| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is menB [H]
Identifier: 119714525
GI number: 119714525
Start: 276111
End: 277028
Strand: Direct
Name: menB [H]
Synonym: Noca_0258
Alternate gene names: 119714525
Gene position: 276111-277028 (Clockwise)
Preceding gene: 119714521
Following gene: 119714526
Centisome position: 5.54
GC content: 69.83
Gene sequence:
>918_bases ATGAGCGCGATCGACGGGGTGTCGGAGATCTTCGACGCCGACGCCTGGGACGTCGTCCCCGGCTTCGAGGACCTGACCGA CCTCACCTACCACCGGGCCCGGGAGCACGGCACCGTGCGGGTCGCCTTCGACCGACCCGACGTGCTGAACGCGTTCCGGC CGCACACGGTCGACGAGCTGCTGCGGGTGCTCGAGCACGCGCGCACGTCCAGCGACGTCGGCTGCGTCCTCCTGACCGGC AACGGACCGAGCGCGAAGAACGGGAAGTGGGCGTTCTGCACCGGCGGCGACCAGCGGATCCGCGGGCGCGCCGGCTATCA GTACGCGGAGGGCGAGACCGCCGAGACGGTCGACAAGGCCAAGCTGGGGAGGCTGCACATCCTCGAGGTGCAGCGGCTGA TCCGATTCATGCCCAAGATCGTCATCTGCGTGGTGCCCGGCTGGACGGCGGGCGGTGGCCACAGCCTGCACGTGGTCTGC GACCTCACGCTCGCGAGTGCCGAGGAGGCCCGGTTCAAGCAGACCGACGCGGACGTCGGGTCGTTCGACGGCGGGTTCGG ATCGGCGTACCTCGCCCGCCAGGTCGGCCAGAAGTTCGCCCGCGAGATCTTCTTCCTCGGCCAGGAGTACTCCGCCGAGG ACGGCGTGCGGATGGGCACCGTCAACCGCGCGGTCCCGCACGCCGAGCTCGAGGCGACCGCGCTGGAGTGGGGCCGGATC GTCAACGGCAAGTCGCCGACGGCGCAGCGGATGCTCAAGTACTCCTTCAACGCCATCGACGACGGCCTGGTCGGTCAGCA GCTCTTCGCCGGCGAGACCACCCGCCTGGCGTACATGACCGACGAGGCCCAGGAGGGCCGCGACCAGTTCCTGGAGAAGC GCGACCCTGACTGGTCGCCGTTCCCCTGGTACTACTGA
Upstream 100 bases:
>100_bases GACCCATTGCTGGGGGTTGGGCTCGTACTCGCCGTCAAGTGTCATATCTGGTCAATGCCCAGTCGGCCTCGCGGCATTCC CCGGCGATAGCCTCGCCCGC
Downstream 100 bases:
>100_bases TGCCGCGCGACCGGGGCAGGTCACCGACGCTGGTCGGACTCTGCGCGCCGAGCAGTTGCGGGCCGTGCCCGGTCGCATGC TCCGGGGTCAGGACGGACCA
Product: 1,4-dihydroxy-2-naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSAIDGVSEIFDADAWDVVPGFEDLTDLTYHRAREHGTVRVAFDRPDVLNAFRPHTVDELLRVLEHARTSSDVGCVLLTG NGPSAKNGKWAFCTGGDQRIRGRAGYQYAEGETAETVDKAKLGRLHILEVQRLIRFMPKIVICVVPGWTAGGGHSLHVVC DLTLASAEEARFKQTDADVGSFDGGFGSAYLARQVGQKFAREIFFLGQEYSAEDGVRMGTVNRAVPHAELEATALEWGRI VNGKSPTAQRMLKYSFNAIDDGLVGQQLFAGETTRLAYMTDEAQEGRDQFLEKRDPDWSPFPWYY
Sequences:
>Translated_305_residues MSAIDGVSEIFDADAWDVVPGFEDLTDLTYHRAREHGTVRVAFDRPDVLNAFRPHTVDELLRVLEHARTSSDVGCVLLTG NGPSAKNGKWAFCTGGDQRIRGRAGYQYAEGETAETVDKAKLGRLHILEVQRLIRFMPKIVICVVPGWTAGGGHSLHVVC DLTLASAEEARFKQTDADVGSFDGGFGSAYLARQVGQKFAREIFFLGQEYSAEDGVRMGTVNRAVPHAELEATALEWGRI VNGKSPTAQRMLKYSFNAIDDGLVGQQLFAGETTRLAYMTDEAQEGRDQFLEKRDPDWSPFPWYY >Mature_304_residues SAIDGVSEIFDADAWDVVPGFEDLTDLTYHRAREHGTVRVAFDRPDVLNAFRPHTVDELLRVLEHARTSSDVGCVLLTGN GPSAKNGKWAFCTGGDQRIRGRAGYQYAEGETAETVDKAKLGRLHILEVQRLIRFMPKIVICVVPGWTAGGGHSLHVVCD LTLASAEEARFKQTDADVGSFDGGFGSAYLARQVGQKFAREIFFLGQEYSAEDGVRMGTVNRAVPHAELEATALEWGRIV NGKSPTAQRMLKYSFNAIDDGLVGQQLFAGETTRLAYMTDEAQEGRDQFLEKRDPDWSPFPWYY
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=277, Percent_Identity=26.3537906137184, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI31542718, Length=268, Percent_Identity=26.1194029850746, Blast_Score=75, Evalue=6e-14, Organism=Escherichia coli, GI1788597, Length=286, Percent_Identity=45.4545454545455, Blast_Score=234, Evalue=7e-63, Organism=Escherichia coli, GI1787659, Length=275, Percent_Identity=25.8181818181818, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082183, Length=267, Percent_Identity=23.5955056179775, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI221142681, Length=275, Percent_Identity=26.1818181818182, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787660, Length=268, Percent_Identity=27.6119402985075, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17554946, Length=259, Percent_Identity=27.4131274131274, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI25145438, Length=265, Percent_Identity=26.0377358490566, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI20129971, Length=260, Percent_Identity=25, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24653477, Length=260, Percent_Identity=25, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 33798; Mature: 33667
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIDGVSEIFDADAWDVVPGFEDLTDLTYHRAREHGTVRVAFDRPDVLNAFRPHTVDEL CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCHHHH LRVLEHARTSSDVGCVLLTGNGPSAKNGKWAFCTGGDQRIRGRAGYQYAEGETAETVDKA HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCEECCCCCHHHHHHH KLGRLHILEVQRLIRFMPKIVICVVPGWTAGGGHSLHVVCDLTLASAEEARFKQTDADVG HCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCC SFDGGFGSAYLARQVGQKFAREIFFLGQEYSAEDGVRMGTVNRAVPHAELEATALEWGRI CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHCCCCCHHHHHHHHHHHH VNGKSPTAQRMLKYSFNAIDDGLVGQQLFAGETTRLAYMTDEAQEGRDQFLEKRDPDWSP CCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC FPWYY CCCCC >Mature Secondary Structure SAIDGVSEIFDADAWDVVPGFEDLTDLTYHRAREHGTVRVAFDRPDVLNAFRPHTVDEL CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCHHHH LRVLEHARTSSDVGCVLLTGNGPSAKNGKWAFCTGGDQRIRGRAGYQYAEGETAETVDKA HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCEECCCCCHHHHHHH KLGRLHILEVQRLIRFMPKIVICVVPGWTAGGGHSLHVVCDLTLASAEEARFKQTDADVG HCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCC SFDGGFGSAYLARQVGQKFAREIFFLGQEYSAEDGVRMGTVNRAVPHAELEATALEWGRI CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHCCCCCHHHHHHHHHHHH VNGKSPTAQRMLKYSFNAIDDGLVGQQLFAGETTRLAYMTDEAQEGRDQFLEKRDPDWSP CCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC FPWYY CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]