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The map label for this gene is asnC [C]

Identifier: 119715530

GI number: 119715530

Start: 1368127

End: 1368594

Strand: Reverse

Name: asnC [C]

Synonym: Noca_1294

Alternate gene names: 119715530

Gene position: 1368594-1368127 (Counterclockwise)

Preceding gene: 119715532

Following gene: 119715529

Centisome position: 27.45

GC content: 72.65

Gene sequence:

>468_bases
ATGGACGACCTCGACGGCAGGTTGATCGAGCTGTTCGCCGAGCGTCCGCGTCTCGGCGTCCTCGAGGCCTCGCGGCGCCT
CGGGGTGGCCCGTGGCACCGTCCAGGCGCGTCTGGACAAGCTCACCGCCACCGGCGTGATCACCGGCTGGGGCCCCGATC
TCTCGCCCGCCGCGCTGGGCTACCCGGTGACGGCCTTCCTGACCCTGGAGATCCGGCAGGGCGCCCGCCAGGGCGGCCAC
GACACGGTCGGTGCCCACCTCGCCTCGATCCCCGAGGTGCTCGAGGTGCACACGATCACCGGTGCCGGCGACCTGTGGGC
CCGCGTCGTCGCCCGGTCGAACTCCGACCTGCAGCGGGTGATCGACCGGGTGCTCGAGGCGCCGACGATCGTGCGGTCCT
CGACCGTGATCGCCCTGGCCACGCAGGTCCCCTACCGGATGCTTCCCCTCGCGCGAACCCTCAGCTGA

Upstream 100 bases:

>100_bases
GTCCGGTGTCAGTGTCATGCCCGCAGCGTGGTCAGGGTCACACAGGATGTGCAACACTAACCCGACACACTGGGCAATTT
GTACAGTCGGAGGCATCAGG

Downstream 100 bases:

>100_bases
GCGGGCTTCTCGCCGATCTCTGGGCAACGGCAGCGGGCGATCCCTTGCTGCCTCCCCCACGTGCGGATGAGGAGAGTCGT
GTTGAAGTTCCTGCGCAAGG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDDLDGRLIELFAERPRLGVLEASRRLGVARGTVQARLDKLTATGVITGWGPDLSPAALGYPVTAFLTLEIRQGARQGGH
DTVGAHLASIPEVLEVHTITGAGDLWARVVARSNSDLQRVIDRVLEAPTIVRSSTVIALATQVPYRMLPLARTLS

Sequences:

>Translated_155_residues
MDDLDGRLIELFAERPRLGVLEASRRLGVARGTVQARLDKLTATGVITGWGPDLSPAALGYPVTAFLTLEIRQGARQGGH
DTVGAHLASIPEVLEVHTITGAGDLWARVVARSNSDLQRVIDRVLEAPTIVRSSTVIALATQVPYRMLPLARTLS
>Mature_155_residues
MDDLDGRLIELFAERPRLGVLEASRRLGVARGTVQARLDKLTATGVITGWGPDLSPAALGYPVTAFLTLEIRQGARQGGH
DTVGAHLASIPEVLEVHTITGAGDLWARVVARSNSDLQRVIDRVLEAPTIVRSSTVIALATQVPYRMLPLARTLS

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=156, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 16641; Mature: 16641

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLDGRLIELFAERPRLGVLEASRRLGVARGTVQARLDKLTATGVITGWGPDLSPAALG
CCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCC
YPVTAFLTLEIRQGARQGGHDTVGAHLASIPEVLEVHTITGAGDLWARVVARSNSDLQRV
CCEEHEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHH
IDRVLEAPTIVRSSTVIALATQVPYRMLPLARTLS
HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MDDLDGRLIELFAERPRLGVLEASRRLGVARGTVQARLDKLTATGVITGWGPDLSPAALG
CCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCC
YPVTAFLTLEIRQGARQGGHDTVGAHLASIPEVLEVHTITGAGDLWARVVARSNSDLQRV
CCEEHEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHH
IDRVLEAPTIVRSSTVIALATQVPYRMLPLARTLS
HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA