| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714875
Identifier: 119714875
GI number: 119714875
Start: 659396
End: 659788
Strand: Direct
Name: 119714875
Synonym: Noca_0621
Alternate gene names: NA
Gene position: 659396-659788 (Clockwise)
Preceding gene: 119714874
Following gene: 119714876
Centisome position: 13.23
GC content: 66.92
Gene sequence:
>393_bases ATGGCACCCCTTACCGGCACCGCAGTCAGCGGCACGATCTCGCTGGCGGAGATTCCGTGGCCCGCTCCCGTGGCGGTGCC CAACGCTGTCGAGGGCACGCCGATGTCTCGGATCGTCTACCTGGTGGACGACACGAGCCGTCAGGCGGGCATCTGGAGTT GCTCCACGGGAGCCTTCGAGTCCAACCATTGCGGATATGTGGAGTGTGTGCACATAGTCGACGGCGCAGCGGAGTTGCGG GGCGAGGACGGCACGGTGTGGAAGGTCGGGCCCGGCACCCTGCTGGTGATCCCGGATGGCTGGGTCGGGACTTGGCACGT GACCAAACCGATCACCAAGTCGTTCGCCATCTTCCGCGCGGCCCCTGAGGCCGGCCCCGCTACCTCGTGCTGA
Upstream 100 bases:
>100_bases CGGCCTTCCGTCGTGTTGCAGTGTGGTCTCGCTGAGTCCATGAGAAACCCACATCCCCACCACTGAAGGTTGGCGTTACC GCATGAAGGAGCCCAGCACG
Downstream 100 bases:
>100_bases GCCGGGGCCACAGGGCGAGGTGGACCTCGATCCGGACCTGGACTACGACGGAGCATCAATCACGTTCGTGGCCTCCAGGG CGCTGCGGCCGTCCAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAPLTGTAVSGTISLAEIPWPAPVAVPNAVEGTPMSRIVYLVDDTSRQAGIWSCSTGAFESNHCGYVECVHIVDGAAELR GEDGTVWKVGPGTLLVIPDGWVGTWHVTKPITKSFAIFRAAPEAGPATSC
Sequences:
>Translated_130_residues MAPLTGTAVSGTISLAEIPWPAPVAVPNAVEGTPMSRIVYLVDDTSRQAGIWSCSTGAFESNHCGYVECVHIVDGAAELR GEDGTVWKVGPGTLLVIPDGWVGTWHVTKPITKSFAIFRAAPEAGPATSC >Mature_129_residues APLTGTAVSGTISLAEIPWPAPVAVPNAVEGTPMSRIVYLVDDTSRQAGIWSCSTGAFESNHCGYVECVHIVDGAAELRG EDGTVWKVGPGTLLVIPDGWVGTWHVTKPITKSFAIFRAAPEAGPATSC
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13550; Mature: 13419
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLTGTAVSGTISLAEIPWPAPVAVPNAVEGTPMSRIVYLVDDTSRQAGIWSCSTGAFE CCCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCC SNHCGYVECVHIVDGAAELRGEDGTVWKVGPGTLLVIPDGWVGTWHVTKPITKSFAIFRA CCCCCEEEEEEEECCHHHCCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEE APEAGPATSC CCCCCCCCCC >Mature Secondary Structure APLTGTAVSGTISLAEIPWPAPVAVPNAVEGTPMSRIVYLVDDTSRQAGIWSCSTGAFE CCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCC SNHCGYVECVHIVDGAAELRGEDGTVWKVGPGTLLVIPDGWVGTWHVTKPITKSFAIFRA CCCCCEEEEEEEECCHHHCCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEE APEAGPATSC CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA