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The map label for this gene is lsrF [H]

Identifier: 119714664

GI number: 119714664

Start: 429287

End: 430168

Strand: Reverse

Name: lsrF [H]

Synonym: Noca_0399

Alternate gene names: 119714664

Gene position: 430168-429287 (Counterclockwise)

Preceding gene: 119714665

Following gene: 119714663

Centisome position: 8.63

GC content: 69.05

Gene sequence:

>882_bases
ATGGCTGACCTCGAGGGCAACCTCGCCGCCAAGGACTTCGGCCTCGACCGCCCCCAGCAGGTGGAGGGATTCCACATCAA
GGGCGCCAGCCAGCTCGACTTCGGCATGCGCCACCGCCTCTCGCGCATCTTCGGCGCCGACGGACGCACCGTCATGCTCG
CCTTCGACCACGGGTACTTCCAAGGTCCCACCAGCGGGCTCGAGCGTGTCGACCTGAACATCGTGCCGCTCGCGCCGTAC
GCGGACGCGCTCATGGCCACGCGAGGCATCATCCGCTCGGTCATCCCGGCCAGCTGCGACAACGCTCTCGTCGTCCGGGC
GTCCGGCGGCCCCTCCATCCTCAACGACCTGTCCGACGAGCGCATCGCGATGGACATCACCGACGCCGTGCGCATGGATG
CCGCGGCCGTGGCGGTCCAGGTGTTCATCGGCAGCGACCACGAGACCCAATCCATCCACAACCTGACCCAGCTCGTCGAC
GCTGGGCTGGGGGCGGGCGTCCCCGTCCTCGGCGTGACCGCGGTCGGCCGGGACATGGTGCGAGACGCGCGCTACCTCGG
CCTCGCCACCCGGATCATCGCGGAGCTCGGCGCCCAGCTCGTCAAGACGTACTACTGCGAGGACTTCGCACAGGTCACCG
CTGCGTGCCCGGTACCGATCATCATGGCCGGTGGCAAGAAGCTGCCCGTGCTCGACGCCTTGAACATGGCGCGCAAGGCG
GTCGACGAAGGCGCGGCCGGGGTGGACATGGGTCGCAACATCTTCCAGCGTCGAGACCCCCACGCCATGCTCCAGGCCGT
GCGCTCCGTCGTCCACGACGAGTGGTCGCCCGAGAAGGCGGCCGAGCTCTACCGTGACCTCTCCCACGGCGCGGAGGACT
GA

Upstream 100 bases:

>100_bases
GGCGACACCGTGAACCTGCCCTGGACACCGGGGCAACCGGCTCCGCACGTGCCGGAGACGCCAGCACTCTGACAACGAAA
GCCAACGAAAGGACTCAACC

Downstream 100 bases:

>100_bases
TCCGAGGTGCACGTGTCCGAGGCCGACGCCCGCGCGGCCGTCTGCGAGGTGGGACGGCGGCTCTGGCAGCGCGGGATGGT
TGCCGCCAACGACGGCAACA

Product: aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MADLEGNLAAKDFGLDRPQQVEGFHIKGASQLDFGMRHRLSRIFGADGRTVMLAFDHGYFQGPTSGLERVDLNIVPLAPY
ADALMATRGIIRSVIPASCDNALVVRASGGPSILNDLSDERIAMDITDAVRMDAAAVAVQVFIGSDHETQSIHNLTQLVD
AGLGAGVPVLGVTAVGRDMVRDARYLGLATRIIAELGAQLVKTYYCEDFAQVTAACPVPIIMAGGKKLPVLDALNMARKA
VDEGAAGVDMGRNIFQRRDPHAMLQAVRSVVHDEWSPEKAAELYRDLSHGAED

Sequences:

>Translated_293_residues
MADLEGNLAAKDFGLDRPQQVEGFHIKGASQLDFGMRHRLSRIFGADGRTVMLAFDHGYFQGPTSGLERVDLNIVPLAPY
ADALMATRGIIRSVIPASCDNALVVRASGGPSILNDLSDERIAMDITDAVRMDAAAVAVQVFIGSDHETQSIHNLTQLVD
AGLGAGVPVLGVTAVGRDMVRDARYLGLATRIIAELGAQLVKTYYCEDFAQVTAACPVPIIMAGGKKLPVLDALNMARKA
VDEGAAGVDMGRNIFQRRDPHAMLQAVRSVVHDEWSPEKAAELYRDLSHGAED
>Mature_292_residues
ADLEGNLAAKDFGLDRPQQVEGFHIKGASQLDFGMRHRLSRIFGADGRTVMLAFDHGYFQGPTSGLERVDLNIVPLAPYA
DALMATRGIIRSVIPASCDNALVVRASGGPSILNDLSDERIAMDITDAVRMDAAAVAVQVFIGSDHETQSIHNLTQLVDA
GLGAGVPVLGVTAVGRDMVRDARYLGLATRIIAELGAQLVKTYYCEDFAQVTAACPVPIIMAGGKKLPVLDALNMARKAV
DEGAAGVDMGRNIFQRRDPHAMLQAVRSVVHDEWSPEKAAELYRDLSHGAED

Specific function: Could be involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle [H]

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1787796, Length=286, Percent_Identity=58.041958041958, Blast_Score=341, Evalue=4e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: 4.2.1.- [C]

Molecular weight: Translated: 31420; Mature: 31289

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLEGNLAAKDFGLDRPQQVEGFHIKGASQLDFGMRHRLSRIFGADGRTVMLAFDHGYF
CCCCCCCCCHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
QGPTSGLERVDLNIVPLAPYADALMATRGIIRSVIPASCDNALVVRASGGPSILNDLSDE
CCCCCCHHEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCC
RIAMDITDAVRMDAAAVAVQVFIGSDHETQSIHNLTQLVDAGLGAGVPVLGVTAVGRDMV
CEEEEHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RDARYLGLATRIIAELGAQLVKTYYCEDFAQVTAACPVPIIMAGGKKLPVLDALNMARKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
VDEGAAGVDMGRNIFQRRDPHAMLQAVRSVVHDEWSPEKAAELYRDLSHGAED
HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADLEGNLAAKDFGLDRPQQVEGFHIKGASQLDFGMRHRLSRIFGADGRTVMLAFDHGYF
CCCCCCCCHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
QGPTSGLERVDLNIVPLAPYADALMATRGIIRSVIPASCDNALVVRASGGPSILNDLSDE
CCCCCCHHEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCC
RIAMDITDAVRMDAAAVAVQVFIGSDHETQSIHNLTQLVDAGLGAGVPVLGVTAVGRDMV
CEEEEHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RDARYLGLATRIIAELGAQLVKTYYCEDFAQVTAACPVPIIMAGGKKLPVLDALNMARKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
VDEGAAGVDMGRNIFQRRDPHAMLQAVRSVVHDEWSPEKAAELYRDLSHGAED
HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA