Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714779

Identifier: 119714779

GI number: 119714779

Start: 546289

End: 546924

Strand: Direct

Name: 119714779

Synonym: Noca_0515

Alternate gene names: NA

Gene position: 546289-546924 (Clockwise)

Preceding gene: 119714775

Following gene: 119714781

Centisome position: 10.96

GC content: 72.01

Gene sequence:

>636_bases
ATGAGGATCACGAAGTTCGGCCACGCCTGCGTCCGGGTCGAGCACGCCGGCACGACGGTCGTCCTCGACCCCGGCGTGTT
CACCGACCCCGCCGCCCTGGACGGGGCGGATGCGGTGCTGATCACCCACGAGCACGCCGACCACTACCTGCCCGACCACC
TGCTCGCCACCGACGCTCCGGTGTTCACGATCGAGGCCGTGGCGGCCCACGTCCGCGAGGACGTCCCGGCGGTGGCCGAG
CGGCTCACCGTCGTCGCCCCCGGCGAGACCTTCGACGTCGGCGTCCCGGTGCGCGCCGTCGGGGAGCTGCACGCGGTGAT
CCACCCGGAGTTCCCGCGGTTCTTCAACAGCGGCTACGTGCTCACCCTCGGGGACCGCAAGGTGTACCACCCTGGCGACG
CCCTGACCGAGCCCGGCGAGGACGTCGACGTGCTGCTGGTGCCCGTGTCCGGGCCGTGGCTGAAGGCGTCCGAGGCGATC
GACTTCGCCCGGGCCGTGAGGGCGCCGCGCAACCTGGCCATCCACGACCGGGTCTACAGCGAGGCCGGCCTCGGCATCAT
CGACGGGCACATGGACAAGTTCCTCCCGAAGGAGGGCCTGGAGTACGTCCGGCGCCCCGACGGCCACGACCTGTAG

Upstream 100 bases:

>100_bases
GATCGCCCAGCCGGTGACGAGACCGGAGAGGACCACCTCGAGCACCCTGGGATCATCCCGGGACCCGGACGGCGAGGGCC
ACCGGATTACCGTGGGCCGC

Downstream 100 bases:

>100_bases
CCCGGGCGCCGCGGGGTCGGTTTCCCCGGTGAACCGGGGAAACCGGAACTGTTGACCCGAAACTTCGGGCCAGAAGTTCC
AACTTCCCCGGTGAACCGGG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRITKFGHACVRVEHAGTTVVLDPGVFTDPAALDGADAVLITHEHADHYLPDHLLATDAPVFTIEAVAAHVREDVPAVAE
RLTVVAPGETFDVGVPVRAVGELHAVIHPEFPRFFNSGYVLTLGDRKVYHPGDALTEPGEDVDVLLVPVSGPWLKASEAI
DFARAVRAPRNLAIHDRVYSEAGLGIIDGHMDKFLPKEGLEYVRRPDGHDL

Sequences:

>Translated_211_residues
MRITKFGHACVRVEHAGTTVVLDPGVFTDPAALDGADAVLITHEHADHYLPDHLLATDAPVFTIEAVAAHVREDVPAVAE
RLTVVAPGETFDVGVPVRAVGELHAVIHPEFPRFFNSGYVLTLGDRKVYHPGDALTEPGEDVDVLLVPVSGPWLKASEAI
DFARAVRAPRNLAIHDRVYSEAGLGIIDGHMDKFLPKEGLEYVRRPDGHDL
>Mature_211_residues
MRITKFGHACVRVEHAGTTVVLDPGVFTDPAALDGADAVLITHEHADHYLPDHLLATDAPVFTIEAVAAHVREDVPAVAE
RLTVVAPGETFDVGVPVRAVGELHAVIHPEFPRFFNSGYVLTLGDRKVYHPGDALTEPGEDVDVLLVPVSGPWLKASEAI
DFARAVRAPRNLAIHDRVYSEAGLGIIDGHMDKFLPKEGLEYVRRPDGHDL

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 22880; Mature: 22880

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITKFGHACVRVEHAGTTVVLDPGVFTDPAALDGADAVLITHEHADHYLPDHLLATDAP
CCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCC
VFTIEAVAAHVREDVPAVAERLTVVAPGETFDVGVPVRAVGELHAVIHPEFPRFFNSGYV
EEHHHHHHHHHHHCHHHHHHHEEEEECCCEEECCCCHHHHHHHHEEECCCCHHHHCCCEE
LTLGDRKVYHPGDALTEPGEDVDVLLVPVSGPWLKASEAIDFARAVRAPRNLAIHDRVYS
EEECCCEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHH
EAGLGIIDGHMDKFLPKEGLEYVRRPDGHDL
HCCCEEEECCHHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRITKFGHACVRVEHAGTTVVLDPGVFTDPAALDGADAVLITHEHADHYLPDHLLATDAP
CCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCC
VFTIEAVAAHVREDVPAVAERLTVVAPGETFDVGVPVRAVGELHAVIHPEFPRFFNSGYV
EEHHHHHHHHHHHCHHHHHHHEEEEECCCEEECCCCHHHHHHHHEEECCCCHHHHCCCEE
LTLGDRKVYHPGDALTEPGEDVDVLLVPVSGPWLKASEAIDFARAVRAPRNLAIHDRVYS
EEECCCEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHH
EAGLGIIDGHMDKFLPKEGLEYVRRPDGHDL
HCCCEEEECCHHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9348040 [H]