| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is mtnU [H]
Identifier: 119714856
GI number: 119714856
Start: 631032
End: 631874
Strand: Direct
Name: mtnU [H]
Synonym: Noca_0597
Alternate gene names: 119714856
Gene position: 631032-631874 (Clockwise)
Preceding gene: 119714855
Following gene: 119714860
Centisome position: 12.66
GC content: 65.95
Gene sequence:
>843_bases GTGACCAGCGGGGACGGCTCGCGCACGAATCGTCTGCGCGTTGCCCTGCTTCAGGTCGCTTATGGCGACGACGAGAGTCT GTCCGATCGGGTTCAGCGAGTCAGTCAATGGATCCGCGAGGTCGGACCCGCAGACCTGGTGGTGCTCCCGGAGCTCTGGG CGCACGGCGGCTTCGCATCCACGACGTGGCGGGCGACAGCGGAGCTCATGAACGGACCGACCATCGCGCAGATGGCCTCG GTTGCCCGCGAGGTCGGTGTCTGGCTGCACGCGGGATCCATCATTGAGCGAGCAGAGGACGGCGCCGATCGCGGTGCCGA GAGACGCGGACTGTGGAACACTTCTGTGCTGATCTCTCCGCAGGGCACCGTCCACAAGACGTACCGGAAGATCCACCGCT TCGGCTTCGGCGACGGTGAACCGCGCGTTTTGGAAGCCGGCACGGACCTCGCTGTTGCCGAGCTGGTGCACGATACGGGT GCGAGTCGCGTCGGCATGGCGACCTGCTATGACCTCCGGTTCCCGGAACTCTTCCGCCGGCTCGGCGATCTCGGTGCCGA CGTGATCGTGCTTCCGGCGGCGTGGCCGATGCGCAGAGTGGAGCACTGGCGGTTACTCGGACGGGCGAGAGCCTTGGAGA ACCAAGCCTGGGTGCTCCAGTGCAACACCGCCGGCACGCACAGTGGGCTGGATATGGGAGGCCATTCCCAGGTCGTCGCC CCTACCGGTGAAGTCGTCGCCGAGCTGGGGAGCGATGAGGACGTCCTGCTCACCGACATCGATCTGAACCTCGTCGCTTC TGTCAGAGCGGACTTTCCCGTCCTGGCCGACCGCAGGATCTAG
Upstream 100 bases:
>100_bases CACCATTCGGCGTGGTGTTGCGCGACCTGCCACTGACGCCTGAGAAGGTGCTTGGTGCCATGTCTGGAGCGAAGGTAGCG ACCGGTTTGGCAGAGCGGTC
Downstream 100 bases:
>100_bases ACATACGGTTGCTCAGCCCGGCGGCCGGAAGTAGTAGTACTGACTGATTGACCCGTGCTGACCTGCGCAAACGTCGACGG CATTCGACAGTCTGTGCCAC
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTSGDGSRTNRLRVALLQVAYGDDESLSDRVQRVSQWIREVGPADLVVLPELWAHGGFASTTWRATAELMNGPTIAQMAS VAREVGVWLHAGSIIERAEDGADRGAERRGLWNTSVLISPQGTVHKTYRKIHRFGFGDGEPRVLEAGTDLAVAELVHDTG ASRVGMATCYDLRFPELFRRLGDLGADVIVLPAAWPMRRVEHWRLLGRARALENQAWVLQCNTAGTHSGLDMGGHSQVVA PTGEVVAELGSDEDVLLTDIDLNLVASVRADFPVLADRRI
Sequences:
>Translated_280_residues MTSGDGSRTNRLRVALLQVAYGDDESLSDRVQRVSQWIREVGPADLVVLPELWAHGGFASTTWRATAELMNGPTIAQMAS VAREVGVWLHAGSIIERAEDGADRGAERRGLWNTSVLISPQGTVHKTYRKIHRFGFGDGEPRVLEAGTDLAVAELVHDTG ASRVGMATCYDLRFPELFRRLGDLGADVIVLPAAWPMRRVEHWRLLGRARALENQAWVLQCNTAGTHSGLDMGGHSQVVA PTGEVVAELGSDEDVLLTDIDLNLVASVRADFPVLADRRI >Mature_279_residues TSGDGSRTNRLRVALLQVAYGDDESLSDRVQRVSQWIREVGPADLVVLPELWAHGGFASTTWRATAELMNGPTIAQMASV AREVGVWLHAGSIIERAEDGADRGAERRGLWNTSVLISPQGTVHKTYRKIHRFGFGDGEPRVLEAGTDLAVAELVHDTGA SRVGMATCYDLRFPELFRRLGDLGADVIVLPAAWPMRRVEHWRLLGRARALENQAWVLQCNTAGTHSGLDMGGHSQVVAP TGEVVAELGSDEDVLLTDIDLNLVASVRADFPVLADRRI
Specific function: May be involved in a regulatory step in the methylthioribose (MTR) recycling pathway [H]
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=278, Percent_Identity=33.0935251798561, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI297632348, Length=273, Percent_Identity=31.5018315018315, Blast_Score=120, Evalue=9e-28, Organism=Homo sapiens, GI297632350, Length=273, Percent_Identity=31.5018315018315, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI5031947, Length=273, Percent_Identity=31.5018315018315, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI297632346, Length=187, Percent_Identity=28.8770053475936, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1786412, Length=236, Percent_Identity=33.4745762711864, Blast_Score=94, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17556280, Length=278, Percent_Identity=30.5755395683453, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323383, Length=292, Percent_Identity=28.0821917808219, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6322335, Length=309, Percent_Identity=26.537216828479, Blast_Score=94, Evalue=3e-20, Organism=Drosophila melanogaster, GI21355835, Length=283, Percent_Identity=30.3886925795053, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI17933642, Length=271, Percent_Identity=29.8892988929889, Blast_Score=113, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 3.5.-.- [C]
Molecular weight: Translated: 30536; Mature: 30405
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGDGSRTNRLRVALLQVAYGDDESLSDRVQRVSQWIREVGPADLVVLPELWAHGGFAS CCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCCC TTWRATAELMNGPTIAQMASVAREVGVWLHAGSIIERAEDGADRGAERRGLWNTSVLISP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCHHHCCCCCCEEEECC QGTVHKTYRKIHRFGFGDGEPRVLEAGTDLAVAELVHDTGASRVGMATCYDLRFPELFRR CCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHEECCCHHHHHHH LGDLGADVIVLPAAWPMRRVEHWRLLGRARALENQAWVLQCNTAGTHSGLDMGGHSQVVA HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEC PTGEVVAELGSDEDVLLTDIDLNLVASVRADFPVLADRRI CCHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TSGDGSRTNRLRVALLQVAYGDDESLSDRVQRVSQWIREVGPADLVVLPELWAHGGFAS CCCCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCCC TTWRATAELMNGPTIAQMASVAREVGVWLHAGSIIERAEDGADRGAERRGLWNTSVLISP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCHHHCCCCCCEEEECC QGTVHKTYRKIHRFGFGDGEPRVLEAGTDLAVAELVHDTGASRVGMATCYDLRFPELFRR CCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHEECCCHHHHHHH LGDLGADVIVLPAAWPMRRVEHWRLLGRARALENQAWVLQCNTAGTHSGLDMGGHSQVVA HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEC PTGEVVAELGSDEDVLLTDIDLNLVASVRADFPVLADRRI CCHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 12022921 [H]