| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is hyuB [H]
Identifier: 119714348
GI number: 119714348
Start: 90197
End: 91915
Strand: Direct
Name: hyuB [H]
Synonym: Noca_0080
Alternate gene names: 119714348
Gene position: 90197-91915 (Clockwise)
Preceding gene: 119714347
Following gene: 119714349
Centisome position: 1.81
GC content: 67.31
Gene sequence:
>1719_bases GTGGTTGATTCCATCACTGTCGAGGTCATCCGCCACAGCCTCCTGGCGTCGGCCGATGAGATGGCGCGCAACCTGTGCCG GACGGCGTACAACACCGTGGTCTACGAGATCCACGACTACGGGATCGGGCTGCACGACGCGGCCGGCGACGTCGTCGCCG ACACGCCGGGCATCGCGATGTTCACGGGGGCCAACGACGTGGGCATCCGCAACACGATCAAGTTCCTCGGCGAGGACAAC CTCCACCCGGGCGACGTGTACTTCCTGAACTACCCGTACTGGTCGTCGGCGCACACCCTGGACGCGCTCGTGCTCGCCCC GATCTTCGTGGGGGAGGAGCTCGTCGCGTGGTCGACCTGCCGGGTCCACCTGCTCGACCTGAAGCAGAAGGACGCGGGCT ACGTGCTCGACTCCACCGACATGTCGCAGGAAGGCATCTTCTTCCCGTCGGTGAAGCTCTACGACCGCGGCGTGATCAAC GACGACATCTTCAACGTGATCCGGTTCAACAGCCGGATGCCCGAGCGGACCATCGGCGACATCCAGGCACAGGTCTCGGC CTGTCAGACCGGGGAACGCCGGGTCCAGGAGATCGCGGCCAAGCACGGCGTGGACGTCCTGCGGGAGGCGATGCGCGAGA TCAACGACCATGGCGAGCGCCTGGCGAAGGCCGCGTTGGCGAAGCTGCCGAAGGGCACCTGGTCGGCGTACGACTTCGTC GACACCGACGGCGTCGTCAAGGACGAGATGGTCCGGATGGACGTCACGGTCACCGTCACCGACGAGAAGATGATCGTCGA CTGGCGGGAGACCTCCAGGCCGGCCAAGGGCCCCATCAACCTGCCGCGTGGTCTCACGGTGGCCACGACGATGATGGCCT TCAAGGCGCTCACCACGCCGGACACTCCGGTGAACTCCGGCAACTTCCGTCCGGTCGAGGTGCTCACGACGCCCGGTTCG CTGATGCATGCGGTTGAGCCGATGCCGACGTTCACGATCTGGCCGGCGATCCTCGCTCCGGAGGTCATCAACAAGGCGCT CGCCCAGGGGATGCCGGACCTGGTCCCGGCGTGCTCGGGTGGGGACGTCTGCTCGATCATGGCGCTCGGGGTCGACCCCG AGACGGGGGTCTCGTGGCTGGAGGCCACGAACGACGGGGTCGGTTTCGGCGCGCACTCGGGCGGCGACGGGTCGGACGGC ATCATGCACCTCTCGGAGCCGGGGTGTCGGAACAACCCGATCGAGATCCTGGAGACCAAGGCGCCCATGATCATCGAGAA CTACCGGTACCGCACCGACTCCGGAGGTCCCGGGAAGTACCGCGGTGGCGTCGGCGTGGAACGCACCTACCGCTTCCTGG CCCCGTCCTCGGCGATCGTCATCAACTACAAGACCAAGACGAAGCCGTGGGGCATCGGCGAGGGTCGTGACGGCCTGAAC AACACGGTCGTGCTCTACCCGGGGACCGACCGCTCCGTCGAGGTCGGCCAGAGCTACACGCACTTCGCGACCAACGAGTG CATGGCCAACGTCACCGGCGGCGGAGGGGGATGGGGCGACCCGTTCACGCGTGACCCGGCCGCCGTCGCCACCGACGTGC GGCTCGGGTTCGTCAGCGTCGAGCGTGCCGCGAGCGACTACGGCGTCGTGGTCGACCCGGCGACGTACGACGTCGACGAG GAGGCCACCCGTCGGTTGCGCTCGGTCGGTGCGTCGTGA
Upstream 100 bases:
>100_bases ATCGTCGAGCACACCTCGACGACGGTCATGCACACCGGCGACACGGCCGAGGTCGGCCGTGTCGGAGAGATCGTCATCAC GCTTGCAGAGGAGACGAACC
Downstream 100 bases:
>100_bases GCGAGCCGAGGCCGCGCCCGGCCGCGCGCGAGCCGCTCGTGCTCGACGCGGCCGTGCCCCTCGTCTCGCATCCCCGGCAC CTGTCGGCTCTGCTCCCTGC
Product: 5-oxoprolinase
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MVDSITVEVIRHSLLASADEMARNLCRTAYNTVVYEIHDYGIGLHDAAGDVVADTPGIAMFTGANDVGIRNTIKFLGEDN LHPGDVYFLNYPYWSSAHTLDALVLAPIFVGEELVAWSTCRVHLLDLKQKDAGYVLDSTDMSQEGIFFPSVKLYDRGVIN DDIFNVIRFNSRMPERTIGDIQAQVSACQTGERRVQEIAAKHGVDVLREAMREINDHGERLAKAALAKLPKGTWSAYDFV DTDGVVKDEMVRMDVTVTVTDEKMIVDWRETSRPAKGPINLPRGLTVATTMMAFKALTTPDTPVNSGNFRPVEVLTTPGS LMHAVEPMPTFTIWPAILAPEVINKALAQGMPDLVPACSGGDVCSIMALGVDPETGVSWLEATNDGVGFGAHSGGDGSDG IMHLSEPGCRNNPIEILETKAPMIIENYRYRTDSGGPGKYRGGVGVERTYRFLAPSSAIVINYKTKTKPWGIGEGRDGLN NTVVLYPGTDRSVEVGQSYTHFATNECMANVTGGGGGWGDPFTRDPAAVATDVRLGFVSVERAASDYGVVVDPATYDVDE EATRRLRSVGAS
Sequences:
>Translated_572_residues MVDSITVEVIRHSLLASADEMARNLCRTAYNTVVYEIHDYGIGLHDAAGDVVADTPGIAMFTGANDVGIRNTIKFLGEDN LHPGDVYFLNYPYWSSAHTLDALVLAPIFVGEELVAWSTCRVHLLDLKQKDAGYVLDSTDMSQEGIFFPSVKLYDRGVIN DDIFNVIRFNSRMPERTIGDIQAQVSACQTGERRVQEIAAKHGVDVLREAMREINDHGERLAKAALAKLPKGTWSAYDFV DTDGVVKDEMVRMDVTVTVTDEKMIVDWRETSRPAKGPINLPRGLTVATTMMAFKALTTPDTPVNSGNFRPVEVLTTPGS LMHAVEPMPTFTIWPAILAPEVINKALAQGMPDLVPACSGGDVCSIMALGVDPETGVSWLEATNDGVGFGAHSGGDGSDG IMHLSEPGCRNNPIEILETKAPMIIENYRYRTDSGGPGKYRGGVGVERTYRFLAPSSAIVINYKTKTKPWGIGEGRDGLN NTVVLYPGTDRSVEVGQSYTHFATNECMANVTGGGGGWGDPFTRDPAAVATDVRLGFVSVERAASDYGVVVDPATYDVDE EATRRLRSVGAS >Mature_572_residues MVDSITVEVIRHSLLASADEMARNLCRTAYNTVVYEIHDYGIGLHDAAGDVVADTPGIAMFTGANDVGIRNTIKFLGEDN LHPGDVYFLNYPYWSSAHTLDALVLAPIFVGEELVAWSTCRVHLLDLKQKDAGYVLDSTDMSQEGIFFPSVKLYDRGVIN DDIFNVIRFNSRMPERTIGDIQAQVSACQTGERRVQEIAAKHGVDVLREAMREINDHGERLAKAALAKLPKGTWSAYDFV DTDGVVKDEMVRMDVTVTVTDEKMIVDWRETSRPAKGPINLPRGLTVATTMMAFKALTTPDTPVNSGNFRPVEVLTTPGS LMHAVEPMPTFTIWPAILAPEVINKALAQGMPDLVPACSGGDVCSIMALGVDPETGVSWLEATNDGVGFGAHSGGDGSDG IMHLSEPGCRNNPIEILETKAPMIIENYRYRTDSGGPGKYRGGVGVERTYRFLAPSSAIVINYKTKTKPWGIGEGRDGLN NTVVLYPGTDRSVEVGQSYTHFATNECMANVTGGGGGWGDPFTRDPAAVATDVRLGFVSVERAASDYGVVVDPATYDVDE EATRRLRSVGAS
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=543, Percent_Identity=27.255985267035, Blast_Score=149, Evalue=5e-36, Organism=Caenorhabditis elegans, GI133901900, Length=545, Percent_Identity=25.6880733944954, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI133901902, Length=508, Percent_Identity=25.1968503937008, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6322634, Length=546, Percent_Identity=24.9084249084249, Blast_Score=147, Evalue=4e-36, Organism=Drosophila melanogaster, GI45550492, Length=558, Percent_Identity=23.6559139784946, Blast_Score=135, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 61935; Mature: 61935
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDSITVEVIRHSLLASADEMARNLCRTAYNTVVYEIHDYGIGLHDAAGDVVADTPGIAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEECCCCEEE FTGANDVGIRNTIKFLGEDNLHPGDVYFLNYPYWSSAHTLDALVLAPIFVGEELVAWSTC EECCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHEEHEE RVHLLDLKQKDAGYVLDSTDMSQEGIFFPSVKLYDRGVINDDIFNVIRFNSRMPERTIGD EEEEEECCCCCCCEEEECCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHH IQAQVSACQTGERRVQEIAAKHGVDVLREAMREINDHGERLAKAALAKLPKGTWSAYDFV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE DTDGVVKDEMVRMDVTVTVTDEKMIVDWRETSRPAKGPINLPRGLTVATTMMAFKALTTP CCCCCCCCCEEEEEEEEEEECCEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC DTPVNSGNFRPVEVLTTPGSLMHAVEPMPTFTIWPAILAPEVINKALAQGMPDLVPACSG CCCCCCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GDVCSIMALGVDPETGVSWLEATNDGVGFGAHSGGDGSDGIMHLSEPGCRNNPIEILETK CCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHEEECC APMIIENYRYRTDSGGPGKYRGGVGVERTYRFLAPSSAIVINYKTKTKPWGIGEGRDGLN CCEEEECCEEECCCCCCCCCCCCCCHHHHHHEECCCCEEEEEEECCCCCCCCCCCCCCCC NTVVLYPGTDRSVEVGQSYTHFATNECMANVTGGGGGWGDPFTRDPAAVATDVRLGFVSV CEEEEECCCCCCEECCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHEEHHEEEEEEH ERAASDYGVVVDPATYDVDEEATRRLRSVGAS HHCCCCCCEEECCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MVDSITVEVIRHSLLASADEMARNLCRTAYNTVVYEIHDYGIGLHDAAGDVVADTPGIAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEECCCCEEE FTGANDVGIRNTIKFLGEDNLHPGDVYFLNYPYWSSAHTLDALVLAPIFVGEELVAWSTC EECCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHEEHEE RVHLLDLKQKDAGYVLDSTDMSQEGIFFPSVKLYDRGVINDDIFNVIRFNSRMPERTIGD EEEEEECCCCCCCEEEECCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHH IQAQVSACQTGERRVQEIAAKHGVDVLREAMREINDHGERLAKAALAKLPKGTWSAYDFV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE DTDGVVKDEMVRMDVTVTVTDEKMIVDWRETSRPAKGPINLPRGLTVATTMMAFKALTTP CCCCCCCCCEEEEEEEEEEECCEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC DTPVNSGNFRPVEVLTTPGSLMHAVEPMPTFTIWPAILAPEVINKALAQGMPDLVPACSG CCCCCCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GDVCSIMALGVDPETGVSWLEATNDGVGFGAHSGGDGSDGIMHLSEPGCRNNPIEILETK CCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHEEECC APMIIENYRYRTDSGGPGKYRGGVGVERTYRFLAPSSAIVINYKTKTKPWGIGEGRDGLN CCEEEECCEEECCCCCCCCCCCCCCHHHHHHEECCCCEEEEEEECCCCCCCCCCCCCCCC NTVVLYPGTDRSVEVGQSYTHFATNECMANVTGGGGGWGDPFTRDPAAVATDVRLGFVSV CEEEEECCCCCCEECCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHEEHHEEEEEEH ERAASDYGVVVDPATYDVDEEATRRLRSVGAS HHCCCCCCEEECCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]