| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is marR [C]
Identifier: 119715533
GI number: 119715533
Start: 1371256
End: 1371729
Strand: Reverse
Name: marR [C]
Synonym: Noca_1297
Alternate gene names: 119715533
Gene position: 1371729-1371256 (Counterclockwise)
Preceding gene: 119715536
Following gene: 119715532
Centisome position: 27.51
GC content: 74.68
Gene sequence:
>474_bases GTGCCACCCGCCGATCAGACCGACGCCGACGCCGACGGCTCCGCGCACGGGAGCGACCTGACCCGCGACCTCGCCAGCGA CCTGGTCGTGCATGCCGCCCGCCTCGTCCGCGCCGTACGCCGGGAGCTCGAGCTCCCCGCCGGCACCCGGGTGATCTCGT TGCTCGACGAGCACGGACCGCTCGGCGTCACCCACCTGGCCGCGGCCGACCGCTGCTCGCAGCCGACCATGTCGGCCCTG GTCACCCAGCTCGTCGAGCGCGGGTGGGTCACCAAGGCGCCGAACCCCGAGGACGCGCGTGGCACCGTCGTGGCGCTCAC CGACGCAGGTCGCGCCGAGCTCGCCGTCGTACGCCGTCGCCACGGCGAACGCATCGCCGCGCTCGTCGCCGACCACCCCG CTCTGACCACCGAGGACCTGGCCACGGCGGTCGCCGTGCTGCGCGGTGTCCTCGAGAAGGGAAACCCCTCGTGA
Upstream 100 bases:
>100_bases TCGCGCGCAGGAAGCCGATGTAGGTGGCCACCCACCGCATGATGCCGGGTGGTCCACGTCACGTGGAAGTACATAGGATT CCTATGTACTGTCGCTGGAC
Downstream 100 bases:
>100_bases GCTCGTTCCTCAAGCAGCCCCGCGCCGTCTGGGCCGTCGCCTTCGCCTGCGTCATCGGCTTCATGGGCATCGGGCTGGTC GACCCGATCCTCAAGGAGAT
Product: regulatory protein MarR
Products: NA
Alternate protein names: Regulatory Protein MarR
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPPADQTDADADGSAHGSDLTRDLASDLVVHAARLVRAVRRELELPAGTRVISLLDEHGPLGVTHLAAADRCSQPTMSAL VTQLVERGWVTKAPNPEDARGTVVALTDAGRAELAVVRRRHGERIAALVADHPALTTEDLATAVAVLRGVLEKGNPS
Sequences:
>Translated_157_residues MPPADQTDADADGSAHGSDLTRDLASDLVVHAARLVRAVRRELELPAGTRVISLLDEHGPLGVTHLAAADRCSQPTMSAL VTQLVERGWVTKAPNPEDARGTVVALTDAGRAELAVVRRRHGERIAALVADHPALTTEDLATAVAVLRGVLEKGNPS >Mature_156_residues PPADQTDADADGSAHGSDLTRDLASDLVVHAARLVRAVRRELELPAGTRVISLLDEHGPLGVTHLAAADRCSQPTMSALV TQLVERGWVTKAPNPEDARGTVVALTDAGRAELAVVRRRHGERIAALVADHPALTTEDLATAVAVLRGVLEKGNPS
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16497; Mature: 16366
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPADQTDADADGSAHGSDLTRDLASDLVVHAARLVRAVRRELELPAGTRVISLLDEHGP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC LGVTHLAAADRCSQPTMSALVTQLVERGWVTKAPNPEDARGTVVALTDAGRAELAVVRRR CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH HGERIAALVADHPALTTEDLATAVAVLRGVLEKGNPS HCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PPADQTDADADGSAHGSDLTRDLASDLVVHAARLVRAVRRELELPAGTRVISLLDEHGP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC LGVTHLAAADRCSQPTMSALVTQLVERGWVTKAPNPEDARGTVVALTDAGRAELAVVRRR CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH HGERIAALVADHPALTTEDLATAVAVLRGVLEKGNPS HCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA