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The map label for this gene is ccsA [H]

Identifier: 119714768

GI number: 119714768

Start: 535397

End: 536422

Strand: Direct

Name: ccsA [H]

Synonym: Noca_0504

Alternate gene names: 119714768

Gene position: 535397-536422 (Clockwise)

Preceding gene: 119714767

Following gene: 119714770

Centisome position: 10.74

GC content: 71.05

Gene sequence:

>1026_bases
GTGACCGACGTGCAGTGGGAGAGCCTGAGCAACTGGGCGGTGGCCGCCAGCGGGGTCGTGTACTTCCTCGCGCTGCTGGT
GCACCTCGCCGAGTGGGCGTCCTTGCGCAAGGTCCCGGTCGCGGCCGGTGCCGCGGTGACGTCCTCGGTGGACATCCCGG
GTGGGATCGCCGTGGCCACCGGTCCCGGCGGCGAGGGCGACGGCCAGGACGAGGGGAAGGTGCGGCGCACCGAGTTCCTC
GGCCGCCTGGGCTACCTGCTCACCGTCCTCGCGGTGGCCGTCCAGCTCGTGGCGCTCGTGGGGCGCGGCATGGCCGCCGA
CCCGGACCGGGTGCCGTGGGGCAACATGTACGAGTTCACCCTCACGGGGACCTTCGTGGTCGCCGCGCTGTACGTCGCGC
TCTACCACAAGCTGCGGCTCGCCTGGATGGCGCCGATCGTGGTCGCTTTCGTGCTCAGCGTGCTGATGGTCGCGGTGATC
TGGCTCTACGCCCCCGTCGCCCCGCTGACCGAGGCGCTCTCGTCGTACTGGCTGGTGATCCACGTGGTCTCCGCGATCAT
CGCCACCGGCGCGTTCACCCTCGGCGGGATCACCTCCGCGCTGTACCTCGTGAAGGCGCGCGCGCCGGAGCGAGAGTCCG
GGTACGTCGCGCGGCTGCCGCGGCCCGAGGTGCTCGACCGGGTCTCCTACCGGCTGCACGCGTTCGGCTTCCCGGTGTGG
ACGTTCGCGGTGCTGATCACCGGCCCGATCTGGGCGCACCAGGCCTGGTCGTCGTACTGGAACTGGGACCCCAAGGAGGT
CTGGGCGTTCATCACCTGGGTCGTCTACGCGGCGTACCTCCACGCGCGCACCACCGCCGGCTGGAAGGGCCGCAACGCCG
CGATCCTCGCCCTGGTCGGCGTCGCCACGCTGTGGTTCAACTTCATCGGCATCAACTACTTCTCGACCACCAGCCAGCAC
TCCTACGCCGGCGGCGCACCCGCGCTGGTCGAGCCGGCCGCTCCCCAATCCGACGCACTCGGGTAG

Upstream 100 bases:

>100_bases
TCGAGGTCGCCGCGCTCGACCGGTCCGGCGGTGGCGACGTCGCCGTCGTCGTCGCCCAGCTCGTGACCGACCTGCAACAA
CCCGACCGGGAGGACAACTC

Downstream 100 bases:

>100_bases
CCGCGGAGTCGGTCCCGGCCGGCCTTCGAGCGGACCGTGGCCGGCCCTTCGAGCGGACCGTGGCCGGCCCTTCGAGCGGA
CCGTGGCCGGCCTTCGAGCG

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTDVQWESLSNWAVAASGVVYFLALLVHLAEWASLRKVPVAAGAAVTSSVDIPGGIAVATGPGGEGDGQDEGKVRRTEFL
GRLGYLLTVLAVAVQLVALVGRGMAADPDRVPWGNMYEFTLTGTFVVAALYVALYHKLRLAWMAPIVVAFVLSVLMVAVI
WLYAPVAPLTEALSSYWLVIHVVSAIIATGAFTLGGITSALYLVKARAPERESGYVARLPRPEVLDRVSYRLHAFGFPVW
TFAVLITGPIWAHQAWSSYWNWDPKEVWAFITWVVYAAYLHARTTAGWKGRNAAILALVGVATLWFNFIGINYFSTTSQH
SYAGGAPALVEPAAPQSDALG

Sequences:

>Translated_341_residues
MTDVQWESLSNWAVAASGVVYFLALLVHLAEWASLRKVPVAAGAAVTSSVDIPGGIAVATGPGGEGDGQDEGKVRRTEFL
GRLGYLLTVLAVAVQLVALVGRGMAADPDRVPWGNMYEFTLTGTFVVAALYVALYHKLRLAWMAPIVVAFVLSVLMVAVI
WLYAPVAPLTEALSSYWLVIHVVSAIIATGAFTLGGITSALYLVKARAPERESGYVARLPRPEVLDRVSYRLHAFGFPVW
TFAVLITGPIWAHQAWSSYWNWDPKEVWAFITWVVYAAYLHARTTAGWKGRNAAILALVGVATLWFNFIGINYFSTTSQH
SYAGGAPALVEPAAPQSDALG
>Mature_340_residues
TDVQWESLSNWAVAASGVVYFLALLVHLAEWASLRKVPVAAGAAVTSSVDIPGGIAVATGPGGEGDGQDEGKVRRTEFLG
RLGYLLTVLAVAVQLVALVGRGMAADPDRVPWGNMYEFTLTGTFVVAALYVALYHKLRLAWMAPIVVAFVLSVLMVAVIW
LYAPVAPLTEALSSYWLVIHVVSAIIATGAFTLGGITSALYLVKARAPERESGYVARLPRPEVLDRVSYRLHAFGFPVWT
FAVLITGPIWAHQAWSSYWNWDPKEVWAFITWVVYAAYLHARTTAGWKGRNAAILALVGVATLWFNFIGINYFSTTSQHS
YAGGAPALVEPAAPQSDALG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 36809; Mature: 36678

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVQWESLSNWAVAASGVVYFLALLVHLAEWASLRKVPVAAGAAVTSSVDIPGGIAVAT
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEE
GPGGEGDGQDEGKVRRTEFLGRLGYLLTVLAVAVQLVALVGRGMAADPDRVPWGNMYEFT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
LTGTFVVAALYVALYHKLRLAWMAPIVVAFVLSVLMVAVIWLYAPVAPLTEALSSYWLVI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HVVSAIIATGAFTLGGITSALYLVKARAPERESGYVARLPRPEVLDRVSYRLHAFGFPVW
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHH
TFAVLITGPIWAHQAWSSYWNWDPKEVWAFITWVVYAAYLHARTTAGWKGRNAAILALVG
HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VATLWFNFIGINYFSTTSQHSYAGGAPALVEPAAPQSDALG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDVQWESLSNWAVAASGVVYFLALLVHLAEWASLRKVPVAAGAAVTSSVDIPGGIAVAT
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEE
GPGGEGDGQDEGKVRRTEFLGRLGYLLTVLAVAVQLVALVGRGMAADPDRVPWGNMYEFT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
LTGTFVVAALYVALYHKLRLAWMAPIVVAFVLSVLMVAVIWLYAPVAPLTEALSSYWLVI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HVVSAIIATGAFTLGGITSALYLVKARAPERESGYVARLPRPEVLDRVSYRLHAFGFPVW
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHH
TFAVLITGPIWAHQAWSSYWNWDPKEVWAFITWVVYAAYLHARTTAGWKGRNAAILALVG
HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VATLWFNFIGINYFSTTSQHSYAGGAPALVEPAAPQSDALG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA