| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714526
Identifier: 119714526
GI number: 119714526
Start: 277105
End: 278469
Strand: Direct
Name: 119714526
Synonym: Noca_0259
Alternate gene names: NA
Gene position: 277105-278469 (Clockwise)
Preceding gene: 119714525
Following gene: 119714527
Centisome position: 5.56
GC content: 72.6
Gene sequence:
>1365_bases ATGCTCCGGGGTCAGGACGGACCACAGCCGGTGAGCAGGGCCGAGAGCCTCTACACGGCGCTCGTCCGACGGAACCCCGA GACCGAGCAGGAGATGCCTGCCCAGGTGCGGCGCAGCATCGCACCGAACGGGCTGCGCCAGGTGCTGGCCAACGCCCTGC AGTCCTCGGGCGACCAGCTGGTCAACGCCTCCACCGTGCTGCCCTGGCTGTTCGGAGCACTCGGCGTGCCGGCGGCGCTC ACGGGTCTGCTGGTGCCGGTGCGGGAGTCCGGGTCGATGCTGCCGCAGGCTGCCCTCACGCCGCTGGTGCTGCGCGCGCG CTACCGCAAACGGATCTTCGTCGCCGGCGCGCTCGTCCAGGCCGTGGCCGTCGCCTCGATGGCCGCGATCGCCGCGCTCG GCAGCGGCCTCGCCGCGGGGCTGGTCATCGTCGCCAGCCTGGTGGTCTTCGCGCTCGGCCGCTGCCTGTGCTCGATCGCG TCGAAGGACGTGCAGGGCCGCACGATCCCGAAGGGTGAGCGCGGCCAGATCAACGGGCTGGCGACCACCGCCGCCGGACT GGTGGCGATCACCCTCGGCCTCGCCGTACGCCTCCTCGGTGGCGAGGACCTCTCCGCCGGTCAGCTCGCAGGCCTGCTCG CCGCGGGTGCCGGCCTCTGGGTCGCCGTCGCCGTCGTCTACACCGGCATCCGTGAGCCCGCGGACGATCCGGCCGGCGGC GCGCCCGCGCGGAGTCCCGCCGACGACGCCGACACCTGGTTCACCCGGTCCCTCCGGCTGCTGAAGGAGGACGAGCACTT CCGGGACTTCGTCGGGGTGCGCAGCCTGTTGCTGGTCTCCTCGCTCAGCCCGCCGTTCGTCGTGACCCTGTCCACCCAGG CCGGAGCCGGCGGCCTCGCCGGTCTCGGCGGGTTCATCGTCGCCTCCGGCGTTGCCGCGCTGATCGGTGGCCGCCTGTTC GGCCGCTTCGCCGACCGCTCGAGCAGGCGCTTGATGAGCACCGGCGCCGGCGTCGCCTCGGCCGTCGTCATCGCGACCGT CGTGGTGGTCGCGGTCCCCGGGTCCACCGGCGAGGGCCGGTCGGGCAACATCCTCTTCATCGGTGCGTACTTCCTGCTCA CCCTGATGCACACCGGCGTGCGCGTCGGGCGGAAGACCTACGTCGTCGACATGGCCGAAGGGGACCGGCGCACCGAGTAC GTCGCGGTCTCGAACTCGGCCATGGGCCTGATCCTGCTCGTCGTCGGCGGCGTCAGCTCCGCGCTGGCCATCGTCCACAT CTCCTGGGCACTGCTGTTCCTCGCCGGCATGGGACTCGTCGGGGTGGTCGCCGGAGCGCGGCTTCCCGAGGTCGAACATC GCTGA
Upstream 100 bases:
>100_bases TCGCCGTTCCCCTGGTACTACTGATGCCGCGCGACCGGGGCAGGTCACCGACGCTGGTCGGACTCTGCGCGCCGAGCAGT TGCGGGCCGTGCCCGGTCGC
Downstream 100 bases:
>100_bases CCGACCGTTGGTCCAGACCGGCGGGCGATCCGCCGTGGGCGGCGTGCGTCCGGGCTACGGCCCCGAGCGATGCTGAGGGT GACGAGCGTGGGCCCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Facilitator Superfamily; Permease Of Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Protein; Permease Of Facilitator Superfamily; Facilitator Family Protein
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MLRGQDGPQPVSRAESLYTALVRRNPETEQEMPAQVRRSIAPNGLRQVLANALQSSGDQLVNASTVLPWLFGALGVPAAL TGLLVPVRESGSMLPQAALTPLVLRARYRKRIFVAGALVQAVAVASMAAIAALGSGLAAGLVIVASLVVFALGRCLCSIA SKDVQGRTIPKGERGQINGLATTAAGLVAITLGLAVRLLGGEDLSAGQLAGLLAAGAGLWVAVAVVYTGIREPADDPAGG APARSPADDADTWFTRSLRLLKEDEHFRDFVGVRSLLLVSSLSPPFVVTLSTQAGAGGLAGLGGFIVASGVAALIGGRLF GRFADRSSRRLMSTGAGVASAVVIATVVVVAVPGSTGEGRSGNILFIGAYFLLTLMHTGVRVGRKTYVVDMAEGDRRTEY VAVSNSAMGLILLVVGGVSSALAIVHISWALLFLAGMGLVGVVAGARLPEVEHR
Sequences:
>Translated_454_residues MLRGQDGPQPVSRAESLYTALVRRNPETEQEMPAQVRRSIAPNGLRQVLANALQSSGDQLVNASTVLPWLFGALGVPAAL TGLLVPVRESGSMLPQAALTPLVLRARYRKRIFVAGALVQAVAVASMAAIAALGSGLAAGLVIVASLVVFALGRCLCSIA SKDVQGRTIPKGERGQINGLATTAAGLVAITLGLAVRLLGGEDLSAGQLAGLLAAGAGLWVAVAVVYTGIREPADDPAGG APARSPADDADTWFTRSLRLLKEDEHFRDFVGVRSLLLVSSLSPPFVVTLSTQAGAGGLAGLGGFIVASGVAALIGGRLF GRFADRSSRRLMSTGAGVASAVVIATVVVVAVPGSTGEGRSGNILFIGAYFLLTLMHTGVRVGRKTYVVDMAEGDRRTEY VAVSNSAMGLILLVVGGVSSALAIVHISWALLFLAGMGLVGVVAGARLPEVEHR >Mature_454_residues MLRGQDGPQPVSRAESLYTALVRRNPETEQEMPAQVRRSIAPNGLRQVLANALQSSGDQLVNASTVLPWLFGALGVPAAL TGLLVPVRESGSMLPQAALTPLVLRARYRKRIFVAGALVQAVAVASMAAIAALGSGLAAGLVIVASLVVFALGRCLCSIA SKDVQGRTIPKGERGQINGLATTAAGLVAITLGLAVRLLGGEDLSAGQLAGLLAAGAGLWVAVAVVYTGIREPADDPAGG APARSPADDADTWFTRSLRLLKEDEHFRDFVGVRSLLLVSSLSPPFVVTLSTQAGAGGLAGLGGFIVASGVAALIGGRLF GRFADRSSRRLMSTGAGVASAVVIATVVVVAVPGSTGEGRSGNILFIGAYFLLTLMHTGVRVGRKTYVVDMAEGDRRTEY VAVSNSAMGLILLVVGGVSSALAIVHISWALLFLAGMGLVGVVAGARLPEVEHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46534; Mature: 46534
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGQDGPQPVSRAESLYTALVRRNPETEQEMPAQVRRSIAPNGLRQVLANALQSSGDQL CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH VNASTVLPWLFGALGVPAALTGLLVPVRESGSMLPQAALTPLVLRARYRKRIFVAGALVQ HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVAVASMAAIAALGSGLAAGLVIVASLVVFALGRCLCSIASKDVQGRTIPKGERGQINGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH ATTAAGLVAITLGLAVRLLGGEDLSAGQLAGLLAAGAGLWVAVAVVYTGIREPADDPAGG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC APARSPADDADTWFTRSLRLLKEDEHFRDFVGVRSLLLVSSLSPPFVVTLSTQAGAGGLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH GLGGFIVASGVAALIGGRLFGRFADRSSRRLMSTGAGVASAVVIATVVVVAVPGSTGEGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC SGNILFIGAYFLLTLMHTGVRVGRKTYVVDMAEGDRRTEYVAVSNSAMGLILLVVGGVSS CCCEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCHHH ALAIVHISWALLFLAGMGLVGVVAGARLPEVEHR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLRGQDGPQPVSRAESLYTALVRRNPETEQEMPAQVRRSIAPNGLRQVLANALQSSGDQL CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH VNASTVLPWLFGALGVPAALTGLLVPVRESGSMLPQAALTPLVLRARYRKRIFVAGALVQ HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVAVASMAAIAALGSGLAAGLVIVASLVVFALGRCLCSIASKDVQGRTIPKGERGQINGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH ATTAAGLVAITLGLAVRLLGGEDLSAGQLAGLLAAGAGLWVAVAVVYTGIREPADDPAGG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC APARSPADDADTWFTRSLRLLKEDEHFRDFVGVRSLLLVSSLSPPFVVTLSTQAGAGGLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH GLGGFIVASGVAALIGGRLFGRFADRSSRRLMSTGAGVASAVVIATVVVVAVPGSTGEGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC SGNILFIGAYFLLTLMHTGVRVGRKTYVVDMAEGDRRTEYVAVSNSAMGLILLVVGGVSS CCCEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCHHH ALAIVHISWALLFLAGMGLVGVVAGARLPEVEHR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA