Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is ygfJ [C]

Identifier: 119714492

GI number: 119714492

Start: 242554

End: 243147

Strand: Direct

Name: ygfJ [C]

Synonym: Noca_0225

Alternate gene names: 119714492

Gene position: 242554-243147 (Clockwise)

Preceding gene: 119714491

Following gene: 119714493

Centisome position: 4.86

GC content: 75.76

Gene sequence:

>594_bases
GTGCCACGCCTCCTCAGTGACGCCACCGCGCTGGTGCTGGCGGCCGGCGGCTCGTCCCGCCTCGGCCGGCCCAAGCAGCT
GCTGCCGCTCGGTGGCGCGACGCTGCTCGACGCGACCCTGTCCGCCGTCCGGCGGTGCGGGTTCGGCCAGGTGGTCCTCG
CCCTCGGCGGCGCGGCCGACGAGGTCGCAGCCACCGTCGACCTCTCGGGCGTGGACGTCGTGCGGAACCCGGGGTTCGGC
GCCGGCTGCTCCTCGTCGATCGCCGCCGCGCTCCCCGCCATCAGCGCGACGTCCGAGGGTCTCGTGCTGATGCTCGGCGA
CCAGCCCGAGGTCTCCCCGGCCGCGGTGGCCGCGGTGGCCGCGGTCGACGCGGACCTCGCGGTGTGCCGGTACGACAACG
GGCTCGGCCATCCGTTCTGGCTGGGCCGCTCCCGCTTCGGCGAGCTGGCGAACCTGCACGGCGACAAGGCCGTGTGGAAG
CTCGTGGACGCCGCGGGTGACGCGCTCGTGACCGTGCCGGTCGTCGGCGACGTACCGGCCGACGTCGACACCGAGGCGGA
CTACCGGGCGCTGCTGGCGAGGTGGGACCGGTGA

Upstream 100 bases:

>100_bases
GCGGTCGTCAACGCGGTGATCGACGCGCTCGCGCCGTACGGCGTGCGGCACGCCGACATGCCGCTCACCCCGTCCCGGGT
CTGGGAGGCGATGCACGGCC

Downstream 100 bases:

>100_bases
CCCCGACCCAGCTCCGGGCGTTCGCGACCGTCGTCCGCCTCGGGTCGGTCAAGGCCGCGGCCGCCGAGCTCGAGGTGTCG
GAGGCGGCGGTGTCCCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAADEVAATVDLSGVDVVRNPGFG
AGCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVAAVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWK
LVDAAGDALVTVPVVGDVPADVDTEADYRALLARWDR

Sequences:

>Translated_197_residues
MPRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAADEVAATVDLSGVDVVRNPGFG
AGCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVAAVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWK
LVDAAGDALVTVPVVGDVPADVDTEADYRALLARWDR
>Mature_196_residues
PRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAADEVAATVDLSGVDVVRNPGFGA
GCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVAAVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWKL
VDAAGDALVTVPVVGDVPADVDTEADYRALLARWDR

Specific function: Unknown

COG id: COG2068

COG function: function code R; Uncharacterized MobA-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19954; Mature: 19823

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAAD
CCCCCCCCEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH
EVAATVDLSGVDVVRNPGFGAGCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVA
HHEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHH
AVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWKLVDAAGDALVTVPVVGDVPA
HHCCCEEEEEECCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCC
DVDTEADYRALLARWDR
CCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
PRLLSDATALVLAAGGSSRLGRPKQLLPLGGATLLDATLSAVRRCGFGQVVLALGGAAD
CCCCCCCEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH
EVAATVDLSGVDVVRNPGFGAGCSSSIAAALPAISATSEGLVLMLGDQPEVSPAAVAAVA
HHEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHH
AVDADLAVCRYDNGLGHPFWLGRSRFGELANLHGDKAVWKLVDAAGDALVTVPVVGDVPA
HHCCCEEEEEECCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCC
DVDTEADYRALLARWDR
CCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA