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The map label for this gene is insF1 [H]

Identifier: 119714860

GI number: 119714860

Start: 637847

End: 638242

Strand: Direct

Name: insF1 [H]

Synonym: Noca_0603

Alternate gene names: 119714860

Gene position: 637847-638242 (Clockwise)

Preceding gene: 119714856

Following gene: 119714869

Centisome position: 12.79

GC content: 67.42

Gene sequence:

>396_bases
ATGAAGTCCCGGATCGCGGTCGCCGCGCTCGACAACGCGGTTGCCCGCCGTGGTGCTGAGGGCGTGGATGTGGCCGGCTG
CCTGCTGCACACCGACCGTGGGTCGCAGTTCAGGTCCAGGAAGCTGGTCCACCAACTCAACCGGCACCAGATGGTCGGCT
CCATGGGCCGAGTCGGCGCGGCCGGCGACAACGCGGCGATGGAGTCCTTCTTCTCGCTGCTGCAGAAGAACGTGCTGGAC
CGCCGCGTCTGGAACACCCGCGAGGAGCTCCGGATCGCGATCGTGACCTGGATCGAACGGACCTATCACCGCCGCCGACG
GCAAGCCGCTCTCGGGCGGTTGACCCCGGTCGAATACGAGTTGATCATGAAGCCCGCCGCCACCCAGGCGGCCTAA

Upstream 100 bases:

>100_bases
GGACATCACCGAGCACTGGACCCGCGAGGGCGAGCTGTATCTCTGCGCGATCAAGGACGTCTACTCCAACCGGATCGTCG
GCTACTCCATCGACTCACGG

Downstream 100 bases:

>100_bases
CCGAAACTGTCACCCGTCCGTGCAGCAGACCCAGCCGAGGTCCACCACGGTTTGGGCCATCGGAATGAACGTCGATGTGC
CGAGCTATCGACGACCGACG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKSRIAVAALDNAVARRGAEGVDVAGCLLHTDRGSQFRSRKLVHQLNRHQMVGSMGRVGAAGDNAAMESFFSLLQKNVLD
RRVWNTREELRIAIVTWIERTYHRRRRQAALGRLTPVEYELIMKPAATQAA

Sequences:

>Translated_131_residues
MKSRIAVAALDNAVARRGAEGVDVAGCLLHTDRGSQFRSRKLVHQLNRHQMVGSMGRVGAAGDNAAMESFFSLLQKNVLD
RRVWNTREELRIAIVTWIERTYHRRRRQAALGRLTPVEYELIMKPAATQAA
>Mature_131_residues
MKSRIAVAALDNAVARRGAEGVDVAGCLLHTDRGSQFRSRKLVHQLNRHQMVGSMGRVGAAGDNAAMESFFSLLQKNVLD
RRVWNTREELRIAIVTWIERTYHRRRRQAALGRLTPVEYELIMKPAATQAA

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=120, Percent_Identity=35.8333333333333, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1787263, Length=120, Percent_Identity=35.8333333333333, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1786753, Length=120, Percent_Identity=35.8333333333333, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1786570, Length=120, Percent_Identity=35.8333333333333, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1786490, Length=120, Percent_Identity=35.8333333333333, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 14739; Mature: 14739

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRIAVAALDNAVARRGAEGVDVAGCLLHTDRGSQFRSRKLVHQLNRHQMVGSMGRVGA
CCCCHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AGDNAAMESFFSLLQKNVLDRRVWNTREELRIAIVTWIERTYHRRRRQAALGRLTPVEYE
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LIMKPAATQAA
HHCCCCCCCCC
>Mature Secondary Structure
MKSRIAVAALDNAVARRGAEGVDVAGCLLHTDRGSQFRSRKLVHQLNRHQMVGSMGRVGA
CCCCHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AGDNAAMESFFSLLQKNVLDRRVWNTREELRIAIVTWIERTYHRRRRQAALGRLTPVEYE
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LIMKPAATQAA
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]