| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714349
Identifier: 119714349
GI number: 119714349
Start: 91912
End: 92895
Strand: Direct
Name: 119714349
Synonym: Noca_0081
Alternate gene names: NA
Gene position: 91912-92895 (Clockwise)
Preceding gene: 119714348
Following gene: 119714350
Centisome position: 1.84
GC content: 72.97
Gene sequence:
>984_bases GTGAGCGAGCCGAGGCCGCGCCCGGCCGCGCGCGAGCCGCTCGTGCTCGACGCGGCCGTGCCCCTCGTCTCGCATCCCCG GCACCTGTCGGCTCTGCTCCCTGCGCTGACCGCGGGCGGCGTCGGCGTCCTCCTGCCGACCGTCGCGTCCATCGAGGACC TGGCCACCGTCAGCTCGACGCTGGGCGCGTGGCGAGCCTTCGAGGACGGACCGCCGCCCGGGGCGCGGTTGGCGCGATCG GTCTCCGACATCCGTGCCGCGCAGGCCGCCGGTGACCTGGCGGTCGTGCTCCACGTGCAGGGGCTGCACGCGGTCGGCGC GGAGCTCGACCGGCTCGAGCTCTACGCCGCCGCGGGGGTGAAGGTCGCGCAGCTGACCTACAACTACCGCAACTACCTGG CCGACGGATGCCTGGAGCCGGCCGACGCCGGGCTCAGCGAGTCCGGGCGTGCGGTCGTGGAGCGACTCAACCTGCTCCGG ATCGTCCCGGACGTCTCGCACACGGGAGAGCGGTCCAGTCTCGAGATCGTCGAGATCTCCACGTCTCCGGTGATCGCCAG CCACAGCAACGCCAAGGCGCTGTGCGACCACCCCCGGAACCTCGGTGACGGCCTCGCACGGGCTGTCGCCGCGTCCGGGG GAGTCGTCGGGCTCTGCGCGTTCCCGGCGTTCGTGGACGACACTGCCCCGACCGTGCGCCGGCTGGCCGAGCACGCCGCG TACTTCGCCGAGCGCATCGGTGCCGAGCACGTCGGGATGGGGCTGGACTTCTCCGACGAGGACGCCTCCGACTACGAGTT CTACGGCTACGACGAGCGGTACTACCCACGCCCGCCGTGGACCTGGCCGGCCGGGCTGGAGAGCCACGCGGACGTCCCGG GGCTGAGGGCCGCGCTGGAGCAGGTCGGCTTCTCCGAGGAGGAGACGGCCGGAATCCTCGGCGAGAACTTCCTGCGCGTC TTCGCCGAGGTCTGGGGAGCCTGA
Upstream 100 bases:
>100_bases GCGTCGAGCGTGCCGCGAGCGACTACGGCGTCGTGGTCGACCCGGCGACGTACGACGTCGACGAGGAGGCCACCCGTCGG TTGCGCTCGGTCGGTGCGTC
Downstream 100 bases:
>100_bases GTGGACTGCGACGTCGTCGTGATCGGCGCGGGCATCGTCGGGGCTGCCTGTGCTCGCCGACTGGCCCGAGCGGGCTTGGC CGTCACCGTCGTGGACCGTA
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSEPRPRPAAREPLVLDAAVPLVSHPRHLSALLPALTAGGVGVLLPTVASIEDLATVSSTLGAWRAFEDGPPPGARLARS VSDIRAAQAAGDLAVVLHVQGLHAVGAELDRLELYAAAGVKVAQLTYNYRNYLADGCLEPADAGLSESGRAVVERLNLLR IVPDVSHTGERSSLEIVEISTSPVIASHSNAKALCDHPRNLGDGLARAVAASGGVVGLCAFPAFVDDTAPTVRRLAEHAA YFAERIGAEHVGMGLDFSDEDASDYEFYGYDERYYPRPPWTWPAGLESHADVPGLRAALEQVGFSEEETAGILGENFLRV FAEVWGA
Sequences:
>Translated_327_residues MSEPRPRPAAREPLVLDAAVPLVSHPRHLSALLPALTAGGVGVLLPTVASIEDLATVSSTLGAWRAFEDGPPPGARLARS VSDIRAAQAAGDLAVVLHVQGLHAVGAELDRLELYAAAGVKVAQLTYNYRNYLADGCLEPADAGLSESGRAVVERLNLLR IVPDVSHTGERSSLEIVEISTSPVIASHSNAKALCDHPRNLGDGLARAVAASGGVVGLCAFPAFVDDTAPTVRRLAEHAA YFAERIGAEHVGMGLDFSDEDASDYEFYGYDERYYPRPPWTWPAGLESHADVPGLRAALEQVGFSEEETAGILGENFLRV FAEVWGA >Mature_326_residues SEPRPRPAAREPLVLDAAVPLVSHPRHLSALLPALTAGGVGVLLPTVASIEDLATVSSTLGAWRAFEDGPPPGARLARSV SDIRAAQAAGDLAVVLHVQGLHAVGAELDRLELYAAAGVKVAQLTYNYRNYLADGCLEPADAGLSESGRAVVERLNLLRI VPDVSHTGERSSLEIVEISTSPVIASHSNAKALCDHPRNLGDGLARAVAASGGVVGLCAFPAFVDDTAPTVRRLAEHAAY FAERIGAEHVGMGLDFSDEDASDYEFYGYDERYYPRPPWTWPAGLESHADVPGLRAALEQVGFSEEETAGILGENFLRVF AEVWGA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=252, Percent_Identity=30.5555555555556, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI4758190, Length=252, Percent_Identity=30.5555555555556, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI11641269, Length=252, Percent_Identity=28.968253968254, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI193211608, Length=251, Percent_Identity=27.8884462151394, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI193211610, Length=250, Percent_Identity=27.6, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI281362638, Length=261, Percent_Identity=31.8007662835249, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI281362636, Length=261, Percent_Identity=31.8007662835249, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI161083233, Length=257, Percent_Identity=32.295719844358, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI221475880, Length=267, Percent_Identity=29.2134831460674, Blast_Score=101, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 34633; Mature: 34502
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPRPRPAAREPLVLDAAVPLVSHPRHLSALLPALTAGGVGVLLPTVASIEDLATVSST CCCCCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LGAWRAFEDGPPPGARLARSVSDIRAAQAAGDLAVVLHVQGLHAVGAELDRLELYAAAGV HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHCHHHHHHHHHHCCC KVAQLTYNYRNYLADGCLEPADAGLSESGRAVVERLNLLRIVPDVSHTGERSSLEIVEIS EEEHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC TSPVIASHSNAKALCDHPRNLGDGLARAVAASGGVVGLCAFPAFVDDTAPTVRRLAEHAA CCCEEECCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHH YFAERIGAEHVGMGLDFSDEDASDYEFYGYDERYYPRPPWTWPAGLESHADVPGLRAALE HHHHHHCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH QVGFSEEETAGILGENFLRVFAEVWGA HHCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEPRPRPAAREPLVLDAAVPLVSHPRHLSALLPALTAGGVGVLLPTVASIEDLATVSST CCCCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LGAWRAFEDGPPPGARLARSVSDIRAAQAAGDLAVVLHVQGLHAVGAELDRLELYAAAGV HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHCHHHHHHHHHHCCC KVAQLTYNYRNYLADGCLEPADAGLSESGRAVVERLNLLRIVPDVSHTGERSSLEIVEIS EEEHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC TSPVIASHSNAKALCDHPRNLGDGLARAVAASGGVVGLCAFPAFVDDTAPTVRRLAEHAA CCCEEECCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHH YFAERIGAEHVGMGLDFSDEDASDYEFYGYDERYYPRPPWTWPAGLESHADVPGLRAALE HHHHHHCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH QVGFSEEETAGILGENFLRVFAEVWGA HHCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]