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The map label for this gene is yfmO [H]

Identifier: 119715532

GI number: 119715532

Start: 1370039

End: 1371259

Strand: Reverse

Name: yfmO [H]

Synonym: Noca_1296

Alternate gene names: 119715532

Gene position: 1371259-1370039 (Counterclockwise)

Preceding gene: 119715533

Following gene: 119715530

Centisome position: 27.5

GC content: 72.07

Gene sequence:

>1221_bases
GTGAGCTCGTTCCTCAAGCAGCCCCGCGCCGTCTGGGCCGTCGCCTTCGCCTGCGTCATCGGCTTCATGGGCATCGGGCT
GGTCGACCCGATCCTCAAGGAGATCGCGGCCGACCTCGGCGCGACCGGCAGCCAGGTGTCGCTGCTGTTCAGCAGCTACA
TGGCGGTGATGGGCGTCGCGATGCTCGTGACGGGCGTGGTCTCGAGCCGGATCGGCGCGAAGCGGACCCTGCTCTCGGGG
CTGGTGCTCATCGTCGTGTTCGCCGCACTGGCCGGCTCGTCGGGCTCCGTCGGCGCCGTGATCGGCTTCCGGGCCGGGTG
GGGTCTCGGCAACGCGCTCTTCGTCGCGACCGCGCTGGCGACGATCGTGCAGTCGTCGAAGGGCTCGGTCGCGCAGGCCG
TCATCCTGTTCGAGGCCGCCCTCGGCCTGGGCATCGCCTCCGGCCCGCTGGTCGGCGGCCTGCTCGGCGAGCAGTCCTGG
CGCGCGCCCTTCTACGGCGTGTCCACGCTGATGACGATCGCGGCGGTCGCGACCGCGCTGATGCTCCCGGCCACGCCGCC
TCAGGGTCGGCGTACGTCGCTCGCCGACCCGTTCCGGGCCCTGCGCCACCCGGCACTGCTGCTGCTCGCGCTGGTCGCGG
TCTGCTACAACCTGGGGTTCTTCACGCTGATGGCCGCCGGACCGTTCGCACTGCCGAGCTACGGGATCATGGAGATCGGC
TGGACGTTCTTCGGCTGGGGTGTGCTGCTGGCGTTCACCTCCGTGGTCCTCGCGCCGTGGCTGCAGCGGCGCTTCGGCAC
GCTGCCCACGCTGACCGCGGTGCTGGCCCTGTTCGCGGCGGTGCTCGCGGTGCTGGCGGTGAACTCCGGGAACGAGACCA
CGATCACCGTCGGCATCGTGGTGATCGGCGGGCTCCTCGGCATCAACAACACGCTGGTGACCGAAGCGGTCATGGGCGCG
GCCCCGGTCGAGCGGGCGGTCGCCTCGGCGGCGTACTCCTTCGTCCGGTTCACCGGCGGTGCGATCGGTCCGTACGTCGC
GATGAAGCTCTTCGAGCGCCACGGAGCGGCCGCGCCGTTCTGGTTCGGCGCCGCGGCCGTCACCGTCGGGGTCGTGGTCA
TCGCCGCCGGCAGCACCACGATCCGGCGGGCCCTGGTCGGCACGCCCGCGTCCCACTCCGCCGCCGAGGCCGAGGCGGAG
CTGCTCGGCGACCTGGCCTGA

Upstream 100 bases:

>100_bases
GCATCGCCGCGCTCGTCGCCGACCACCCCGCTCTGACCACCGAGGACCTGGCCACGGCGGTCGCCGTGCTGCGCGGTGTC
CTCGAGAAGGGAAACCCCTC

Downstream 100 bases:

>100_bases
CGATCAACGCCCCGGCTGCCGTGGCGGCCGGGGCGTTGCTCCCTCCCAGAAGGGAGACCGTGGGCGTCTCCCTCCCGGGG
GAACGCTCGTCGCCCAGCCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSSFLKQPRAVWAVAFACVIGFMGIGLVDPILKEIAADLGATGSQVSLLFSSYMAVMGVAMLVTGVVSSRIGAKRTLLSG
LVLIVVFAALAGSSGSVGAVIGFRAGWGLGNALFVATALATIVQSSKGSVAQAVILFEAALGLGIASGPLVGGLLGEQSW
RAPFYGVSTLMTIAAVATALMLPATPPQGRRTSLADPFRALRHPALLLLALVAVCYNLGFFTLMAAGPFALPSYGIMEIG
WTFFGWGVLLAFTSVVLAPWLQRRFGTLPTLTAVLALFAAVLAVLAVNSGNETTITVGIVVIGGLLGINNTLVTEAVMGA
APVERAVASAAYSFVRFTGGAIGPYVAMKLFERHGAAAPFWFGAAAVTVGVVVIAAGSTTIRRALVGTPASHSAAEAEAE
LLGDLA

Sequences:

>Translated_406_residues
MSSFLKQPRAVWAVAFACVIGFMGIGLVDPILKEIAADLGATGSQVSLLFSSYMAVMGVAMLVTGVVSSRIGAKRTLLSG
LVLIVVFAALAGSSGSVGAVIGFRAGWGLGNALFVATALATIVQSSKGSVAQAVILFEAALGLGIASGPLVGGLLGEQSW
RAPFYGVSTLMTIAAVATALMLPATPPQGRRTSLADPFRALRHPALLLLALVAVCYNLGFFTLMAAGPFALPSYGIMEIG
WTFFGWGVLLAFTSVVLAPWLQRRFGTLPTLTAVLALFAAVLAVLAVNSGNETTITVGIVVIGGLLGINNTLVTEAVMGA
APVERAVASAAYSFVRFTGGAIGPYVAMKLFERHGAAAPFWFGAAAVTVGVVVIAAGSTTIRRALVGTPASHSAAEAEAE
LLGDLA
>Mature_405_residues
SSFLKQPRAVWAVAFACVIGFMGIGLVDPILKEIAADLGATGSQVSLLFSSYMAVMGVAMLVTGVVSSRIGAKRTLLSGL
VLIVVFAALAGSSGSVGAVIGFRAGWGLGNALFVATALATIVQSSKGSVAQAVILFEAALGLGIASGPLVGGLLGEQSWR
APFYGVSTLMTIAAVATALMLPATPPQGRRTSLADPFRALRHPALLLLALVAVCYNLGFFTLMAAGPFALPSYGIMEIGW
TFFGWGVLLAFTSVVLAPWLQRRFGTLPTLTAVLALFAAVLAVLAVNSGNETTITVGIVVIGGLLGINNTLVTEAVMGAA
PVERAVASAAYSFVRFTGGAIGPYVAMKLFERHGAAAPFWFGAAAVTVGVVVIAAGSTTIRRALVGTPASHSAAEAEAEL
LGDLA

Specific function: Acts to efflux copper or a copper complex. It is possible that yfmO could contribute to copper resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41344; Mature: 41213

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFLKQPRAVWAVAFACVIGFMGIGLVDPILKEIAADLGATGSQVSLLFSSYMAVMGVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MLVTGVVSSRIGAKRTLLSGLVLIVVFAALAGSSGSVGAVIGFRAGWGLGNALFVATALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
TIVQSSKGSVAQAVILFEAALGLGIASGPLVGGLLGEQSWRAPFYGVSTLMTIAAVATAL
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
MLPATPPQGRRTSLADPFRALRHPALLLLALVAVCYNLGFFTLMAAGPFALPSYGIMEIG
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
WTFFGWGVLLAFTSVVLAPWLQRRFGTLPTLTAVLALFAAVLAVLAVNSGNETTITVGIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHH
VIGGLLGINNTLVTEAVMGAAPVERAVASAAYSFVRFTGGAIGPYVAMKLFERHGAAAPF
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCH
WFGAAAVTVGVVVIAAGSTTIRRALVGTPASHSAAEAEAELLGDLA
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSFLKQPRAVWAVAFACVIGFMGIGLVDPILKEIAADLGATGSQVSLLFSSYMAVMGVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MLVTGVVSSRIGAKRTLLSGLVLIVVFAALAGSSGSVGAVIGFRAGWGLGNALFVATALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
TIVQSSKGSVAQAVILFEAALGLGIASGPLVGGLLGEQSWRAPFYGVSTLMTIAAVATAL
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
MLPATPPQGRRTSLADPFRALRHPALLLLALVAVCYNLGFFTLMAAGPFALPSYGIMEIG
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
WTFFGWGVLLAFTSVVLAPWLQRRFGTLPTLTAVLALFAAVLAVLAVNSGNETTITVGIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHH
VIGGLLGINNTLVTEAVMGAAPVERAVASAAYSFVRFTGGAIGPYVAMKLFERHGAAAPF
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCH
WFGAAAVTVGVVVIAAGSTTIRRALVGTPASHSAAEAEAELLGDLA
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]