| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cutL [H]
Identifier: 119714855
GI number: 119714855
Start: 628630
End: 631035
Strand: Direct
Name: cutL [H]
Synonym: Noca_0596
Alternate gene names: 119714855
Gene position: 628630-631035 (Clockwise)
Preceding gene: 119714854
Following gene: 119714856
Centisome position: 12.61
GC content: 63.38
Gene sequence:
>2406_bases GTGAAGAAGCTCGACAGTCACCAGCACATGAAGACGCCGGTCGTCGCTGCTCGGTCGGTCGGGACCCGAGTGCTGCGGTC TGAAGACCCGCGGTTGCTCACCGGCCGAGGTGAGTTCATCGCCGATATCGACCTCCCGCGCCAGCTCCACGTGGCTTTCA TACGAAGTCCTGTTGCACACGCACGAATCACTAATCTCGACTTGTCCGCAATCCGCGACGCGGACGGCGTGGCACTGGCG TGGTCCGGCAAGGACGTCGCCCCCTTCTGCGAGGGCCTCGTCGGCGAGATGGCGGTTGAAGGCTGCTTTCCGACCACGAT GCCGCTGCTCGCGGGAGATGAAGTCGTCTACGTCGGTGAGCCTGTCGCCGTGGTCGTGGCTGACTCGCGCTACGCGGCAG AGGACGCTTGTGAACTGATCGATTGGGACTTCGACGAGCTGCCTGCCGTCACCAACGTGGACGCAGCCGCCGGTGGCGGT CCAGTCGCGAACCCGCAGCTGCCCGATAACATCGGACTCAACGGTGGCGCGAGCTTCGGTGACGTTTCAGGAGCCTTCGA ACAGGCCCACCAGGTCGTCGAGGGTCGGTTCTACACCTGCCGTGTCTCGGCGGCTCCTATGGAGACGCGCGGCGTGATCG CCGACTACGAATGGGCGTCGAAGGCGCTACGTCTGTGGTCGAACACCCAGATGCCGCACTATCTGAAGTACATGCTGACG GCGTACCTCGGTTTCCCGGAGCAAAGCGTCGAAGTCATCACTCCCGACACCGGCGGTGGGTTCGGCTTGAAGGCGCACGT CTATCCCGAAGAGATGTTGCTGCCACTCATCGCCAGGGAAGTCGGCCGGCCTGTCAAGTGGATCGAAGACCGTCGAGAGA ACCTCATCGCCGGCGCACACGCGCATGAGCAGTACGTTGACATCGCGTACGCGCTCGATGCCGACGGCAAGATCACAGGA GTCCGTACACACGCGCTCGGTGACGGCGGGGCGTATCACCTGCCACCATGGTCGATGGCCGTGGAGCCGTGGTGTGCCGC AGTGATGACCCCCACCGGCATCTACGACGTACCGGCTGTGGAGTACACCTACAAGGCCGCGGCCACCAACAAGACGCCCG TCGGCGCCTACCGCGGGGTGGGCTACATGGCCGGGACATTCGCTCGTGAGTGCCTCGCCGACGATGCCGCGCGTGCACTG CGCATGTCGCCCTTCGACTTCCGTCGACACAATGTCGTTCGCGAGTTCCCGTGGACCAATCCTCAGGGCATTGTTTACCA GGAGGGAAGCTGGCTGCAGACAATCGACGCACTCGAGGAGATGGTCGACTACCCGGCCTTTCTGCGTCGGCAGACCGAGC TGCGCAAGGAGGGGCGCTACATCGGGCTGGGCCTCAGCTGCTTCGTCGAGAGCAGCGGCGAGAGTACGGCGACCAGCCTC GAGCACGGACTCGGCGACGTTTACCATGACACCGCCACAGTCCGGCTGAACCCCAATGGCACCGCCAACGTGACGATCGG TCTGTCGGCGCAGGGCCAAGGACTCGCCACGACCATGGCCCAGATGGCAGCCGACACCTTGGGCATCAAGGTGGAGGACG TCAGCGTCCAGACAGCGCGGTCGACCTCTCACGCCTACGGCTCAGGCACCCTCGGTAGCCGCGGCGCAGTCGTTGCAGGT GGAGCCGTGTCACGAGCAGCAGACGTCGTCAGAGAGAAGGTGCGGCAGGTAGCCGCCCACATGCTCGAAGCATCGACCGA TGACATCGAGCTGGTAGACGGTCTCGCTTCGATCAAGGGCATCTCGGACGCCTCGTTGTCCATCGCCGACGTTGCCACCG CAATCTATTTCGACCTCGACTCGTGGCCAGAGGACTTCGAGCCAACCCTCGAAGCCACCCAGGCCTACGATCCTTCCCAG GCGATGTTCAGCAACGGCGGCCACGCGATCATGGTGGAACTAGATGCCGAGACCGGCTTCGTGCGCTTCGAGAAGATCTT TTCAGTCGAAGACTGCGGCACGGTCATCAACCCCAACATCGTAGAGGGACAGATCCGCGGCGGAGTCATACAAGGCATCG GTGCATCCGTATTCGAGGAACTAGCCTATGACGAGTCTGGCCAGATTCTCACTACCACTTTCCTCGACTACGGACTGCCG ACAATGGACGTCGCCCCGCCGTTCGAGATCAACCACCTCGAGACGCCCTCCTCGCACTCCGCCTCGGGCGTGAAGGGGAT GGGAGAGTCGGGCCTCATCGCGGCTCCCGCTGCGGTTCTGAACGCCGTCAACGACGCCCTTTCACCATTCGGCGTGGTGT TGCGCGACCTGCCACTGACGCCTGAGAAGGTGCTTGGTGCCATGTCTGGAGCGAAGGTAGCGACCGGTTTGGCAGAGCGG TCGTGA
Upstream 100 bases:
>100_bases CGATGTCGGGTTCGCTATGTCGATGCACGGGATACCAGACCATCATCTCTGCCATCGAACAAGCGGCGGCCGAGGGTCAG AGCGACACGGAGGACGACCA
Downstream 100 bases:
>100_bases CCAGCGGGGACGGCTCGCGCACGAATCGTCTGCGCGTTGCCCTGCTTCAGGTCGCTTATGGCGACGACGAGAGTCTGTCC GATCGGGTTCAGCGAGTCAG
Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MKKLDSHQHMKTPVVAARSVGTRVLRSEDPRLLTGRGEFIADIDLPRQLHVAFIRSPVAHARITNLDLSAIRDADGVALA WSGKDVAPFCEGLVGEMAVEGCFPTTMPLLAGDEVVYVGEPVAVVVADSRYAAEDACELIDWDFDELPAVTNVDAAAGGG PVANPQLPDNIGLNGGASFGDVSGAFEQAHQVVEGRFYTCRVSAAPMETRGVIADYEWASKALRLWSNTQMPHYLKYMLT AYLGFPEQSVEVITPDTGGGFGLKAHVYPEEMLLPLIAREVGRPVKWIEDRRENLIAGAHAHEQYVDIAYALDADGKITG VRTHALGDGGAYHLPPWSMAVEPWCAAVMTPTGIYDVPAVEYTYKAAATNKTPVGAYRGVGYMAGTFARECLADDAARAL RMSPFDFRRHNVVREFPWTNPQGIVYQEGSWLQTIDALEEMVDYPAFLRRQTELRKEGRYIGLGLSCFVESSGESTATSL EHGLGDVYHDTATVRLNPNGTANVTIGLSAQGQGLATTMAQMAADTLGIKVEDVSVQTARSTSHAYGSGTLGSRGAVVAG GAVSRAADVVREKVRQVAAHMLEASTDDIELVDGLASIKGISDASLSIADVATAIYFDLDSWPEDFEPTLEATQAYDPSQ AMFSNGGHAIMVELDAETGFVRFEKIFSVEDCGTVINPNIVEGQIRGGVIQGIGASVFEELAYDESGQILTTTFLDYGLP TMDVAPPFEINHLETPSSHSASGVKGMGESGLIAAPAAVLNAVNDALSPFGVVLRDLPLTPEKVLGAMSGAKVATGLAER S
Sequences:
>Translated_801_residues MKKLDSHQHMKTPVVAARSVGTRVLRSEDPRLLTGRGEFIADIDLPRQLHVAFIRSPVAHARITNLDLSAIRDADGVALA WSGKDVAPFCEGLVGEMAVEGCFPTTMPLLAGDEVVYVGEPVAVVVADSRYAAEDACELIDWDFDELPAVTNVDAAAGGG PVANPQLPDNIGLNGGASFGDVSGAFEQAHQVVEGRFYTCRVSAAPMETRGVIADYEWASKALRLWSNTQMPHYLKYMLT AYLGFPEQSVEVITPDTGGGFGLKAHVYPEEMLLPLIAREVGRPVKWIEDRRENLIAGAHAHEQYVDIAYALDADGKITG VRTHALGDGGAYHLPPWSMAVEPWCAAVMTPTGIYDVPAVEYTYKAAATNKTPVGAYRGVGYMAGTFARECLADDAARAL RMSPFDFRRHNVVREFPWTNPQGIVYQEGSWLQTIDALEEMVDYPAFLRRQTELRKEGRYIGLGLSCFVESSGESTATSL EHGLGDVYHDTATVRLNPNGTANVTIGLSAQGQGLATTMAQMAADTLGIKVEDVSVQTARSTSHAYGSGTLGSRGAVVAG GAVSRAADVVREKVRQVAAHMLEASTDDIELVDGLASIKGISDASLSIADVATAIYFDLDSWPEDFEPTLEATQAYDPSQ AMFSNGGHAIMVELDAETGFVRFEKIFSVEDCGTVINPNIVEGQIRGGVIQGIGASVFEELAYDESGQILTTTFLDYGLP TMDVAPPFEINHLETPSSHSASGVKGMGESGLIAAPAAVLNAVNDALSPFGVVLRDLPLTPEKVLGAMSGAKVATGLAER S >Mature_801_residues MKKLDSHQHMKTPVVAARSVGTRVLRSEDPRLLTGRGEFIADIDLPRQLHVAFIRSPVAHARITNLDLSAIRDADGVALA WSGKDVAPFCEGLVGEMAVEGCFPTTMPLLAGDEVVYVGEPVAVVVADSRYAAEDACELIDWDFDELPAVTNVDAAAGGG PVANPQLPDNIGLNGGASFGDVSGAFEQAHQVVEGRFYTCRVSAAPMETRGVIADYEWASKALRLWSNTQMPHYLKYMLT AYLGFPEQSVEVITPDTGGGFGLKAHVYPEEMLLPLIAREVGRPVKWIEDRRENLIAGAHAHEQYVDIAYALDADGKITG VRTHALGDGGAYHLPPWSMAVEPWCAAVMTPTGIYDVPAVEYTYKAAATNKTPVGAYRGVGYMAGTFARECLADDAARAL RMSPFDFRRHNVVREFPWTNPQGIVYQEGSWLQTIDALEEMVDYPAFLRRQTELRKEGRYIGLGLSCFVESSGESTATSL EHGLGDVYHDTATVRLNPNGTANVTIGLSAQGQGLATTMAQMAADTLGIKVEDVSVQTARSTSHAYGSGTLGSRGAVVAG GAVSRAADVVREKVRQVAAHMLEASTDDIELVDGLASIKGISDASLSIADVATAIYFDLDSWPEDFEPTLEATQAYDPSQ AMFSNGGHAIMVELDAETGFVRFEKIFSVEDCGTVINPNIVEGQIRGGVIQGIGASVFEELAYDESGQILTTTFLDYGLP TMDVAPPFEINHLETPSSHSASGVKGMGESGLIAAPAAVLNAVNDALSPFGVVLRDLPLTPEKVLGAMSGAKVATGLAER S
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=774, Percent_Identity=23.9018087855297, Blast_Score=156, Evalue=7e-38, Organism=Homo sapiens, GI71773480, Length=774, Percent_Identity=24.031007751938, Blast_Score=143, Evalue=6e-34, Organism=Escherichia coli, GI1789230, Length=764, Percent_Identity=29.4502617801047, Blast_Score=256, Evalue=4e-69, Organism=Escherichia coli, GI1789246, Length=820, Percent_Identity=25.609756097561, Blast_Score=206, Evalue=5e-54, Organism=Escherichia coli, GI1786478, Length=797, Percent_Identity=25.7214554579674, Blast_Score=134, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17540638, Length=789, Percent_Identity=22.3067173637516, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17539860, Length=786, Percent_Identity=21.882951653944, Blast_Score=126, Evalue=4e-29, Organism=Caenorhabditis elegans, GI32566215, Length=789, Percent_Identity=21.2927756653992, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI17737937, Length=784, Percent_Identity=23.9795918367347, Blast_Score=140, Evalue=4e-33, Organism=Drosophila melanogaster, GI24647197, Length=775, Percent_Identity=22.4516129032258, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI24647195, Length=777, Percent_Identity=22.3938223938224, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 85550; Mature: 85550
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00449 ATPASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLDSHQHMKTPVVAARSVGTRVLRSEDPRLLTGRGEFIADIDLPRQLHVAFIRSPVAH CCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCHHHHHHHHHCCHHH ARITNLDLSAIRDADGVALAWSGKDVAPFCEGLVGEMAVEGCFPTTMPLLAGDEVVYVGE HEEECCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECC PVAVVVADSRYAAEDACELIDWDFDELPAVTNVDAAAGGGPVANPQLPDNIGLNGGASFG CEEEEEECCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVSGAFEQAHQVVEGRFYTCRVSAAPMETRGVIADYEWASKALRLWSNTQMPHYLKYMLT CHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHH AYLGFPEQSVEVITPDTGGGFGLKAHVYPEEMLLPLIAREVGRPVKWIEDRRENLIAGAH HHHCCCCCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCC AHEQYVDIAYALDADGKITGVRTHALGDGGAYHLPPWSMAVEPWCAAVMTPTGIYDVPAV CHHHHEEEEEEECCCCEEEEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCC EYTYKAAATNKTPVGAYRGVGYMAGTFARECLADDAARALRMSPFDFRRHNVVREFPWTN EEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHCCCCC PQGIVYQEGSWLQTIDALEEMVDYPAFLRRQTELRKEGRYIGLGLSCFVESSGESTATSL CCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHH EHGLGDVYHDTATVRLNPNGTANVTIGLSAQGQGLATTMAQMAADTLGIKVEDVSVQTAR HHCCCHHCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCEEEEECEEEECC STSHAYGSGTLGSRGAVVAGGAVSRAADVVREKVRQVAAHMLEASTDDIELVDGLASIKG CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ISDASLSIADVATAIYFDLDSWPEDFEPTLEATQAYDPSQAMFSNGGHAIMVELDAETGF CCCCCCHHHHHHEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCE VRFEKIFSVEDCGTVINPNIVEGQIRGGVIQGIGASVFEELAYDESGQILTTTFLDYGLP EEHHHHCCHHHCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHCCCCCCEEEEEEHHCCCC TMDVAPPFEINHLETPSSHSASGVKGMGESGLIAAPAAVLNAVNDALSPFGVVLRDLPLT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCC PEKVLGAMSGAKVATGLAERS HHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MKKLDSHQHMKTPVVAARSVGTRVLRSEDPRLLTGRGEFIADIDLPRQLHVAFIRSPVAH CCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCHHHHHHHHHCCHHH ARITNLDLSAIRDADGVALAWSGKDVAPFCEGLVGEMAVEGCFPTTMPLLAGDEVVYVGE HEEECCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECC PVAVVVADSRYAAEDACELIDWDFDELPAVTNVDAAAGGGPVANPQLPDNIGLNGGASFG CEEEEEECCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVSGAFEQAHQVVEGRFYTCRVSAAPMETRGVIADYEWASKALRLWSNTQMPHYLKYMLT CHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHH AYLGFPEQSVEVITPDTGGGFGLKAHVYPEEMLLPLIAREVGRPVKWIEDRRENLIAGAH HHHCCCCCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCC AHEQYVDIAYALDADGKITGVRTHALGDGGAYHLPPWSMAVEPWCAAVMTPTGIYDVPAV CHHHHEEEEEEECCCCEEEEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCC EYTYKAAATNKTPVGAYRGVGYMAGTFARECLADDAARALRMSPFDFRRHNVVREFPWTN EEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHCCCCC PQGIVYQEGSWLQTIDALEEMVDYPAFLRRQTELRKEGRYIGLGLSCFVESSGESTATSL CCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHH EHGLGDVYHDTATVRLNPNGTANVTIGLSAQGQGLATTMAQMAADTLGIKVEDVSVQTAR HHCCCHHCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCEEEEECEEEECC STSHAYGSGTLGSRGAVVAGGAVSRAADVVREKVRQVAAHMLEASTDDIELVDGLASIKG CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ISDASLSIADVATAIYFDLDSWPEDFEPTLEATQAYDPSQAMFSNGGHAIMVELDAETGF CCCCCCHHHHHHEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCE VRFEKIFSVEDCGTVINPNIVEGQIRGGVIQGIGASVFEELAYDESGQILTTTFLDYGLP EEHHHHCCHHHCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHCCCCCCEEEEEEHHCCCC TMDVAPPFEINHLETPSSHSASGVKGMGESGLIAAPAAVLNAVNDALSPFGVVLRDLPLT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCC PEKVLGAMSGAKVATGLAERS HHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]