| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714665
Identifier: 119714665
GI number: 119714665
Start: 430197
End: 430586
Strand: Reverse
Name: 119714665
Synonym: Noca_0400
Alternate gene names: NA
Gene position: 430586-430197 (Counterclockwise)
Preceding gene: 119714666
Following gene: 119714664
Centisome position: 8.64
GC content: 66.92
Gene sequence:
>390_bases ATGAAATCCGGATCCACCAACGATCTCGAGTACCGCTTCGGCGACCACGGGCCGGCCTACGTCATCCGGGACCCGTCCAG CGAGATCGGAGTCCTGCGGCTGCGGCCCGGCGACGACATGACCAACCACATCCATCACTTCTGCGACGAGTCGTTCATCG TGCTGGAGGGGTCCGCGACGCTGTGGGTCGGCTGCGAGCGGCGCTACCTCCTCGGTGTCGGCGACGTGTACCGCTGCTCC CCCGGCGAGATGCACTACTTCGTCAACGAGACCGACGCGCCGTTCCGCATGGTCTTCGTCAAGTCGCCGGCCAGTCCCGG CGACACCGTGAACCTGCCCTGGACACCGGGGCAACCGGCTCCGCACGTGCCGGAGACGCCAGCACTCTGA
Upstream 100 bases:
>100_bases GCCTTCGCCGCCACGACCGGCGCCCAGATTCCCATCGACGGCGGCAACGAGCGGGTCATCTGAACCGGCCACCGCCCACC GCACACATGAGCGAGGACAC
Downstream 100 bases:
>100_bases CAACGAAAGCCAACGAAAGGACTCAACCATGGCTGACCTCGAGGGCAACCTCGCCGCCAAGGACTTCGGCCTCGACCGCC CCCAGCAGGTGGAGGGATTC
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Mannose-6-Phosphate Isomerase; Polyketide Synthase CurC; Cupin Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKSGSTNDLEYRFGDHGPAYVIRDPSSEIGVLRLRPGDDMTNHIHHFCDESFIVLEGSATLWVGCERRYLLGVGDVYRCS PGEMHYFVNETDAPFRMVFVKSPASPGDTVNLPWTPGQPAPHVPETPAL
Sequences:
>Translated_129_residues MKSGSTNDLEYRFGDHGPAYVIRDPSSEIGVLRLRPGDDMTNHIHHFCDESFIVLEGSATLWVGCERRYLLGVGDVYRCS PGEMHYFVNETDAPFRMVFVKSPASPGDTVNLPWTPGQPAPHVPETPAL >Mature_129_residues MKSGSTNDLEYRFGDHGPAYVIRDPSSEIGVLRLRPGDDMTNHIHHFCDESFIVLEGSATLWVGCERRYLLGVGDVYRCS PGEMHYFVNETDAPFRMVFVKSPASPGDTVNLPWTPGQPAPHVPETPAL
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14332; Mature: 14332
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSGSTNDLEYRFGDHGPAYVIRDPSSEIGVLRLRPGDDMTNHIHHFCDESFIVLEGSAT CCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCE LWVGCERRYLLGVGDVYRCSPGEMHYFVNETDAPFRMVFVKSPASPGDTVNLPWTPGQPA EEEECCCEEEEECCCEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCCCCC PHVPETPAL CCCCCCCCC >Mature Secondary Structure MKSGSTNDLEYRFGDHGPAYVIRDPSSEIGVLRLRPGDDMTNHIHHFCDESFIVLEGSAT CCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCE LWVGCERRYLLGVGDVYRCSPGEMHYFVNETDAPFRMVFVKSPASPGDTVNLPWTPGQPA EEEECCCEEEEECCCEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCCCCC PHVPETPAL CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA