| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cutL [H]
Identifier: 119714491
GI number: 119714491
Start: 240198
End: 242573
Strand: Direct
Name: cutL [H]
Synonym: Noca_0224
Alternate gene names: 119714491
Gene position: 240198-242573 (Clockwise)
Preceding gene: 119714490
Following gene: 119714492
Centisome position: 4.82
GC content: 71.76
Gene sequence:
>2376_bases ATGACCGCGACCGTCCCGATCGGGCACGGCCGGATGCTCCGCAAGGAGGACCGGCGGTTCGTGCGCGGCCGCGGGAAGTA CCTCGACGACATCGCGCTGCCGGGAATGCTGCACCTCGCCGTGCTGCGGTCGCCGGTCGCGCACGCGCGGATCCTCTCCA TCGACACGCTCGCGGCCGAGGCGCACCCGAAGGTGAAGGCGGTCGTCACCGGCGCGCTGCTCGCCGAGCGCGGCCTCGCC TGGATGCCCACCCTCTCCGGCGACGTGCAGGCCGTGCTGGCCACCGACAAGGTCCGCTTCCAGGGCCAGGAGGTCGCGTT CGTCGTCGCCGAGGACCGCTACTCCGCGCGCGACGCCCTCGAGCTGATCGACGTCGAGTACGACGTGCTCCCGCCGGTCG TCGACGTGCGCCGCGCCCTCGACGCGGACGCCCCGCTCATCCGCGACGACGTGGCCGGCAAGACCGACAACCACTGCTTC GACTGGGAGACCGGTGACGCGGCGGCGACCGACGCGGTGTTCGACCGGGCCGAGGTCGTCGTCCGACAGGAGATCGTGTT CCCGCGGGTGCACCCGGCACCGCTGGAGACTTGCGGCGCGGTCGCCGACTACGACCGGGTCGAGCAGAAGCTCACCCTCT GGGCGACCACCCAGGCGCCGCACGCCCACCGGACGCTGTACTCCATGTTCGCGGGCCTCCCCGAGCACAAGATCCGGGTG ATCTCGCCGGACATCGGCGGCGGCTTCGGCAACAAGGTGCCGATCTACCCCGGCTACGTCTGCGCGATCGTGGGCTCGAT GGTCACCGGCCGGCCGGTGAAGTGGACCGAGGACCGCACCGAGAACCTCGTGGCGTCCGGGTTCGCCCGCGACTACGTGA TGCAGGGCGAGATCGCCGCGACCCGCGACGGGCGGATCCTCGCGCTGCGCAGCCACGTGCTCGCCGACCACGGCGCCTTC AACGGGACCGCGGCGCCGCGGAAGTTCCCGGGCGGCTTCTTCGGCGTCTTCACCGGCAGCTACGACATCGAGGCGGCGTA CTGCTCGATGACCGCGGTGCACACCAACAAGGCGCCCGGCGGGGTCGCCTATGCGTGCTCGTTCCGGATCGCCGAGGCCG TCTACCTGGTCGAGCGGATGGTCGACCTGCTCGCCGACGAGCTCGGCATCGACCCGGTCGAGCTGCGGCTGCGCAACTTC ATCCGCAGCGACCAGTTCCCGTACACGTCGCGCACCGGCTGGGTCTACGACTCCGGCGACTACGCGACGACCATGCAGGA GGCGCTGCGGATCGCGGGGTACGACGAGCTCCGGGCCGAGCAGGCCGCGCGCCGCGCCGCCGGGGACGGGCAGAGCCTGA TGGGGATCGGCGTCTCGTTCTTCACCGAGGCCGTCGGGGCCGGTCCGCGCAAGGACATGGACATGCTCGGCCTCGGCATG GCCGACGGGTGTGAGCTGCGGGTGCACCCGACCGGGTCGGCCGTGCTGCGGATCGCGGTGCAGACGCAGGGCCAGGGGCA CGAGACGACCTTCGCCCAGCTGGTCGCCGAGGAGCTCGGCATCCACCCCGAGAACATCGACGTGGTGCACGGCGACACCG ACAACACGCCTTACGGCCTGGGAACGTACGGGTCGCGGTCGACCCCGGTGTCCGGGGCGGCGGCGGTCATCGCGTCGCGG CGGGTACGCGAGAAGGCGCGGCTGATCGCGGCCGGGATGCTCGAGGTGGCCCCGGACGACCTCGAGTGGACCAAGGACGC GGCCGGGGGGCGGTTCGGCGTGCGGGGGGTCCCCGGCGCGAGCGTCACGATCGAGCAGGTCGCGATGCGCGCGCACGGCG CCGACGAGCTCCCCGAGGGTGTGGAGGGCGGGCTGGACGCGCAGGTGTCCTACAACCCCGACAACCTCACCTATCCCTAC GGCGCCTACATCTGCGTCGTCGACATCGACCCCGGCACCGCCGTGGTCAAGGTGCGGCGGTTCGTCGCCGTCGACGACTG CGGGACCCGCATCAACGAGATGATCGTCGAGGGGCAGATCCACGGCGGTCTGACCGACGGGGTCGGCATGGCCCTGATGG AGTACATCGGGTACGACGAGCACGGCAACTGCCTCGGCGGCTCGCTCATGGACTACCTGATCCCCACGGCCAAGGAGGTG CCCGACTGGGAGACCGGCATGACCGTCACCCCCTCGCCGCACCACCCGATCGGCGCCAAGGGTGTCGGCGAGTCCGCCAC CGTCGGCTCTCCGCCTGCGGTCGTCAACGCGGTGATCGACGCGCTCGCGCCGTACGGCGTGCGGCACGCCGACATGCCGC TCACCCCGTCCCGGGTCTGGGAGGCGATGCACGGCCGTGCCACGCCTCCTCAGTGA
Upstream 100 bases:
>100_bases GGGAGGCGATCTCGGGACAGATCTGCCGGTGCACCGGCTACGCCTCGATCGTCCGCTCCGTGCGCTGGGCCGCCGACCAC CCCGAGGGGAGGATCGAGGC
Downstream 100 bases:
>100_bases CGCCACCGCGCTGGTGCTGGCGGCCGGCGGCTCGTCCCGCCTCGGCCGGCCCAAGCAGCTGCTGCCGCTCGGTGGCGCGA CGCTGCTCGACGCGACCCTG
Product: carbon monoxide dehydrogenase, large subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 791; Mature: 790
Protein sequence:
>791_residues MTATVPIGHGRMLRKEDRRFVRGRGKYLDDIALPGMLHLAVLRSPVAHARILSIDTLAAEAHPKVKAVVTGALLAERGLA WMPTLSGDVQAVLATDKVRFQGQEVAFVVAEDRYSARDALELIDVEYDVLPPVVDVRRALDADAPLIRDDVAGKTDNHCF DWETGDAAATDAVFDRAEVVVRQEIVFPRVHPAPLETCGAVADYDRVEQKLTLWATTQAPHAHRTLYSMFAGLPEHKIRV ISPDIGGGFGNKVPIYPGYVCAIVGSMVTGRPVKWTEDRTENLVASGFARDYVMQGEIAATRDGRILALRSHVLADHGAF NGTAAPRKFPGGFFGVFTGSYDIEAAYCSMTAVHTNKAPGGVAYACSFRIAEAVYLVERMVDLLADELGIDPVELRLRNF IRSDQFPYTSRTGWVYDSGDYATTMQEALRIAGYDELRAEQAARRAAGDGQSLMGIGVSFFTEAVGAGPRKDMDMLGLGM ADGCELRVHPTGSAVLRIAVQTQGQGHETTFAQLVAEELGIHPENIDVVHGDTDNTPYGLGTYGSRSTPVSGAAAVIASR RVREKARLIAAGMLEVAPDDLEWTKDAAGGRFGVRGVPGASVTIEQVAMRAHGADELPEGVEGGLDAQVSYNPDNLTYPY GAYICVVDIDPGTAVVKVRRFVAVDDCGTRINEMIVEGQIHGGLTDGVGMALMEYIGYDEHGNCLGGSLMDYLIPTAKEV PDWETGMTVTPSPHHPIGAKGVGESATVGSPPAVVNAVIDALAPYGVRHADMPLTPSRVWEAMHGRATPPQ
Sequences:
>Translated_791_residues MTATVPIGHGRMLRKEDRRFVRGRGKYLDDIALPGMLHLAVLRSPVAHARILSIDTLAAEAHPKVKAVVTGALLAERGLA WMPTLSGDVQAVLATDKVRFQGQEVAFVVAEDRYSARDALELIDVEYDVLPPVVDVRRALDADAPLIRDDVAGKTDNHCF DWETGDAAATDAVFDRAEVVVRQEIVFPRVHPAPLETCGAVADYDRVEQKLTLWATTQAPHAHRTLYSMFAGLPEHKIRV ISPDIGGGFGNKVPIYPGYVCAIVGSMVTGRPVKWTEDRTENLVASGFARDYVMQGEIAATRDGRILALRSHVLADHGAF NGTAAPRKFPGGFFGVFTGSYDIEAAYCSMTAVHTNKAPGGVAYACSFRIAEAVYLVERMVDLLADELGIDPVELRLRNF IRSDQFPYTSRTGWVYDSGDYATTMQEALRIAGYDELRAEQAARRAAGDGQSLMGIGVSFFTEAVGAGPRKDMDMLGLGM ADGCELRVHPTGSAVLRIAVQTQGQGHETTFAQLVAEELGIHPENIDVVHGDTDNTPYGLGTYGSRSTPVSGAAAVIASR RVREKARLIAAGMLEVAPDDLEWTKDAAGGRFGVRGVPGASVTIEQVAMRAHGADELPEGVEGGLDAQVSYNPDNLTYPY GAYICVVDIDPGTAVVKVRRFVAVDDCGTRINEMIVEGQIHGGLTDGVGMALMEYIGYDEHGNCLGGSLMDYLIPTAKEV PDWETGMTVTPSPHHPIGAKGVGESATVGSPPAVVNAVIDALAPYGVRHADMPLTPSRVWEAMHGRATPPQ >Mature_790_residues TATVPIGHGRMLRKEDRRFVRGRGKYLDDIALPGMLHLAVLRSPVAHARILSIDTLAAEAHPKVKAVVTGALLAERGLAW MPTLSGDVQAVLATDKVRFQGQEVAFVVAEDRYSARDALELIDVEYDVLPPVVDVRRALDADAPLIRDDVAGKTDNHCFD WETGDAAATDAVFDRAEVVVRQEIVFPRVHPAPLETCGAVADYDRVEQKLTLWATTQAPHAHRTLYSMFAGLPEHKIRVI SPDIGGGFGNKVPIYPGYVCAIVGSMVTGRPVKWTEDRTENLVASGFARDYVMQGEIAATRDGRILALRSHVLADHGAFN GTAAPRKFPGGFFGVFTGSYDIEAAYCSMTAVHTNKAPGGVAYACSFRIAEAVYLVERMVDLLADELGIDPVELRLRNFI RSDQFPYTSRTGWVYDSGDYATTMQEALRIAGYDELRAEQAARRAAGDGQSLMGIGVSFFTEAVGAGPRKDMDMLGLGMA DGCELRVHPTGSAVLRIAVQTQGQGHETTFAQLVAEELGIHPENIDVVHGDTDNTPYGLGTYGSRSTPVSGAAAVIASRR VREKARLIAAGMLEVAPDDLEWTKDAAGGRFGVRGVPGASVTIEQVAMRAHGADELPEGVEGGLDAQVSYNPDNLTYPYG AYICVVDIDPGTAVVKVRRFVAVDDCGTRINEMIVEGQIHGGLTDGVGMALMEYIGYDEHGNCLGGSLMDYLIPTAKEVP DWETGMTVTPSPHHPIGAKGVGESATVGSPPAVVNAVIDALAPYGVRHADMPLTPSRVWEAMHGRATPPQ
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=805, Percent_Identity=23.7267080745342, Blast_Score=127, Evalue=5e-29, Organism=Homo sapiens, GI91823271, Length=796, Percent_Identity=21.7336683417085, Blast_Score=94, Evalue=4e-19, Organism=Escherichia coli, GI1789230, Length=776, Percent_Identity=28.7371134020619, Blast_Score=251, Evalue=1e-67, Organism=Escherichia coli, GI1789246, Length=807, Percent_Identity=27.2614622057001, Blast_Score=219, Evalue=5e-58, Organism=Escherichia coli, GI1786478, Length=768, Percent_Identity=24.8697916666667, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17540638, Length=789, Percent_Identity=24.0811153358682, Blast_Score=139, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 84939; Mature: 84808
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATVPIGHGRMLRKEDRRFVRGRGKYLDDIALPGMLHLAVLRSPVAHARILSIDTLAAE CCEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCCHHHHEEEEEHHHHHC AHPKVKAVVTGALLAERGLAWMPTLSGDVQAVLATDKVRFQGQEVAFVVAEDRYSARDAL CCCCCHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCEEECCCEEEEEEECCCCCHHHHH ELIDVEYDVLPPVVDVRRALDADAPLIRDDVAGKTDNHCFDWETGDAAATDAVFDRAEVV HHHCCCHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHH VRQEIVFPRVHPAPLETCGAVADYDRVEQKLTLWATTQAPHAHRTLYSMFAGLPEHKIRV HHHHHHCCCCCCCCHHHHCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCEEE ISPDIGGGFGNKVPIYPGYVCAIVGSMVTGRPVKWTEDRTENLVASGFARDYVMQGEIAA ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEE TRDGRILALRSHVLADHGAFNGTAAPRKFPGGFFGVFTGSYDIEAAYCSMTAVHTNKAPG CCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEECEEEEEEEEEEECCCCCC GVAYACSFRIAEAVYLVERMVDLLADELGIDPVELRLRNFIRSDQFPYTSRTGWVYDSGD CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCC YATTMQEALRIAGYDELRAEQAARRAAGDGQSLMGIGVSFFTEAVGAGPRKDMDMLGLGM HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCC ADGCELRVHPTGSAVLRIAVQTQGQGHETTFAQLVAEELGIHPENIDVVHGDTDNTPYGL CCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC GTYGSRSTPVSGAAAVIASRRVREKARLIAAGMLEVAPDDLEWTKDAAGGRFGVRGVPGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC SVTIEQVAMRAHGADELPEGVEGGLDAQVSYNPDNLTYPYGAYICVVDIDPGTAVVKVRR CHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEEHEEH FVAVDDCGTRINEMIVEGQIHGGLTDGVGMALMEYIGYDEHGNCLGGSLMDYLIPTAKEV HEEECHHHHHHHHHHEECEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC PDWETGMTVTPSPHHPIGAKGVGESATVGSPPAVVNAVIDALAPYGVRHADMPLTPSRVW CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH EAMHGRATPPQ HHHCCCCCCCC >Mature Secondary Structure TATVPIGHGRMLRKEDRRFVRGRGKYLDDIALPGMLHLAVLRSPVAHARILSIDTLAAE CEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCCHHHHEEEEEHHHHHC AHPKVKAVVTGALLAERGLAWMPTLSGDVQAVLATDKVRFQGQEVAFVVAEDRYSARDAL CCCCCHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCEEECCCEEEEEEECCCCCHHHHH ELIDVEYDVLPPVVDVRRALDADAPLIRDDVAGKTDNHCFDWETGDAAATDAVFDRAEVV HHHCCCHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHH VRQEIVFPRVHPAPLETCGAVADYDRVEQKLTLWATTQAPHAHRTLYSMFAGLPEHKIRV HHHHHHCCCCCCCCHHHHCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCEEE ISPDIGGGFGNKVPIYPGYVCAIVGSMVTGRPVKWTEDRTENLVASGFARDYVMQGEIAA ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEE TRDGRILALRSHVLADHGAFNGTAAPRKFPGGFFGVFTGSYDIEAAYCSMTAVHTNKAPG CCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEECEEEEEEEEEEECCCCCC GVAYACSFRIAEAVYLVERMVDLLADELGIDPVELRLRNFIRSDQFPYTSRTGWVYDSGD CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCC YATTMQEALRIAGYDELRAEQAARRAAGDGQSLMGIGVSFFTEAVGAGPRKDMDMLGLGM HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCC ADGCELRVHPTGSAVLRIAVQTQGQGHETTFAQLVAEELGIHPENIDVVHGDTDNTPYGL CCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC GTYGSRSTPVSGAAAVIASRRVREKARLIAAGMLEVAPDDLEWTKDAAGGRFGVRGVPGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC SVTIEQVAMRAHGADELPEGVEGGLDAQVSYNPDNLTYPYGAYICVVDIDPGTAVVKVRR CHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEEHEEH FVAVDDCGTRINEMIVEGQIHGGLTDGVGMALMEYIGYDEHGNCLGGSLMDYLIPTAKEV HEEECHHHHHHHHHHEECEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC PDWETGMTVTPSPHHPIGAKGVGESATVGSPPAVVNAVIDALAPYGVRHADMPLTPSRVW CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH EAMHGRATPPQ HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]