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The map label for this gene is ccsB [H]

Identifier: 119714767

GI number: 119714767

Start: 533802

End: 535400

Strand: Direct

Name: ccsB [H]

Synonym: Noca_0503

Alternate gene names: 119714767

Gene position: 533802-535400 (Clockwise)

Preceding gene: 119714766

Following gene: 119714768

Centisome position: 10.71

GC content: 70.23

Gene sequence:

>1599_bases
ATGAGCACCCCGACCCGCACGTCGCTGAGCACCCGGCCGCCCGAGGACGACCGGCGCCCCGGTGAGCTGACGCTCCGCGA
GCTGCTGCGCTGGACCTGGCGCCAGCTCACCTCGATGCGCACCGCGCTGGTCCTGCTGCTGCTCCTGGCGCTCGCGGCCG
TCCCGGGCTCGATCATCCCGCAGGAGGGCGTCGACTCCCTCAAGACCTCGAACTGGCGGTCCGACCACCCGAAGCTGACG
CCGGTCTACGAGCGGCTCGGGCTGTTCTCCGTCTACGACTCGCCCTGGTTCTCGGCGATCTACCTGCTGCTGATGGTCTC
GCTGGTGGGCTGCATCATCCCGCGCGCGATCCTCTACTGGCGCGGGATGTGGGCCCAGCCCCCGGCGGCCCCCCGCAACC
TGACCCGGCTGCCGGACCACGCGACGTACCAGACCGCCGTCGCACCCGACGCCGTGCTCGAGCGCGCCCGGGCGACCCTG
CGCCGACGGCGCTACCGCCTCTCGCCCGAGGCCGGCGACGCGGTGGCCGCCGAGCGCGGCTACCTGCGCGAGGCCGGCAA
CCTGCTCTTCCACCTGGCCGTGGTCGTGGTGCTGGTCGGCTTCGCGCTCGGCGGGCTGTTCGGCTACAAGGGCGGCGTGA
TCCTGCTGGTCGGCGACGGCTACGGGTTCTCCAACAACCTGACGCAGTACGACGACTTCGACCCCGGAAGCCTGTTCCGG
GACAGCGACATGGAGCCCTTCTCGTTCTCGATCGACGACTTCAGCGTCGAGTGGCTCACCTCCGGCCCACGGGCGGGGAT
GGCGCGCGGGTTCGAGTCGCACCTGACCTACCGCGAGTCGCCGGACGCGCCGGACCGGACCTACGACCTCAAGGTCAACC
ACCCGCTGAGCATCGGCAACACCGACGTCTTCCTCATCGGCCACGGCTACGCGCCGGTGCTCACGATCCGGGACGGCGAC
GGCGAGGAGGTCTACAGCGGTCCGACGATCTTCCTGCCGACCGACCAGAGCTTCCAGTCCATCGGGGTCGTCAAGGCGCC
GGACGCCGAGCCGACGCAGATCGGGCTCGAGGGCGAGTTCTACCCGACCGTCGCGTTCTCGAAGCAGACCGGCAGCTACT
TCTCGCTGTTCGGTCGCCCGCTGGACCCGCTGGTCTCGATGCTCGTCTACACCGGTGACCTCGGCATGGACGACGGCCAG
CCGCAGTCGGTCTACTCCCTGGACAAGTCCAGGACGACGATGCTGACCAAGGCCAACGGCGCGCCGTACCGCATCGACCT
GCGCCCCGGCGAGCAGGTGACTCTCCCCGACGGCCTCGGCACCGTCAGCTTCGACGGCCTCGAGCGCTGGAACAAGATCC
AGATCAGCCAGACGCCGGGCAAGTGGATCGCCCTGATCGGCGTCGTGCTGGCGCTGCTGGGCCTGCTCGGCTCGCTGTTC
ATCCGTCCACGACGCGTCTGGGTTCGCGCCCGTCGTGACGGGGACGGCACACTGGTCGAGGTCGCCGCGCTCGACCGGTC
CGGCGGTGGCGACGTCGCCGTCGTCGTCGCCCAGCTCGTGACCGACCTGCAACAACCCGACCGGGAGGACAACTCGTGA

Upstream 100 bases:

>100_bases
TCGGAGACCGCGCTATGACCACCCCACGGCACCGCGCGCCTTCCCCCGCTCCGCTCCTCCAGCGCCCGGTTCCGCGGGGA
TCCCGGGTGAGGGCCGCACG

Downstream 100 bases:

>100_bases
CCGACGTGCAGTGGGAGAGCCTGAGCAACTGGGCGGTGGCCGCCAGCGGGGTCGTGTACTTCCTCGCGCTGCTGGTGCAC
CTCGCCGAGTGGGCGTCCTT

Product: ResB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MSTPTRTSLSTRPPEDDRRPGELTLRELLRWTWRQLTSMRTALVLLLLLALAAVPGSIIPQEGVDSLKTSNWRSDHPKLT
PVYERLGLFSVYDSPWFSAIYLLLMVSLVGCIIPRAILYWRGMWAQPPAAPRNLTRLPDHATYQTAVAPDAVLERARATL
RRRRYRLSPEAGDAVAAERGYLREAGNLLFHLAVVVVLVGFALGGLFGYKGGVILLVGDGYGFSNNLTQYDDFDPGSLFR
DSDMEPFSFSIDDFSVEWLTSGPRAGMARGFESHLTYRESPDAPDRTYDLKVNHPLSIGNTDVFLIGHGYAPVLTIRDGD
GEEVYSGPTIFLPTDQSFQSIGVVKAPDAEPTQIGLEGEFYPTVAFSKQTGSYFSLFGRPLDPLVSMLVYTGDLGMDDGQ
PQSVYSLDKSRTTMLTKANGAPYRIDLRPGEQVTLPDGLGTVSFDGLERWNKIQISQTPGKWIALIGVVLALLGLLGSLF
IRPRRVWVRARRDGDGTLVEVAALDRSGGGDVAVVVAQLVTDLQQPDREDNS

Sequences:

>Translated_532_residues
MSTPTRTSLSTRPPEDDRRPGELTLRELLRWTWRQLTSMRTALVLLLLLALAAVPGSIIPQEGVDSLKTSNWRSDHPKLT
PVYERLGLFSVYDSPWFSAIYLLLMVSLVGCIIPRAILYWRGMWAQPPAAPRNLTRLPDHATYQTAVAPDAVLERARATL
RRRRYRLSPEAGDAVAAERGYLREAGNLLFHLAVVVVLVGFALGGLFGYKGGVILLVGDGYGFSNNLTQYDDFDPGSLFR
DSDMEPFSFSIDDFSVEWLTSGPRAGMARGFESHLTYRESPDAPDRTYDLKVNHPLSIGNTDVFLIGHGYAPVLTIRDGD
GEEVYSGPTIFLPTDQSFQSIGVVKAPDAEPTQIGLEGEFYPTVAFSKQTGSYFSLFGRPLDPLVSMLVYTGDLGMDDGQ
PQSVYSLDKSRTTMLTKANGAPYRIDLRPGEQVTLPDGLGTVSFDGLERWNKIQISQTPGKWIALIGVVLALLGLLGSLF
IRPRRVWVRARRDGDGTLVEVAALDRSGGGDVAVVVAQLVTDLQQPDREDNS
>Mature_531_residues
STPTRTSLSTRPPEDDRRPGELTLRELLRWTWRQLTSMRTALVLLLLLALAAVPGSIIPQEGVDSLKTSNWRSDHPKLTP
VYERLGLFSVYDSPWFSAIYLLLMVSLVGCIIPRAILYWRGMWAQPPAAPRNLTRLPDHATYQTAVAPDAVLERARATLR
RRRYRLSPEAGDAVAAERGYLREAGNLLFHLAVVVVLVGFALGGLFGYKGGVILLVGDGYGFSNNLTQYDDFDPGSLFRD
SDMEPFSFSIDDFSVEWLTSGPRAGMARGFESHLTYRESPDAPDRTYDLKVNHPLSIGNTDVFLIGHGYAPVLTIRDGDG
EEVYSGPTIFLPTDQSFQSIGVVKAPDAEPTQIGLEGEFYPTVAFSKQTGSYFSLFGRPLDPLVSMLVYTGDLGMDDGQP
QSVYSLDKSRTTMLTKANGAPYRIDLRPGEQVTLPDGLGTVSFDGLERWNKIQISQTPGKWIALIGVVLALLGLLGSLFI
RPRRVWVRARRDGDGTLVEVAALDRSGGGDVAVVVAQLVTDLQQPDREDNS

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 58584; Mature: 58453

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPTRTSLSTRPPEDDRRPGELTLRELLRWTWRQLTSMRTALVLLLLLALAAVPGSIIP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QEGVDSLKTSNWRSDHPKLTPVYERLGLFSVYDSPWFSAIYLLLMVSLVGCIIPRAILYW
CCCHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RGMWAQPPAAPRNLTRLPDHATYQTAVAPDAVLERARATLRRRRYRLSPEAGDAVAAERG
CCCCCCCCCCCCCCCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YLREAGNLLFHLAVVVVLVGFALGGLFGYKGGVILLVGDGYGFSNNLTQYDDFDPGSLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
DSDMEPFSFSIDDFSVEWLTSGPRAGMARGFESHLTYRESPDAPDRTYDLKVNHPLSIGN
CCCCCCCEEECCCEEEEEECCCCCHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
TDVFLIGHGYAPVLTIRDGDGEEVYSGPTIFLPTDQSFQSIGVVKAPDAEPTQIGLEGEF
CEEEEEECCCCEEEEEECCCCCEEECCCEEEECCCCCHHHCCCEECCCCCCCEECCCCCE
YPTVAFSKQTGSYFSLFGRPLDPLVSMLVYTGDLGMDDGQPQSVYSLDKSRTTMLTKANG
EEEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEECCC
APYRIDLRPGEQVTLPDGLGTVSFDGLERWNKIQISQTPGKWIALIGVVLALLGLLGSLF
CCEEEECCCCCEEECCCCCCCCEEHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
IRPRRVWVRARRDGDGTLVEVAALDRSGGGDVAVVVAQLVTDLQQPDREDNS
HCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STPTRTSLSTRPPEDDRRPGELTLRELLRWTWRQLTSMRTALVLLLLLALAAVPGSIIP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QEGVDSLKTSNWRSDHPKLTPVYERLGLFSVYDSPWFSAIYLLLMVSLVGCIIPRAILYW
CCCHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RGMWAQPPAAPRNLTRLPDHATYQTAVAPDAVLERARATLRRRRYRLSPEAGDAVAAERG
CCCCCCCCCCCCCCCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YLREAGNLLFHLAVVVVLVGFALGGLFGYKGGVILLVGDGYGFSNNLTQYDDFDPGSLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
DSDMEPFSFSIDDFSVEWLTSGPRAGMARGFESHLTYRESPDAPDRTYDLKVNHPLSIGN
CCCCCCCEEECCCEEEEEECCCCCHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
TDVFLIGHGYAPVLTIRDGDGEEVYSGPTIFLPTDQSFQSIGVVKAPDAEPTQIGLEGEF
CEEEEEECCCCEEEEEECCCCCEEECCCEEEECCCCCHHHCCCEECCCCCCCEECCCCCE
YPTVAFSKQTGSYFSLFGRPLDPLVSMLVYTGDLGMDDGQPQSVYSLDKSRTTMLTKANG
EEEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEECCC
APYRIDLRPGEQVTLPDGLGTVSFDGLERWNKIQISQTPGKWIALIGVVLALLGLLGSLF
CCEEEECCCCCEEECCCCCCCCEEHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
IRPRRVWVRARRDGDGTLVEVAALDRSGGGDVAVVVAQLVTDLQQPDREDNS
HCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA