| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is nhaK [H]
Identifier: 119714775
GI number: 119714775
Start: 541936
End: 543810
Strand: Direct
Name: nhaK [H]
Synonym: Noca_0511
Alternate gene names: 119714775
Gene position: 541936-543810 (Clockwise)
Preceding gene: 119714774
Following gene: 119714779
Centisome position: 10.87
GC content: 72.59
Gene sequence:
>1875_bases ATGGCGGACGTGGACACCGCCCTCTTCCTGGTCGCGCTGGCCGTCGCCGTGCTCGCCGGCGTGGTGGTCGCCGGCCGGAT CGGGGTGCCCGCCCCGCTGCTGCTCGTGGTCGCGGGCGTCGCCGCGTCGTTCCTGCCGTTCCTGCCCGAGGTGCATCTCG AGCCGGACGTCGTGCTGTTCGGGCTCCTGCCGCCGCTGCTCTACTCGGCGGCGATCACGTCCTCGCTCGTGGACTTCAAC GCCAACCGCCGCCCGATCCTGCTGTTGTCGGTCGGCCTCGTCGTCTTCACGACCCTCGGCGTCGGCGTTCTCGTCCACGA GCTGGTGCCCGGCCTGTCCTGGCCGGTCGCGTTCGCGCTCGGGGCGGTCGTCGCGCCACCGGACGCCGTCGCGGCCACCT CCATCGGCCGGCACATCGGGCTCCCCCGCAGGGTCGTGACGATCCTCGAGGGCGAGTCCCTGTTCAACGACGCGACCGCG CTGGTCTCGCTGCAGACCGCCCTCGGGGCAACACTGGTGGGGGTCGAGCTCTGGCGTGTCGGCCTGGACTTCGTGGTCGC CGCGGGCGGGGGCGTGCTGATCGGGGTGGTCGTCTTCCTCGTGGTCGGGGCGATGCGCAGGCGCCTGAGCGATCCGATGC TCGACGTCGCGATGTCCTTCGTGATCCCGTTCACGGCGTTCCTCGCTGCCGAGGAGGTCCACGCGTCGGGCGTCGTGGCC GTCGTGACCGCCGGCCTGCTGCTCGGCCACCGGGCGCCCGTCCTGCAGACCGCGCAGTCGCGGATCGCCGAGCGGATCAA CTGGCGCACGATCGCGTTCCTGCTCGAGAACACCGTGTTCGCGCTGATCGGACTCCAGGCCCGGTGGCTGTTCGACGACC TGGGGGAGAGCACGCTCTCGCCGGCCCGGATCATCGCAGTCTCGGCCGCCACGCTGGTCGCGGTCATCGTGCTGCGGCTC GTGTGGGTCTTCCTCTCGCGCTCGCTGCTGGTCCGCCCGCGCGTGGACCCCGCGACCGGACAGGTTCCGCCGTGGTCGTT CACACTCCTGCTCGGCTGGTCCGGCATGCGCGGGGTGGTCACCCTGGCCGCGGCGTTCCTGATCCCGCCCGACACCCGGC ACCGCGAGGTGCTGCTCGTCGTCGCGTTCGCCGTCGTGGCGGGCACCCTGCTCGTCCAGGGGCTCAGCCTGCCGTGGCTC ACCCGCCGGCTGCACGTCCCCGCCCCGGACCCGCTCGACGACGCGCTCGCCCGCGCCACCCTGCTCCAGCAGGCGTCGAA GGCGGCGGTCGAGGAGCTCGAGCGGCAGGAGTACGACGACCAGGCCGGCGTGGGCGACCTGATCCGGCAACGGCTCGACC AGCGGAACTTCGCCGCGTGGGAGCGCCTGGGGACCACCGCCGACCAGGAGTCACCGGCCGCCGTCTACTACCGCATCCGG ATGGCGATGATCGCCGCCGAGCGCCGACGGATCCTGGAGATCCGGCGCTCCGGCACCGTGGCCTCCGAGGTGATCGCCGA GGTGCTCTCGATGCTCGACGTCGAGGAGTCGATGCTCGACAACGCCCACCAGGAGCGGGACGAGGCCGAGGACTACGCCC GTCGGCGCTGGACGCTCGGGGAGACCTGCGACGACCTGGGCCGCTACCCGGTCGTCGACGCCGAGCCCGCGACGTACTGC CAGGCCTGCCTGGACGAGGGCACCCGCTGGGTGGCGTTGCGCCGCTGCCTGGAGTGCGGCAACCTCGCCTGCTGCGACTC CTCACCCCGCCAGCACGCCACCGCGCACTTCCGGGAGACCCAGCACCCGGTCATGCAGTCCGCCGAGCCCGGCGAGGACT GGCGCTGGTGCTACCTCCACCACCTGACGGCATGA
Upstream 100 bases:
>100_bases GGAGGCCGTCGTACGCCGCGACAACCGGCGCGACCTCGACGAGCGGATCCGCGCGCTGCGTCCCTGACAGTCCGGTCCGT CCGACCGCCGGTCCGCGACA
Downstream 100 bases:
>100_bases GGCGGAGGTGTCGCCGGCTGGCGGGTCGTGTGCCTGAGCACGCTCCATGGCGCGTTCTCAGGCACACGACCCGATCGGCG CCGGGTGCTCGAACCGGATC
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MADVDTALFLVALAVAVLAGVVVAGRIGVPAPLLLVVAGVAASFLPFLPEVHLEPDVVLFGLLPPLLYSAAITSSLVDFN ANRRPILLLSVGLVVFTTLGVGVLVHELVPGLSWPVAFALGAVVAPPDAVAATSIGRHIGLPRRVVTILEGESLFNDATA LVSLQTALGATLVGVELWRVGLDFVVAAGGGVLIGVVVFLVVGAMRRRLSDPMLDVAMSFVIPFTAFLAAEEVHASGVVA VVTAGLLLGHRAPVLQTAQSRIAERINWRTIAFLLENTVFALIGLQARWLFDDLGESTLSPARIIAVSAATLVAVIVLRL VWVFLSRSLLVRPRVDPATGQVPPWSFTLLLGWSGMRGVVTLAAAFLIPPDTRHREVLLVVAFAVVAGTLLVQGLSLPWL TRRLHVPAPDPLDDALARATLLQQASKAAVEELERQEYDDQAGVGDLIRQRLDQRNFAAWERLGTTADQESPAAVYYRIR MAMIAAERRRILEIRRSGTVASEVIAEVLSMLDVEESMLDNAHQERDEAEDYARRRWTLGETCDDLGRYPVVDAEPATYC QACLDEGTRWVALRRCLECGNLACCDSSPRQHATAHFRETQHPVMQSAEPGEDWRWCYLHHLTA
Sequences:
>Translated_624_residues MADVDTALFLVALAVAVLAGVVVAGRIGVPAPLLLVVAGVAASFLPFLPEVHLEPDVVLFGLLPPLLYSAAITSSLVDFN ANRRPILLLSVGLVVFTTLGVGVLVHELVPGLSWPVAFALGAVVAPPDAVAATSIGRHIGLPRRVVTILEGESLFNDATA LVSLQTALGATLVGVELWRVGLDFVVAAGGGVLIGVVVFLVVGAMRRRLSDPMLDVAMSFVIPFTAFLAAEEVHASGVVA VVTAGLLLGHRAPVLQTAQSRIAERINWRTIAFLLENTVFALIGLQARWLFDDLGESTLSPARIIAVSAATLVAVIVLRL VWVFLSRSLLVRPRVDPATGQVPPWSFTLLLGWSGMRGVVTLAAAFLIPPDTRHREVLLVVAFAVVAGTLLVQGLSLPWL TRRLHVPAPDPLDDALARATLLQQASKAAVEELERQEYDDQAGVGDLIRQRLDQRNFAAWERLGTTADQESPAAVYYRIR MAMIAAERRRILEIRRSGTVASEVIAEVLSMLDVEESMLDNAHQERDEAEDYARRRWTLGETCDDLGRYPVVDAEPATYC QACLDEGTRWVALRRCLECGNLACCDSSPRQHATAHFRETQHPVMQSAEPGEDWRWCYLHHLTA >Mature_623_residues ADVDTALFLVALAVAVLAGVVVAGRIGVPAPLLLVVAGVAASFLPFLPEVHLEPDVVLFGLLPPLLYSAAITSSLVDFNA NRRPILLLSVGLVVFTTLGVGVLVHELVPGLSWPVAFALGAVVAPPDAVAATSIGRHIGLPRRVVTILEGESLFNDATAL VSLQTALGATLVGVELWRVGLDFVVAAGGGVLIGVVVFLVVGAMRRRLSDPMLDVAMSFVIPFTAFLAAEEVHASGVVAV VTAGLLLGHRAPVLQTAQSRIAERINWRTIAFLLENTVFALIGLQARWLFDDLGESTLSPARIIAVSAATLVAVIVLRLV WVFLSRSLLVRPRVDPATGQVPPWSFTLLLGWSGMRGVVTLAAAFLIPPDTRHREVLLVVAFAVVAGTLLVQGLSLPWLT RRLHVPAPDPLDDALARATLLQQASKAAVEELERQEYDDQAGVGDLIRQRLDQRNFAAWERLGTTADQESPAAVYYRIRM AMIAAERRRILEIRRSGTVASEVIAEVLSMLDVEESMLDNAHQERDEAEDYARRRWTLGETCDDLGRYPVVDAEPATYCQ ACLDEGTRWVALRRCLECGNLACCDSSPRQHATAHFRETQHPVMQSAEPGEDWRWCYLHHLTA
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Homo sapiens, GI27734935, Length=423, Percent_Identity=23.1678486997636, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI41872703, Length=415, Percent_Identity=23.855421686747, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI14211919, Length=399, Percent_Identity=23.3082706766917, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI194239733, Length=373, Percent_Identity=25.7372654155496, Blast_Score=81, Evalue=4e-15, Organism=Homo sapiens, GI15529998, Length=560, Percent_Identity=21.0714285714286, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI5454070, Length=423, Percent_Identity=22.2222222222222, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1790501, Length=558, Percent_Identity=28.494623655914, Blast_Score=157, Evalue=2e-39, Organism=Caenorhabditis elegans, GI25147678, Length=436, Percent_Identity=25, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71993582, Length=420, Percent_Identity=23.8095238095238, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71993590, Length=499, Percent_Identity=22.8456913827655, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71999819, Length=410, Percent_Identity=21.9512195121951, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71999817, Length=410, Percent_Identity=21.9512195121951, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71999821, Length=410, Percent_Identity=21.9512195121951, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71987537, Length=520, Percent_Identity=20.9615384615385, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71987535, Length=510, Percent_Identity=21.5686274509804, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71992107, Length=403, Percent_Identity=22.0843672456576, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71992101, Length=403, Percent_Identity=22.0843672456576, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25150332, Length=412, Percent_Identity=21.3592233009709, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71980847, Length=375, Percent_Identity=23.4666666666667, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6320663, Length=346, Percent_Identity=24.8554913294798, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI281360447, Length=359, Percent_Identity=22.8412256267409, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI221510738, Length=379, Percent_Identity=22.9551451187335, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI221510734, Length=379, Percent_Identity=22.9551451187335, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI221510736, Length=385, Percent_Identity=22.8571428571429, Blast_Score=73, Evalue=7e-13, Organism=Drosophila melanogaster, GI221510732, Length=385, Percent_Identity=22.8571428571429, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24585580, Length=385, Percent_Identity=22.8571428571429, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24585578, Length=385, Percent_Identity=22.8571428571429, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI221510740, Length=385, Percent_Identity=22.8571428571429, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 - InterPro: IPR002014 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 67546; Mature: 67415
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50271 ZF_UBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVDTALFLVALAVAVLAGVVVAGRIGVPAPLLLVVAGVAASFLPFLPEVHLEPDVVLF CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH GLLPPLLYSAAITSSLVDFNANRRPILLLSVGLVVFTTLGVGVLVHELVPGLSWPVAFAL HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GAVVAPPDAVAATSIGRHIGLPRRVVTILEGESLFNDATALVSLQTALGATLVGVELWRV CCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLDFVVAAGGGVLIGVVVFLVVGAMRRRLSDPMLDVAMSFVIPFTAFLAAEEVHASGVVA HHHHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VVTAGLLLGHRAPVLQTAQSRIAERINWRTIAFLLENTVFALIGLQARWLFDDLGESTLS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PARIIAVSAATLVAVIVLRLVWVFLSRSLLVRPRVDPATGQVPPWSFTLLLGWSGMRGVV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCHHHH TLAAAFLIPPDTRHREVLLVVAFAVVAGTLLVQGLSLPWLTRRLHVPAPDPLDDALARAT HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCHHHHHHHHH LLQQASKAAVEELERQEYDDQAGVGDLIRQRLDQRNFAAWERLGTTADQESPAAVYYRIR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHH MAMIAAERRRILEIRRSGTVASEVIAEVLSMLDVEESMLDNAHQERDEAEDYARRRWTLG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ETCDDLGRYPVVDAEPATYCQACLDEGTRWVALRRCLECGNLACCDSSPRQHATAHFRET CCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH QHPVMQSAEPGEDWRWCYLHHLTA HHHHHCCCCCCCCCCEEEEEECCC >Mature Secondary Structure ADVDTALFLVALAVAVLAGVVVAGRIGVPAPLLLVVAGVAASFLPFLPEVHLEPDVVLF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH GLLPPLLYSAAITSSLVDFNANRRPILLLSVGLVVFTTLGVGVLVHELVPGLSWPVAFAL HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GAVVAPPDAVAATSIGRHIGLPRRVVTILEGESLFNDATALVSLQTALGATLVGVELWRV CCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLDFVVAAGGGVLIGVVVFLVVGAMRRRLSDPMLDVAMSFVIPFTAFLAAEEVHASGVVA HHHHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VVTAGLLLGHRAPVLQTAQSRIAERINWRTIAFLLENTVFALIGLQARWLFDDLGESTLS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PARIIAVSAATLVAVIVLRLVWVFLSRSLLVRPRVDPATGQVPPWSFTLLLGWSGMRGVV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCHHHH TLAAAFLIPPDTRHREVLLVVAFAVVAGTLLVQGLSLPWLTRRLHVPAPDPLDDALARAT HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCHHHHHHHHH LLQQASKAAVEELERQEYDDQAGVGDLIRQRLDQRNFAAWERLGTTADQESPAAVYYRIR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHH MAMIAAERRRILEIRRSGTVASEVIAEVLSMLDVEESMLDNAHQERDEAEDYARRRWTLG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ETCDDLGRYPVVDAEPATYCQACLDEGTRWVALRRCLECGNLACCDSSPRQHATAHFRET CCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH QHPVMQSAEPGEDWRWCYLHHLTA HHHHHCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA