Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is sbpA [H]

Identifier: 119714802

GI number: 119714802

Start: 572921

End: 573958

Strand: Direct

Name: sbpA [H]

Synonym: Noca_0538

Alternate gene names: 119714802

Gene position: 572921-573958 (Clockwise)

Preceding gene: 119714798

Following gene: 119714803

Centisome position: 11.49

GC content: 69.46

Gene sequence:

>1038_bases
ATGAAGACTTCGATCAAGGTGGCGGCGGCCGCGTTCGCCGGGGTGCTTGCCTTGACCGGCTGCTCCGCCTCTGCGGACGG
CGACGCCGACGAGACCGTCAACGTCAACGCGTTCTCGGTGATGGAGGCGGCCAACGAGCCCGTCTTCGCCGACTTCGCGG
CCACGGAGGAGGGCAAGGGGGTTCGGTTCGAGACGTCGTACGGCGCCTCCGGTGACCAGAGCCGTGCCGTCGTGGCCGGC
GCGGCCGCGGACGTCGTGCACTACTCCCTCGAGACCGACGTGACCCGGCTCGTCGACGAGGGCCTGGTGGCCGAGGACTG
GAAGGACGATGCGACCAACGGCATCGCGACGTCGTCGGTCGTCGTGTTCGTGGTCCGCAAGGGCAACCCCGAGAACATCC
AGACCTGGGACGACCTGGTCAAGCCCGGCGTCGAGATCATCACGCCCAACCCGGGCTCGTCCGGCTCGGCCCGCTGGAAC
ATCCTGGCCGCCTGGGCGCACGTGACCGGAAACGGCGGCAGCGCTGAGGACGCGAAGTCGTTCCTCACCCGGCTGCTCGA
CAACACGATCGCCCTCCCGGGCTCTGGCCGGGAGGCCACCACGGCCTTCACCGACGGCTCCGGCGATGTGCTGCTCTCCT
ACGAGAACGAGGCGATCCTCGCCAAGCAGAGCGGCGCGGACGTCGACTACGTGCTGCCGCCGGACACGCTGCTGATCGAG
AACCCGGCCGCCGTCACCGTCGACGCGGACGAGACCGCCCAGGCGTTCCTCGAGTTCATGACCTCGCCGGAGGCGCAGGC
CGACTACGCCCAGTCGGGCTTCCGCCCGGTCGTCGACGGCGTCGACATCGGTGCGGTCGAGGGCGCCAACGATCCGTCGG
ACCCGTTCCCCGCACCCGACCGGCTGTTCACGATCGACGGCGACTTCGGGGGTTGGGGTGAGGCAGCCGACAAGTACTTC
GGTGACGGCGAGGAGGGGCACCCCCTCGGCATCATCACCGAGCTGCAGCAGCAGACCGGCAAGGTGGGCGAGGAGTAA

Upstream 100 bases:

>100_bases
ATCGCCCCGTCTGGTCCAGATGTCGGTCAAGTCTCTTAAGTCGAGTAGGCTGCTCGTCATAATCGAGACACGCCTCTTTT
GGAGGCGGGAAAGAGACGAG

Downstream 100 bases:

>100_bases
TGCCCACTGCCCTCCTGGAGGGGCCGCGCGACAGCGCCGAGCCGGCGTCCCATGGGGGACGCCGGCGTCGGCGCGCCCGT
CGTACGGCTCGGCGCAACAC

Product: sulfate ABC transporter, periplasmic sulfate-binding protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKTSIKVAAAAFAGVLALTGCSASADGDADETVNVNAFSVMEAANEPVFADFAATEEGKGVRFETSYGASGDQSRAVVAG
AAADVVHYSLETDVTRLVDEGLVAEDWKDDATNGIATSSVVVFVVRKGNPENIQTWDDLVKPGVEIITPNPGSSGSARWN
ILAAWAHVTGNGGSAEDAKSFLTRLLDNTIALPGSGREATTAFTDGSGDVLLSYENEAILAKQSGADVDYVLPPDTLLIE
NPAAVTVDADETAQAFLEFMTSPEAQADYAQSGFRPVVDGVDIGAVEGANDPSDPFPAPDRLFTIDGDFGGWGEAADKYF
GDGEEGHPLGIITELQQQTGKVGEE

Sequences:

>Translated_345_residues
MKTSIKVAAAAFAGVLALTGCSASADGDADETVNVNAFSVMEAANEPVFADFAATEEGKGVRFETSYGASGDQSRAVVAG
AAADVVHYSLETDVTRLVDEGLVAEDWKDDATNGIATSSVVVFVVRKGNPENIQTWDDLVKPGVEIITPNPGSSGSARWN
ILAAWAHVTGNGGSAEDAKSFLTRLLDNTIALPGSGREATTAFTDGSGDVLLSYENEAILAKQSGADVDYVLPPDTLLIE
NPAAVTVDADETAQAFLEFMTSPEAQADYAQSGFRPVVDGVDIGAVEGANDPSDPFPAPDRLFTIDGDFGGWGEAADKYF
GDGEEGHPLGIITELQQQTGKVGEE
>Mature_345_residues
MKTSIKVAAAAFAGVLALTGCSASADGDADETVNVNAFSVMEAANEPVFADFAATEEGKGVRFETSYGASGDQSRAVVAG
AAADVVHYSLETDVTRLVDEGLVAEDWKDDATNGIATSSVVVFVVRKGNPENIQTWDDLVKPGVEIITPNPGSSGSARWN
ILAAWAHVTGNGGSAEDAKSFLTRLLDNTIALPGSGREATTAFTDGSGDVLLSYENEAILAKQSGADVDYVLPPDTLLIE
NPAAVTVDADETAQAFLEFMTSPEAQADYAQSGFRPVVDGVDIGAVEGANDPSDPFPAPDRLFTIDGDFGGWGEAADKYF
GDGEEGHPLGIITELQQQTGKVGEE

Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]

COG id: COG1613

COG function: function code P; ABC-type sulfate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]

Homologues:

Organism=Escherichia coli, GI1790351, Length=286, Percent_Identity=37.4125874125874, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1788765, Length=298, Percent_Identity=34.8993288590604, Blast_Score=151, Evalue=7e-38,

Paralogues:

None

Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR000957
- InterPro:   IPR006311
- InterPro:   IPR005669 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 35860; Mature: 35860

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSIKVAAAAFAGVLALTGCSASADGDADETVNVNAFSVMEAANEPVFADFAATEEGKG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHCCCCEEEEEECCCCCCC
VRFETSYGASGDQSRAVVAGAAADVVHYSLETDVTRLVDEGLVAEDWKDDATNGIATSSV
EEEEECCCCCCCCCCEEEEECHHHHEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEECCEE
VVFVVRKGNPENIQTWDDLVKPGVEIITPNPGSSGSARWNILAAWAHVTGNGGSAEDAKS
EEEEEECCCCCCCCHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHH
FLTRLLDNTIALPGSGREATTAFTDGSGDVLLSYENEAILAKQSGADVDYVLPPDTLLIE
HHHHHHHCCEECCCCCCCCEEEEECCCCCEEEEECCCEEEEECCCCCEEEEECCCEEEEE
NPAAVTVDADETAQAFLEFMTSPEAQADYAQSGFRPVVDGVDIGAVEGANDPSDPFPAPD
CCCEEEEECHHHHHHHHHHHCCCCCHHHHHHCCCEECCCCCCCCEECCCCCCCCCCCCCC
RLFTIDGDFGGWGEAADKYFGDGEEGHPLGIITELQQQTGKVGEE
EEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTSIKVAAAAFAGVLALTGCSASADGDADETVNVNAFSVMEAANEPVFADFAATEEGKG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHCCCCEEEEEECCCCCCC
VRFETSYGASGDQSRAVVAGAAADVVHYSLETDVTRLVDEGLVAEDWKDDATNGIATSSV
EEEEECCCCCCCCCCEEEEECHHHHEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEECCEE
VVFVVRKGNPENIQTWDDLVKPGVEIITPNPGSSGSARWNILAAWAHVTGNGGSAEDAKS
EEEEEECCCCCCCCHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHH
FLTRLLDNTIALPGSGREATTAFTDGSGDVLLSYENEAILAKQSGADVDYVLPPDTLLIE
HHHHHHHCCEECCCCCCCCEEEEECCCCCEEEEECCCEEEEECCCCCEEEEECCCEEEEE
NPAAVTVDADETAQAFLEFMTSPEAQADYAQSGFRPVVDGVDIGAVEGANDPSDPFPAPD
CCCEEEEECHHHHHHHHHHHCCCCCHHHHHHCCCEECCCCCCCCEECCCCCCCCCCCCCC
RLFTIDGDFGGWGEAADKYFGDGEEGHPLGIITELQQQTGKVGEE
EEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1708375 [H]