Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714609

Identifier: 119714609

GI number: 119714609

Start: 364136

End: 365311

Strand: Direct

Name: 119714609

Synonym: Noca_0343

Alternate gene names: NA

Gene position: 364136-365311 (Clockwise)

Preceding gene: 119714608

Following gene: 119714615

Centisome position: 7.3

GC content: 72.36

Gene sequence:

>1176_bases
GTGAACCTGCTCGACTGGCTCCTGGTCGTGCTCGTGCTCGCCTACGCGCTCTCCGGCTACTGGCAGGGCTTCATCACCGG
TGCCTTCGCGACCGGGGGGCTGCTGCTCGGCGGACTGTTCGGCGTGTGGCTGGCCCCGGTCGCACTGGGTGACGCCAACC
CCTCCCTGATGGTCTCCCTGGGCGCGCTGTTCATCGTGATCCTGTCCGCGTCGCTGGGGCAGGCCGTGCTCCAGTTCGCC
GGCGCCCGGATCCGCGAGCGGATCACCTGGCAGCCGGCCCGCGCCCTCGACGCGGTCGGCGGCGCCATGCTCAGCGCCGT
GGCGGTCCTCGTGGTCGCCTGGGCGCTCGGCGTCGCGATCTCGGGGTCTCGGATCGGCGGCGTCACCCCGCTGGTGCGGG
GCTCGACCGTGCTCTCCCACGTCGACGAGGTGATGCCCGCCAGCGCCGACGGCGCGCTGCAGGCGTTCAACGACGTCGTC
GGCACCAGCTTCTTTCCCCGCTACCTCGAGCCGTTCGCGCCCGAGCGGATCGTCGAGGTCGGACCCGGCCCCAAGCGGCT
GCTCAACGACCCCGACGTCGAGCGCGCCGGGTCGAGCGTCCTCAAGATCCGCGGCACCAACGAGTGTGGCCGGGGTGTCG
AGGGGTCCGGGTTCCTGTACGCCGGCAACCGGCTGATGACCAACGCCCACGTCGTCGCCGGGATCGACGACCCCGAGGTC
ATCGTCGGCGACGAGTCGGTCCCGGCGGACGTCGTCTACTACAACCCCGACATCGACGTGGCGGTGCTCTCCTTCGACAG
CGGGGACCTGCCGGCTCTGCGCTTCGACCGCGACGCCGGCGCGCCCGACGGTGTCGCGATCCTGGGCTACCCGCAGGACG
GGCCCTACCACGTGGAGCCCGCCCGGATCCGCTCCGAGCAGCGGCTCCGCTCACCCAACATCTACGGCGACGGCGCGGTG
ATCCGTGAGGTCTACTCCCTGCGCGGGCGGATCCTGCCGGGCAACTCCGGCGGGCCGATCGTGTCCTCGGCCGGCGACGT
CGTCGGCGTGGTGTTCGCCGCCTCGGTCACCGACCACGAAACCGGCTACGCGCTGACCGCCGGACAGGTCTCCGCCGCCG
CGGCCGCCGGCCTGACCAGCTCGAGCCAGGTGTCGACCGGCGGTTGTGCTGGGTGA

Upstream 100 bases:

>100_bases
GCGACCTGCCGTCGTACATGCTGCAGGCTGACCCACGACGCGGTCGGCTCCTCGACATCGAGGACGACCAGGACGACGAC
CAGGACGAGGAGGAGGACGG

Downstream 100 bases:

>100_bases
GCGGAGCCGGGTCAGCGGCTGCGGACGGGGGGAACCGGCCTGCAAGTTTCATCGGCCGGCCGACAGAGCTCGTGGCTGGA
CGATGAAGCTTCATCGTCCA

Product: peptidase S1 and S6, chymotrypsin/Hap

Products: NA

Alternate protein names: Colicin V Production Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Membrane-Associated Serine Protease; Trypsin-Like Serine Protease; Protease; Peptidase; Serine Peptidase; Serine Proteinase; Trypsin-Like Serine Protease With C-Terminal PDZ Domain; S1C Family Peptidase

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSLGALFIVILSASLGQAVLQFA
GARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAISGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVV
GTSFFPRYLEPFAPERIVEVGPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV
IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEPARIRSEQRLRSPNIYGDGAV
IREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHETGYALTAGQVSAAAAAGLTSSSQVSTGGCAG

Sequences:

>Translated_391_residues
MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSLGALFIVILSASLGQAVLQFA
GARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAISGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVV
GTSFFPRYLEPFAPERIVEVGPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV
IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEPARIRSEQRLRSPNIYGDGAV
IREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHETGYALTAGQVSAAAAAGLTSSSQVSTGGCAG
>Mature_391_residues
MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSLGALFIVILSASLGQAVLQFA
GARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAISGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVV
GTSFFPRYLEPFAPERIVEVGPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV
IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEPARIRSEQRLRSPNIYGDGAV
IREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHETGYALTAGQVSAAAAAGLTSSSQVSTGGCAG

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40301; Mature: 40301

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GALFIVILSASLGQAVLQFAGARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
SGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVVGTSFFPRYLEPFAPERIVEV
CCCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCEEEC
GPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV
CCCHHHHCCCCCHHHCCCCEEEEECCCHHCCCCCCCCEEEECCEEEECCEEEEECCCCCE
IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEP
EECCCCCCCCEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCCEECCH
ARIRSEQRLRSPNIYGDGAVIREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHE
HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCC
TGYALTAGQVSAAAAAGLTSSSQVSTGGCAG
CCEEEECCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GALFIVILSASLGQAVLQFAGARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
SGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVVGTSFFPRYLEPFAPERIVEV
CCCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCEEEC
GPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV
CCCHHHHCCCCCHHHCCCCEEEEECCCHHCCCCCCCCEEEECCEEEECCEEEEECCCCCE
IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEP
EECCCCCCCCEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCCEECCH
ARIRSEQRLRSPNIYGDGAVIREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHE
HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCC
TGYALTAGQVSAAAAAGLTSSSQVSTGGCAG
CCEEEECCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA