| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714539
Identifier: 119714539
GI number: 119714539
Start: 294848
End: 295579
Strand: Direct
Name: 119714539
Synonym: Noca_0272
Alternate gene names: NA
Gene position: 294848-295579 (Clockwise)
Preceding gene: 119714538
Following gene: 119714540
Centisome position: 5.91
GC content: 73.22
Gene sequence:
>732_bases ATGACCACGAGCGAGATCGAGGTCCCGGCCGGGCCGCATGAGAGCGAGCCCCACATCCGGGGCTTCAACAACCGGCTGAA CTGGCTGCGCGCCGCGGTCCTCGGTGCCAACGACGGCATCGTCTCGACGGCCGGCATCGTGATCGGTGCCATCGGCGCGA CGAGCGACCGCAACGCGATCGTGATCGCGGGCGTCGCGGGGCTCGCCGCGGGCGCGATGAGCATGGCGGCCGGCGAGTAC GTCTCGGTCAGCACCCAGCGTGACTCCGAGCTCGCTCTGCTCGAGAAGGAGCGGCGCGAGCTGCTCGAGGAGCCTGAGGA GGAGCTGGCCGAGCTCGCCGGGCTGTACGCCGCGAAGGGCCTCCCGGACGACCTGGCGCTCGAGGTCGCGACCGTGCTGA CCGCCCAGGACGCGCTGGCCGCGCACGCGGAGGTCGAGCTCGGCATCGACCCGGACGACATCGCCAGCCCCCTGCACGCG GCCTGGGCCTCGATGCTCGCCTTCACGATCGGCGCGCTGCTGCCGCTGCTGTCGATCACCCTGGCGTCCGCCGAGACCCG CGTGCCGCTCACGGTCGGCGTCGTGGTGCTGGCCCTGGCGATCACCGGGTGGGCCAGCGCCCGCCTCGGGTACAGCAGCC CGGCGCGGGCCGTGGCCCGCAACGTCGCGGGCGGCCTGTTCGCGATGGCCGTCACCTTCGCCATCGGCTCGGCGCTCGGC ACCCAGATCTGA
Upstream 100 bases:
>100_bases GATCGGCCGCGACCTGGGGCTGTGAGGGCCGTCCGACCGACGAGTGAGCCGAGGCAACCCTTGCTTGCGAGGGCCTCGGG CGCAGCGTTGGATTGACGCC
Downstream 100 bases:
>100_bases CCGCGTCCGGCGTCTCGCCTTCGGCGCCCACGGGGCTGACCGTCCGACGGCGTGGCCGCGTCTGGCGCGTCGCCTTCGGC GCCACGCCGGCCGCGGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Ypothetical Protein SMU.; Nodulin-Related Transmembrane Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTTSEIEVPAGPHESEPHIRGFNNRLNWLRAAVLGANDGIVSTAGIVIGAIGATSDRNAIVIAGVAGLAAGAMSMAAGEY VSVSTQRDSELALLEKERRELLEEPEEELAELAGLYAAKGLPDDLALEVATVLTAQDALAAHAEVELGIDPDDIASPLHA AWASMLAFTIGALLPLLSITLASAETRVPLTVGVVVLALAITGWASARLGYSSPARAVARNVAGGLFAMAVTFAIGSALG TQI
Sequences:
>Translated_243_residues MTTSEIEVPAGPHESEPHIRGFNNRLNWLRAAVLGANDGIVSTAGIVIGAIGATSDRNAIVIAGVAGLAAGAMSMAAGEY VSVSTQRDSELALLEKERRELLEEPEEELAELAGLYAAKGLPDDLALEVATVLTAQDALAAHAEVELGIDPDDIASPLHA AWASMLAFTIGALLPLLSITLASAETRVPLTVGVVVLALAITGWASARLGYSSPARAVARNVAGGLFAMAVTFAIGSALG TQI >Mature_242_residues TTSEIEVPAGPHESEPHIRGFNNRLNWLRAAVLGANDGIVSTAGIVIGAIGATSDRNAIVIAGVAGLAAGAMSMAAGEYV SVSTQRDSELALLEKERRELLEEPEEELAELAGLYAAKGLPDDLALEVATVLTAQDALAAHAEVELGIDPDDIASPLHAA WASMLAFTIGALLPLLSITLASAETRVPLTVGVVVLALAITGWASARLGYSSPARAVARNVAGGLFAMAVTFAIGSALGT QI
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24857; Mature: 24725
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSEIEVPAGPHESEPHIRGFNNRLNWLRAAVLGANDGIVSTAGIVIGAIGATSDRNAI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCEE VIAGVAGLAAGAMSMAAGEYVSVSTQRDSELALLEKERRELLEEPEEELAELAGLYAAKG EEEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC LPDDLALEVATVLTAQDALAAHAEVELGIDPDDIASPLHAAWASMLAFTIGALLPLLSIT CCHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASAETRVPLTVGVVVLALAITGWASARLGYSSPARAVARNVAGGLFAMAVTFAIGSALG HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQI CCC >Mature Secondary Structure TTSEIEVPAGPHESEPHIRGFNNRLNWLRAAVLGANDGIVSTAGIVIGAIGATSDRNAI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCEE VIAGVAGLAAGAMSMAAGEYVSVSTQRDSELALLEKERRELLEEPEEELAELAGLYAAKG EEEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC LPDDLALEVATVLTAQDALAAHAEVELGIDPDDIASPLHAAWASMLAFTIGALLPLLSIT CCHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASAETRVPLTVGVVVLALAITGWASARLGYSSPARAVARNVAGGLFAMAVTFAIGSALG HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQI CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA