATGRDVVAMRLLRSRPGVLDQAGLDAGARAANLAGSMHCPSGSLGRLRARRPR THVVICDDVITTGSTAREAQRALEAVGLSVVGIAAVAATRRRGAPAPGSWDLGPF
Sequences:
>Translated_215_residues MLPGAGRPAWPTPAPAGLAAPWAVTEYAGTARAMVLAHKEHRVLALRRPLGRLLSVAVESGLAGADSPVGPDDPVVLVPV PSRPGSARVRGHDPTWSITARAARLARATGRDVVAMRLLRSRPGVLDQAGLDAGARAANLAGSMHCPSGSLGRLRARRPR THVVICDDVITTGSTAREAQRALEAVGLSVVGIAAVAATRRRGAPAPGSWDLGPF >Mature_215_residues MLPGAGRPAWPTPAPAGLAAPWAVTEYAGTARAMVLAHKEHRVLALRRPLGRLLSVAVESGLAGADSPVGPDDPVVLVPV PSRPGSARVRGHDPTWSITARAARLARATGRDVVAMRLLRSRPGVLDQAGLDAGARAANLAGSMHCPSGSLGRLRARRPR THVVICDDVITTGSTAREAQRALEAVGLSVVGIAAVAATRRRGAPAPGSWDLGPF
Specific function: Unknown
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22184; Mature: 22184
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPGAGRPAWPTPAPAGLAAPWAVTEYAGTARAMVLAHKEHRVLALRRPLGRLLSVAVES CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH GLAGADSPVGPDDPVVLVPVPSRPGSARVRGHDPTWSITARAARLARATGRDVVAMRLLR CCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH SRPGVLDQAGLDAGARAANLAGSMHCPSGSLGRLRARRPRTHVVICDDVITTGSTAREAQ HCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHH RALEAVGLSVVGIAAVAATRRRGAPAPGSWDLGPF HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLPGAGRPAWPTPAPAGLAAPWAVTEYAGTARAMVLAHKEHRVLALRRPLGRLLSVAVES CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH GLAGADSPVGPDDPVVLVPVPSRPGSARVRGHDPTWSITARAARLARATGRDVVAMRLLR CCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH SRPGVLDQAGLDAGARAANLAGSMHCPSGSLGRLRARRPRTHVVICDDVITTGSTAREAQ HCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHH RALEAVGLSVVGIAAVAATRRRGAPAPGSWDLGPF HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA