| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cutS [H]
Identifier: 119714490
GI number: 119714490
Start: 239725
End: 240201
Strand: Direct
Name: cutS [H]
Synonym: Noca_0223
Alternate gene names: 119714490
Gene position: 239725-240201 (Clockwise)
Preceding gene: 119714489
Following gene: 119714491
Centisome position: 4.81
GC content: 70.02
Gene sequence:
>477_bases GTGGAGGTGACCCTCACGGTGAACGGCGAGGTCGTCACCCGCGACGTGGAGGCGCGCCTGCTGCTCGTGCACTTCCTGCG CGACGACCTCGGCCTGACCGGTACGCACTGGGGCTGCGACACCAGTAACTGCGGCAGCTGCGTGGTCCTGTACGACGACG AGCCGGTCAAGTCGTGCACCGTGCTCACCGCGATGGCCGCCGGTCATGACGTCCGCACCGTCGAGGACCTCGAGCAGGAC GGGGAGCTCGACCCGGTGCAGCAGGGCTTCATGGAGTGCCACGGCCTCCAGTGCGGCTTCTGCACCTCCGGGATGCTGAT GTCCGCCCGGGCGCTGCTCGACCGCGACCCGGACCCGAGCGAGGAGGACATCCGGGAGGCGATCTCGGGACAGATCTGCC GGTGCACCGGCTACGCCTCGATCGTCCGCTCCGTGCGCTGGGCCGCCGACCACCCCGAGGGGAGGATCGAGGCATGA
Upstream 100 bases:
>100_bases GACCGGTCACCGACGGCCGCGGGAGCGCGGACTACAAGCGCCACCTGGCCGGGGAGCTCACCCGGCGTACGCTGCGCACG GCCTGGGAGCGGGTGGTCAC
Downstream 100 bases:
>100_bases CCGCGACCGTCCCGATCGGGCACGGCCGGATGCTCCGCAAGGAGGACCGGCGGTTCGTGCGCGGCCGCGGGAAGTACCTC GACGACATCGCGCTGCCGGG
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MEVTLTVNGEVVTRDVEARLLLVHFLRDDLGLTGTHWGCDTSNCGSCVVLYDDEPVKSCTVLTAMAAGHDVRTVEDLEQD GELDPVQQGFMECHGLQCGFCTSGMLMSARALLDRDPDPSEEDIREAISGQICRCTGYASIVRSVRWAADHPEGRIEA
Sequences:
>Translated_158_residues MEVTLTVNGEVVTRDVEARLLLVHFLRDDLGLTGTHWGCDTSNCGSCVVLYDDEPVKSCTVLTAMAAGHDVRTVEDLEQD GELDPVQQGFMECHGLQCGFCTSGMLMSARALLDRDPDPSEEDIREAISGQICRCTGYASIVRSVRWAADHPEGRIEA >Mature_158_residues MEVTLTVNGEVVTRDVEARLLLVHFLRDDLGLTGTHWGCDTSNCGSCVVLYDDEPVKSCTVLTAMAAGHDVRTVEDLEQD GELDPVQQGFMECHGLQCGFCTSGMLMSARALLDRDPDPSEEDIREAISGQICRCTGYASIVRSVRWAADHPEGRIEA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=157, Percent_Identity=35.6687898089172, Blast_Score=84, Evalue=7e-17, Organism=Homo sapiens, GI91823271, Length=152, Percent_Identity=38.8157894736842, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1786480, Length=164, Percent_Identity=36.5853658536585, Blast_Score=113, Evalue=5e-27, Organism=Escherichia coli, GI1789232, Length=142, Percent_Identity=37.3239436619718, Blast_Score=99, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17540638, Length=149, Percent_Identity=38.255033557047, Blast_Score=106, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17539860, Length=154, Percent_Identity=37.012987012987, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI32566215, Length=154, Percent_Identity=37.012987012987, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI17737937, Length=158, Percent_Identity=37.3417721518987, Blast_Score=90, Evalue=7e-19, Organism=Drosophila melanogaster, GI24647201, Length=155, Percent_Identity=31.6129032258064, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI24647197, Length=161, Percent_Identity=32.2981366459627, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647199, Length=155, Percent_Identity=28.3870967741935, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24647193, Length=161, Percent_Identity=32.2981366459627, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24647195, Length=161, Percent_Identity=32.2981366459627, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 17261; Mature: 17261
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTLTVNGEVVTRDVEARLLLVHFLRDDLGLTGTHWGCDTSNCGSCVVLYDDEPVKSCT CEEEEEECCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH VLTAMAAGHDVRTVEDLEQDGELDPVQQGFMECHGLQCGFCTSGMLMSARALLDRDPDPS HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC EEDIREAISGQICRCTGYASIVRSVRWAADHPEGRIEA HHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MEVTLTVNGEVVTRDVEARLLLVHFLRDDLGLTGTHWGCDTSNCGSCVVLYDDEPVKSCT CEEEEEECCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH VLTAMAAGHDVRTVEDLEQDGELDPVQQGFMECHGLQCGFCTSGMLMSARALLDRDPDPS HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC EEDIREAISGQICRCTGYASIVRSVRWAADHPEGRIEA HHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]