| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715042
Identifier: 119715042
GI number: 119715042
Start: 837981
End: 838799
Strand: Direct
Name: 119715042
Synonym: Noca_0795
Alternate gene names: NA
Gene position: 837981-838799 (Clockwise)
Preceding gene: 119715041
Following gene: 119715044
Centisome position: 16.81
GC content: 76.31
Gene sequence:
>819_bases GTGGACCTGAGCGCACTGATCTTCGTCGCCCTCGCCGTGGCGTGGGCCGTCTATCTCGTCCCGAAGGCGCTCCGTCACCA CGACGACGTGGCCCGCAGCCGCTCCGTGGACCGGTTCTCCCACACGATGCGCGTGCTGGCCCGCCGCGAGCCGGTGGACC GGCGCAGCGCCCGGCTCGTCGTGACGCCCGGTCGCCCGGCCGCTGAGGCGACCGCCGCCGTGCCCGCCGAGCCCGCTCCT GCGGTCACCCCTGCCCAGCTGCGCGCCCGCCGGGCTGCTGCCAAGCGGGCCACCAAGCGCCGCCGCACCGTGCTCGCCGT GATCCTGGTCGCCAACCTCGCGGTCGTGGGCGTCGCGGCCTTCCGCGTCATCGACTGGTGGTACGTCGCGATCCCCGCCG GCCTGCTGGTCGCCTGGCTGGTCACCTGCCGGATCATGGTCAAGGGCGAGCGCCGCGCGCTGCAGCCGGCTGCCCGGATG CCGATCCAGGACCCGCTCGAGGACGAGGTCGGCGAGCCGGTCGAGGACGGCGCCGACGAGGCCGACCCGCTGGCGGACAC CTCCGCCGGGATGGCCGCCGTGGTCGACCCGGCGCTGTGGGACCCGGTGCCGGTCACGCTCCCGACGTACGTCGGCAAGC CGCCCGCGGCCCGCCGCACCGTCCGCACCATCGCCCTCGACGACACCGGCGTGTGGACCTCGGGCCGCACCGACGCCGAC GCCCAGCTGGCCCGCGAGGCCGACGAGGCCGACCGCGCCGCCCGCCAGACCCGCCAGAACCGCAACGGCGGCGACGACCA GCGCGCCGTCAACTCCTGA
Upstream 100 bases:
>100_bases ATGCTGGCCCGGCTCCGACCACACCAGTCACACGAGTGATTTTGCGACACACCTGTGGACATCCGCTGCCCGCTGCGCTA ACGCTCCTAACCTCTGACCT
Downstream 100 bases:
>100_bases CGTCGAGTCGGGACTTCTCCCCATTGAGTCGGGACTTCTGACGGTCGAGTCGGGGGTTCACGGTCGAGTCGGGAATCCCC CGGGTCGATTCGGTCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MDLSALIFVALAVAWAVYLVPKALRHHDDVARSRSVDRFSHTMRVLARREPVDRRSARLVVTPGRPAAEATAAVPAEPAP AVTPAQLRARRAAAKRATKRRRTVLAVILVANLAVVGVAAFRVIDWWYVAIPAGLLVAWLVTCRIMVKGERRALQPAARM PIQDPLEDEVGEPVEDGADEADPLADTSAGMAAVVDPALWDPVPVTLPTYVGKPPAARRTVRTIALDDTGVWTSGRTDAD AQLAREADEADRAARQTRQNRNGGDDQRAVNS
Sequences:
>Translated_272_residues MDLSALIFVALAVAWAVYLVPKALRHHDDVARSRSVDRFSHTMRVLARREPVDRRSARLVVTPGRPAAEATAAVPAEPAP AVTPAQLRARRAAAKRATKRRRTVLAVILVANLAVVGVAAFRVIDWWYVAIPAGLLVAWLVTCRIMVKGERRALQPAARM PIQDPLEDEVGEPVEDGADEADPLADTSAGMAAVVDPALWDPVPVTLPTYVGKPPAARRTVRTIALDDTGVWTSGRTDAD AQLAREADEADRAARQTRQNRNGGDDQRAVNS >Mature_272_residues MDLSALIFVALAVAWAVYLVPKALRHHDDVARSRSVDRFSHTMRVLARREPVDRRSARLVVTPGRPAAEATAAVPAEPAP AVTPAQLRARRAAAKRATKRRRTVLAVILVANLAVVGVAAFRVIDWWYVAIPAGLLVAWLVTCRIMVKGERRALQPAARM PIQDPLEDEVGEPVEDGADEADPLADTSAGMAAVVDPALWDPVPVTLPTYVGKPPAARRTVRTIALDDTGVWTSGRTDAD AQLAREADEADRAARQTRQNRNGGDDQRAVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29415; Mature: 29415
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSALIFVALAVAWAVYLVPKALRHHDDVARSRSVDRFSHTMRVLARREPVDRRSARLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE VTPGRPAAEATAAVPAEPAPAVTPAQLRARRAAAKRATKRRRTVLAVILVANLAVVGVAA EECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRVIDWWYVAIPAGLLVAWLVTCRIMVKGERRALQPAARMPIQDPLEDEVGEPVEDGADE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCCCCHHHCCCCHHCCCCC ADPLADTSAGMAAVVDPALWDPVPVTLPTYVGKPPAARRTVRTIALDDTGVWTSGRTDAD CCCCCCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCCCCHH AQLAREADEADRAARQTRQNRNGGDDQRAVNS HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC >Mature Secondary Structure MDLSALIFVALAVAWAVYLVPKALRHHDDVARSRSVDRFSHTMRVLARREPVDRRSARLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE VTPGRPAAEATAAVPAEPAPAVTPAQLRARRAAAKRATKRRRTVLAVILVANLAVVGVAA EECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRVIDWWYVAIPAGLLVAWLVTCRIMVKGERRALQPAARMPIQDPLEDEVGEPVEDGADE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCCCCHHHCCCCHHCCCCC ADPLADTSAGMAAVVDPALWDPVPVTLPTYVGKPPAARRTVRTIALDDTGVWTSGRTDAD CCCCCCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCCCCHH AQLAREADEADRAARQTRQNRNGGDDQRAVNS HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA