| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is narK [H]
Identifier: 119714615
GI number: 119714615
Start: 371696
End: 373204
Strand: Direct
Name: narK [H]
Synonym: Noca_0349
Alternate gene names: 119714615
Gene position: 371696-373204 (Clockwise)
Preceding gene: 119714609
Following gene: 119714616
Centisome position: 7.45
GC content: 69.45
Gene sequence:
>1509_bases ATGGCCCTCACTTCCTTGCACACCGACGCCGCCGAGGCGTCCCCCATCCGCCGCCGGACCGGCCGCTGGATCGACGACTG GCGCCCGGAGGACCCGGACTTCTGGGCGAACGGCGGCCAGCAGGTCGCCCGTCGCAACCTGGTCTGGTCGGTCTTCGCCG AGCACCTCGGATTCTCCGTGTGGCTGATCTGGAGCGTCAGCTCGGCGTTCCTGCTCGCCCAGGGCTTCACGTTCACCCCG CAGCAGCTGTTCCTCCTCGTCGCGATTCCCAACCTGGTCGGCTCGCTGCTGCGCGTCCCCTACACCCTCGCCGTGCCGCG GTTCGGCGGCCGCAACTGGACCATGGTGAGCGCCGGCCTGCTGCTGGTCCCGACGCTCGGCTTCGCCTACGCGGTGACCG ATCCGAGCACGCCGTACTGGGTCTTCTGCCTGATCGCGGCGTCCGCCGGCTTCGGCGGCGGGAACTTCGCGAGCTCGATG GCGAACATCAACTTCTTCTACCCGACCGCCAAGAAGGGGGCCGCCCTCGGCCTCAACGCCGCCGGCGGGAACCTCGGCGT CTCGCTGATCCAGTTCTTCCTGCCGCTGATCGTCGGTGGCGCGGCGATCTTCGGCCTGGCCAAGGCCAGCCCCGGCGGCA TCCACCTCGAGCGGGCCGCCTGGGTGTACGCCGGTCTCGCGATCGTGGCCACGGCGGCGGCCTACTTCTTCATGGACAAC CTCGGGACCGCCAGGTCCTCGGCCAGGGAGCAGCTCGGCGTCCTCAAACACAAGCAGACCTGGGTGATGTCGTTCCTCTA CATCGGCACGTTCGGCTCGTTCATCGGCTACTCCGCCGCGATGCCGCTGCTGATCAAGCTCAACTTCTGGGTGCCCGAGC CGGCCCCGCTCGGCACCGGCATCTACTTCGCCTACTTCGCCTTCCTCGGCGCGCTGGTCGGCTCGATCACCCGCCCGCTC GGTGGCTGGCTGGCCGACAGGTACGGCGGCGCCAGGGTCACCCTCGGCGCCTTCACCGGGATCATCCTCAGCACCCTCGG CGTGCTGTGGACGCTGCTGCAGCTGACCCCGAACCCTGCCGCGGACCCGGCGATCGCCGCCGACAACAAGTCCTGGTTCC CGTACTTCCTCGGGTTCTTCCTGCTCGTCTTCGCTGCCACCGGCATCGGCAACGGCTCGACGTACAAGATGATCCCCGCG ATCTTCCGGACCGAGGCCGAGCGGGCGACCGCCGTGGGCACCGAGGAGCGCACCGCCGCGCTCCTCGCCGCCACCAAGCG GGCCTCGGCCGCGATCGGCATCATCGGCGCGGTCGGCGCCATCGGCGGGTTTCTGATCCCGATCACGTTCAGCTCGCCGT GGGTGAGCGACCCGATGGAGGCCACCAAGACCGCGTTCGTCATCTTCACGGTCTTCTACCTGGCCTGCGCGGCCACCACC TGGGTGGTCTACCTGCGCAGGCCCGCCGAGCACAAGGCGCACCTCAGCTACGCCGGCGCCGGGATCTGA
Upstream 100 bases:
>100_bases CCGTTGGCGGGGGGCGCGGTGTGAGGTCGTGAGGACAAGTTGACCTTGCCGGTACGGCGGCCTGGGCGACGCGAAACCTG CGCTGCCGAGACTGACCGGC
Downstream 100 bases:
>100_bases TGACCCAGACCCACTGCCCCTACTGCTCGCTCCAGTGCGGCATGCGCCTCGAGGGTGGCCGCCGGCTGGAGGTGCGGCCG TGGCCGGAGTTCCCCGTCAA
Product: major facilitator transporter
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MALTSLHTDAAEASPIRRRTGRWIDDWRPEDPDFWANGGQQVARRNLVWSVFAEHLGFSVWLIWSVSSAFLLAQGFTFTP QQLFLLVAIPNLVGSLLRVPYTLAVPRFGGRNWTMVSAGLLLVPTLGFAYAVTDPSTPYWVFCLIAASAGFGGGNFASSM ANINFFYPTAKKGAALGLNAAGGNLGVSLIQFFLPLIVGGAAIFGLAKASPGGIHLERAAWVYAGLAIVATAAAYFFMDN LGTARSSAREQLGVLKHKQTWVMSFLYIGTFGSFIGYSAAMPLLIKLNFWVPEPAPLGTGIYFAYFAFLGALVGSITRPL GGWLADRYGGARVTLGAFTGIILSTLGVLWTLLQLTPNPAADPAIAADNKSWFPYFLGFFLLVFAATGIGNGSTYKMIPA IFRTEAERATAVGTEERTAALLAATKRASAAIGIIGAVGAIGGFLIPITFSSPWVSDPMEATKTAFVIFTVFYLACAATT WVVYLRRPAEHKAHLSYAGAGI
Sequences:
>Translated_502_residues MALTSLHTDAAEASPIRRRTGRWIDDWRPEDPDFWANGGQQVARRNLVWSVFAEHLGFSVWLIWSVSSAFLLAQGFTFTP QQLFLLVAIPNLVGSLLRVPYTLAVPRFGGRNWTMVSAGLLLVPTLGFAYAVTDPSTPYWVFCLIAASAGFGGGNFASSM ANINFFYPTAKKGAALGLNAAGGNLGVSLIQFFLPLIVGGAAIFGLAKASPGGIHLERAAWVYAGLAIVATAAAYFFMDN LGTARSSAREQLGVLKHKQTWVMSFLYIGTFGSFIGYSAAMPLLIKLNFWVPEPAPLGTGIYFAYFAFLGALVGSITRPL GGWLADRYGGARVTLGAFTGIILSTLGVLWTLLQLTPNPAADPAIAADNKSWFPYFLGFFLLVFAATGIGNGSTYKMIPA IFRTEAERATAVGTEERTAALLAATKRASAAIGIIGAVGAIGGFLIPITFSSPWVSDPMEATKTAFVIFTVFYLACAATT WVVYLRRPAEHKAHLSYAGAGI >Mature_501_residues ALTSLHTDAAEASPIRRRTGRWIDDWRPEDPDFWANGGQQVARRNLVWSVFAEHLGFSVWLIWSVSSAFLLAQGFTFTPQ QLFLLVAIPNLVGSLLRVPYTLAVPRFGGRNWTMVSAGLLLVPTLGFAYAVTDPSTPYWVFCLIAASAGFGGGNFASSMA NINFFYPTAKKGAALGLNAAGGNLGVSLIQFFLPLIVGGAAIFGLAKASPGGIHLERAAWVYAGLAIVATAAAYFFMDNL GTARSSAREQLGVLKHKQTWVMSFLYIGTFGSFIGYSAAMPLLIKLNFWVPEPAPLGTGIYFAYFAFLGALVGSITRPLG GWLADRYGGARVTLGAFTGIILSTLGVLWTLLQLTPNPAADPAIAADNKSWFPYFLGFFLLVFAATGIGNGSTYKMIPAI FRTEAERATAVGTEERTAALLAATKRASAAIGIIGAVGAIGGFLIPITFSSPWVSDPMEATKTAFVIFTVFYLACAATTW VVYLRRPAEHKAHLSYAGAGI
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=493, Percent_Identity=43.2048681541582, Blast_Score=323, Evalue=2e-89, Organism=Escherichia coli, GI1787743, Length=485, Percent_Identity=40.2061855670103, Blast_Score=293, Evalue=2e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53609; Mature: 53477
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTSLHTDAAEASPIRRRTGRWIDDWRPEDPDFWANGGQQVARRNLVWSVFAEHLGFSV CCCCCCCCCCHHCCHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCEE WLIWSVSSAFLLAQGFTFTPQQLFLLVAIPNLVGSLLRVPYTLAVPRFGGRNWTMVSAGL EEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCH LLVPTLGFAYAVTDPSTPYWVFCLIAASAGFGGGNFASSMANINFFYPTAKKGAALGLNA HHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCEEEEEC AGGNLGVSLIQFFLPLIVGGAAIFGLAKASPGGIHLERAAWVYAGLAIVATAAAYFFMDN CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC LGTARSSAREQLGVLKHKQTWVMSFLYIGTFGSFIGYSAAMPLLIKLNFWVPEPAPLGTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCH IYFAYFAFLGALVGSITRPLGGWLADRYGGARVTLGAFTGIILSTLGVLWTLLQLTPNPA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC ADPAIAADNKSWFPYFLGFFLLVFAATGIGNGSTYKMIPAIFRTEAERATAVGTEERTAA CCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LLAATKRASAAIGIIGAVGAIGGFLIPITFSSPWVSDPMEATKTAFVIFTVFYLACAATT HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH WVVYLRRPAEHKAHLSYAGAGI HHHHHCCCCCHHHHCCCCCCCC >Mature Secondary Structure ALTSLHTDAAEASPIRRRTGRWIDDWRPEDPDFWANGGQQVARRNLVWSVFAEHLGFSV CCCCCCCCCHHCCHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCEE WLIWSVSSAFLLAQGFTFTPQQLFLLVAIPNLVGSLLRVPYTLAVPRFGGRNWTMVSAGL EEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCH LLVPTLGFAYAVTDPSTPYWVFCLIAASAGFGGGNFASSMANINFFYPTAKKGAALGLNA HHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCEEEEEC AGGNLGVSLIQFFLPLIVGGAAIFGLAKASPGGIHLERAAWVYAGLAIVATAAAYFFMDN CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC LGTARSSAREQLGVLKHKQTWVMSFLYIGTFGSFIGYSAAMPLLIKLNFWVPEPAPLGTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCH IYFAYFAFLGALVGSITRPLGGWLADRYGGARVTLGAFTGIILSTLGVLWTLLQLTPNPA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC ADPAIAADNKSWFPYFLGFFLLVFAATGIGNGSTYKMIPAIFRTEAERATAVGTEERTAA CCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LLAATKRASAAIGIIGAVGAIGGFLIPITFSSPWVSDPMEATKTAFVIFTVFYLACAATT HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH WVVYLRRPAEHKAHLSYAGAGI HHHHHCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]