| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ygfJ [C]
Identifier: 119714492
GI number: 119714492
Start: 242554
End: 243147
Strand: Direct
Name: ygfJ [C]
Synonym: Noca_0225
Alternate gene names: 119714492
Gene position: 242554-243147 (Clockwise)
Preceding gene: 119714491
Following gene: 119714493
Centisome position: 4.86
GC content: 75.76
Gene sequence:
>594_bases GTGCCACGCCTCCTCAGTGACGCCACCGCGCTGGTGCTGGCGGCCGGCGGCTCGTCCCGCCTCGGCCGGCCCAAGCAGCT GCTGCCGCTCGGTGGCGCGACGCTGCTCGACGCGACCCTGTCCGCCGTCCGGCGGTGCGGGTTCGGCCAGGTGGTCCTCG CCCTCGGCGGCGCGGCCGACGAGGTCGCAGCCACCGTCGACCTCTCGGGCGTGGACGTCGTGCGGAACCCGGGGTTCGGC GCCGGCTGCTCCTCGTCGATCGCCGCCGCGCTCCCCGCCATCAGCGCGACGTCCGAGGGTCTCGTGCTGATGCTCGGCGA CCAGCCCGAGGTCTCCCCGGCCGCGGTGGCCGCGGTGGCCGCGGTCGACGCGGACCTCGCGGTGTGCCGGTACGACAACG GGCTCGGCCATCCGTTCTGGCTGGGCCGCTCCCGCTTCGGCGAGCTGGCGAACCTGCACGGCGACAAGGCCGTGTGGAAG CTCGTGGACGCCGCGGGTGACGCGCTCGTGACCGTGCCGGTCGTCGGCGACGTACCGGCCGACGTCGACACCGAGGCGGA CTACCGGGCGCTGCTGGCGAGGTGGGACCGGTGA
Upstream 100 bases:
>100_bases GCGGTCGTCAACGCGGTGATCGACGCGCTCGCGCCGTACGGCGTGCGGCACGCCGACATGCCGCTCACCCCGTCCCGGGT CTGGGAGGCGATGCACGGCC
Downstream 100 bases:
>100_bases CCCCGACCCAGCTCCGGGCGTTCGCGACCGTCGTCCGCCTCGGGTCGGTCAAGGCCGCGGCCGCCGAGCTCGAGGTGTCG GAGGCGGCGGTGTCCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAADEVAATVDLSGVDVVRNPGFG AGCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVAAVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWK LVDAAGDALVTVPVVGDVPADVDTEADYRALLARWDR
Sequences:
>Translated_197_residues MPRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAADEVAATVDLSGVDVVRNPGFG AGCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVAAVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWK LVDAAGDALVTVPVVGDVPADVDTEADYRALLARWDR >Mature_196_residues PRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAADEVAATVDLSGVDVVRNPGFGA GCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVAAVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWKL VDAAGDALVTVPVVGDVPADVDTEADYRALLARWDR
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19954; Mature: 19823
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAAD CCCCCCCCEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH EVAATVDLSGVDVVRNPGFGAGCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVA HHEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHH AVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWKLVDAAGDALVTVPVVGDVPA HHCCCEEEEEECCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCC DVDTEADYRALLARWDR CCCCCHHHHHHHHHCCC >Mature Secondary Structure PRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAAD CCCCCCCEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH EVAATVDLSGVDVVRNPGFGAGCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVA HHEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHH AVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWKLVDAAGDALVTVPVVGDVPA HHCCCEEEEEECCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCC DVDTEADYRALLARWDR CCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA