| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715044
Identifier: 119715044
GI number: 119715044
Start: 840180
End: 840872
Strand: Direct
Name: 119715044
Synonym: Noca_0797
Alternate gene names: NA
Gene position: 840180-840872 (Clockwise)
Preceding gene: 119715042
Following gene: 119715045
Centisome position: 16.85
GC content: 64.94
Gene sequence:
>693_bases GTGGAACTCAACGATGTGATGCGATCCCAGGCCGCGACCCGGTACTACGACGACCGGGACGTGCCTGACAAGGTCCTGTA CGACGCGGTCGAGAAGGCGCGCTTCGGCCCCCAAGGGGGGAATCGCCAGCCCGTGCGGTTCGTCTTCGTGCGCGACCAGG CGAAGAAGCGCCAGCTTGCGGAGTGGTACATCCAGCCGTGGAAGGCCTACTACGACGCGGCGATGGCGGGCATCAACTCC ATCGAGGCACACGACGAGGGCCACACCCAGAAGGCCACCTGGATCGGCCATTCGAAGGCCGAGCAGGCGCTCGCCGACGC GAACCACTTCGCCGAGCACTTCGCCGACCACCCTGTGATCGCCGTCGTCTGCGGTGATCTCGGTGCCACCCACCCCACAG ACACCGAGCTGGACCGGCTCAGCGTGGTGGGAGGAGCCTCGATCTACCCGACGGCGCAGAACTTCTGCCTGGCTCTACGG GACGCCGGCATCGCCACCACGTTCACCACGCTGCTGGTTGCCTACGAGCCCCAGGTCAAGGAGCTCTTGAACATTCCGGA GGAGTTCATCACCGCTTGCCACATCGTCGCGGGGTATCCGGCGAAGCCGTTCCCAACCAAGCTCAACCGGCTTGCTCCGG AGGAGATGGCCTACATCGACACGTTTGGCAACCCCATCTCTGCCGGATCGTGA
Upstream 100 bases:
>100_bases GCTTGCACAGGAGCGAGCCTGACGGGCGTGCTTGACGTGATGCAGCACACATGTAGGATCCCCCTAACGAACGAACGTTA GGGATGAAGGAGGACGCCCG
Downstream 100 bases:
>100_bases CGAACCCGAACGAATCCGCCAGTCTGGAGAAGACGACTCATGACGAGTAGTGAAGCGTCGGGGTCCTCCGAGGTCACGAC GGTCTCGGGGATTCCGCTCA
Product: nitroreductase
Products: NA
Alternate protein names: NADH Dehydrogenase; Nitroreductase Family Protein; Ribonuclease BN
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MELNDVMRSQAATRYYDDRDVPDKVLYDAVEKARFGPQGGNRQPVRFVFVRDQAKKRQLAEWYIQPWKAYYDAAMAGINS IEAHDEGHTQKATWIGHSKAEQALADANHFAEHFADHPVIAVVCGDLGATHPTDTELDRLSVVGGASIYPTAQNFCLALR DAGIATTFTTLLVAYEPQVKELLNIPEEFITACHIVAGYPAKPFPTKLNRLAPEEMAYIDTFGNPISAGS
Sequences:
>Translated_230_residues MELNDVMRSQAATRYYDDRDVPDKVLYDAVEKARFGPQGGNRQPVRFVFVRDQAKKRQLAEWYIQPWKAYYDAAMAGINS IEAHDEGHTQKATWIGHSKAEQALADANHFAEHFADHPVIAVVCGDLGATHPTDTELDRLSVVGGASIYPTAQNFCLALR DAGIATTFTTLLVAYEPQVKELLNIPEEFITACHIVAGYPAKPFPTKLNRLAPEEMAYIDTFGNPISAGS >Mature_230_residues MELNDVMRSQAATRYYDDRDVPDKVLYDAVEKARFGPQGGNRQPVRFVFVRDQAKKRQLAEWYIQPWKAYYDAAMAGINS IEAHDEGHTQKATWIGHSKAEQALADANHFAEHFADHPVIAVVCGDLGATHPTDTELDRLSVVGGASIYPTAQNFCLALR DAGIATTFTTLLVAYEPQVKELLNIPEEFITACHIVAGYPAKPFPTKLNRLAPEEMAYIDTFGNPISAGS
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25455; Mature: 25455
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNDVMRSQAATRYYDDRDVPDKVLYDAVEKARFGPQGGNRQPVRFVFVRDQAKKRQLA CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHH EWYIQPWKAYYDAAMAGINSIEAHDEGHTQKATWIGHSKAEQALADANHFAEHFADHPVI HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEE AVVCGDLGATHPTDTELDRLSVVGGASIYPTAQNFCLALRDAGIATTFTTLLVAYEPQVK EEEECCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHH ELLNIPEEFITACHIVAGYPAKPFPTKLNRLAPEEMAYIDTFGNPISAGS HHHCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MELNDVMRSQAATRYYDDRDVPDKVLYDAVEKARFGPQGGNRQPVRFVFVRDQAKKRQLA CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHH EWYIQPWKAYYDAAMAGINSIEAHDEGHTQKATWIGHSKAEQALADANHFAEHFADHPVI HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEE AVVCGDLGATHPTDTELDRLSVVGGASIYPTAQNFCLALRDAGIATTFTTLLVAYEPQVK EEEECCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHH ELLNIPEEFITACHIVAGYPAKPFPTKLNRLAPEEMAYIDTFGNPISAGS HHHCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA