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The map label for this gene is yurO [H]

Identifier: 119714330

GI number: 119714330

Start: 66676

End: 67995

Strand: Direct

Name: yurO [H]

Synonym: Noca_0059

Alternate gene names: 119714330

Gene position: 66676-67995 (Clockwise)

Preceding gene: 119714329

Following gene: 119714331

Centisome position: 1.34

GC content: 63.94

Gene sequence:

>1320_bases
ATGATTGGTCGACACCTCGTCAGTCGGCGCCGGCGCCGGATCGCCGCCGCGGCGCTGGCAGTCTCGTCGCTCCTCGCCCT
CGCGGCATGCAGCAGCGCGAGCGACTCCAACAACGCGGACGGCAAGACGACGATCACGTTGTCCATGCAGAACCCCGACG
TGAAGACGGCCGACCCAGCTACGTGGGCCATCGTCGAGGCGTTCGAGAAGGCCAATCCCGACATCAAGGTCGAGGTCAGT
GGCCAGGCCGTAGCCGAGCACCTCCAGAGCCTCTCCATCGCCGCGCAGAGTGACACGCTCCCGGACGTGTTCTGGGTGTA
CAAGGCGACCGCCGAAGACATGCTCGAGGCCGGCAAGCTGATGGACCTCAAACCGACCTTGGACGAGCTGGGGATCACGG
AGAACCTGCCGGAGAGCACCGTCGCGAACTTCACGGCCGGCGACCAGATCTACGGCGTTCCCTACCAGGGGCTCCTCACC
GGTCTGTGGGTCAACAAGAAGATCCTGGCCGACAACGGGCTCGAGATGCCGAGCACATTCGACGACCTCGTCAACGTCGC
TCAGGAGCTGAGTAGCAAGGACGTCGTCACCATCTCTAACGGCGCGAACCAGTCGTCGTTCAGCGTCTGGTCCTTCCTGG
TCTGGCTGGACCGGTTCGGTTTCGAGGACAAGATCAGCGGCATGCTCGATGGATCGGAGAGCTACGACAACCCTGACTTC
GTGCGTATGTACAAGCACATCGCCGAACTCCGCGACGCCGGTGCTTTCGCCTCCAACGTCTCCACGCAGACCTACCAGCA
GGCTGTGGACCAGTTCCTCCAGGGCAAGGCCGCGATGCTCGACGCCGGGGTCTGGGCATCGAGCGCCATCCAGGACTCCC
CTGTGGCAGCGGACACGGTGTTCTGGAACGGCGCCACCTTCGACGACGGTGTCGGTGATCAGAACATCGTCATGAACGTG
GCATCCGCGCCGCTCGTCGTGGACCACAAGGTCGCAGATGACCAGGACAAGCTCGACGCAGTCAAGGCGTTCCTGGACTT
CTACTACGGTGACGAGGCGCAGCAACTCCTCGTTGACAACGGCCAGCCGCCTGTGACGAACTACGAGCCGCAGATCGACG
CCACCAAGCAGAGTGTGCTGAAGTCGGCCTTGGATGTCGCCACCGACCCGTCTCTGAGCAGCCCGCAGTCTCAGCCCGAC
CTGCTGGTGTCGACGGCCGTGGCGAGCGCGATGTACGACAGCATCTACGGCGTGATCCAGAACCAGCTCTCCCCCGAGGA
GGCCGTGGCGCTGGTGCAGAAGGCGCTCGACGCCGAGTGA

Upstream 100 bases:

>100_bases
GTGACGGCCGACATTACGTTGGGCGAAACGATTCGCGCAAACGTTTCGATATCTCGGTGATCTAGTCCCACTTCACTCCG
CCTCTCCTGAAGGAAACGCC

Downstream 100 bases:

>100_bases
TGACGGGGCGCGCCCGCTGACCGCATGGCGGGCGCGCCCCACCCCCCGCGATCCTCAACCTTTCAACACTCGCCCGGACC
ACGCGGGCCTCGACGCCTAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MIGRHLVSRRRRRIAAAALAVSSLLALAACSSASDSNNADGKTTITLSMQNPDVKTADPATWAIVEAFEKANPDIKVEVS
GQAVAEHLQSLSIAAQSDTLPDVFWVYKATAEDMLEAGKLMDLKPTLDELGITENLPESTVANFTAGDQIYGVPYQGLLT
GLWVNKKILADNGLEMPSTFDDLVNVAQELSSKDVVTISNGANQSSFSVWSFLVWLDRFGFEDKISGMLDGSESYDNPDF
VRMYKHIAELRDAGAFASNVSTQTYQQAVDQFLQGKAAMLDAGVWASSAIQDSPVAADTVFWNGATFDDGVGDQNIVMNV
ASAPLVVDHKVADDQDKLDAVKAFLDFYYGDEAQQLLVDNGQPPVTNYEPQIDATKQSVLKSALDVATDPSLSSPQSQPD
LLVSTAVASAMYDSIYGVIQNQLSPEEAVALVQKALDAE

Sequences:

>Translated_439_residues
MIGRHLVSRRRRRIAAAALAVSSLLALAACSSASDSNNADGKTTITLSMQNPDVKTADPATWAIVEAFEKANPDIKVEVS
GQAVAEHLQSLSIAAQSDTLPDVFWVYKATAEDMLEAGKLMDLKPTLDELGITENLPESTVANFTAGDQIYGVPYQGLLT
GLWVNKKILADNGLEMPSTFDDLVNVAQELSSKDVVTISNGANQSSFSVWSFLVWLDRFGFEDKISGMLDGSESYDNPDF
VRMYKHIAELRDAGAFASNVSTQTYQQAVDQFLQGKAAMLDAGVWASSAIQDSPVAADTVFWNGATFDDGVGDQNIVMNV
ASAPLVVDHKVADDQDKLDAVKAFLDFYYGDEAQQLLVDNGQPPVTNYEPQIDATKQSVLKSALDVATDPSLSSPQSQPD
LLVSTAVASAMYDSIYGVIQNQLSPEEAVALVQKALDAE
>Mature_439_residues
MIGRHLVSRRRRRIAAAALAVSSLLALAACSSASDSNNADGKTTITLSMQNPDVKTADPATWAIVEAFEKANPDIKVEVS
GQAVAEHLQSLSIAAQSDTLPDVFWVYKATAEDMLEAGKLMDLKPTLDELGITENLPESTVANFTAGDQIYGVPYQGLLT
GLWVNKKILADNGLEMPSTFDDLVNVAQELSSKDVVTISNGANQSSFSVWSFLVWLDRFGFEDKISGMLDGSESYDNPDF
VRMYKHIAELRDAGAFASNVSTQTYQQAVDQFLQGKAAMLDAGVWASSAIQDSPVAADTVFWNGATFDDGVGDQNIVMNV
ASAPLVVDHKVADDQDKLDAVKAFLDFYYGDEAQQLLVDNGQPPVTNYEPQIDATKQSVLKSALDVATDPSLSSPQSQPD
LLVSTAVASAMYDSIYGVIQNQLSPEEAVALVQKALDAE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47192; Mature: 47192

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRHLVSRRRRRIAAAALAVSSLLALAACSSASDSNNADGKTTITLSMQNPDVKTADPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCH
TWAIVEAFEKANPDIKVEVSGQAVAEHLQSLSIAAQSDTLPDVFWVYKATAEDMLEAGKL
HHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
MDLKPTLDELGITENLPESTVANFTAGDQIYGVPYQGLLTGLWVNKKILADNGLEMPSTF
CCCCCCHHHCCCCCCCCHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEECCCCCCCCCHH
DDLVNVAQELSSKDVVTISNGANQSSFSVWSFLVWLDRFGFEDKISGMLDGSESYDNPDF
HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHH
VRMYKHIAELRDAGAFASNVSTQTYQQAVDQFLQGKAAMLDAGVWASSAIQDSPVAADTV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCCCEEEE
FWNGATFDDGVGDQNIVMNVASAPLVVDHKVADDQDKLDAVKAFLDFYYGDEAQQLLVDN
EECCCCCCCCCCCCHHEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCC
GQPPVTNYEPQIDATKQSVLKSALDVATDPSLSSPQSQPDLLVSTAVASAMYDSIYGVIQ
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NQLSPEEAVALVQKALDAE
HCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGRHLVSRRRRRIAAAALAVSSLLALAACSSASDSNNADGKTTITLSMQNPDVKTADPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCH
TWAIVEAFEKANPDIKVEVSGQAVAEHLQSLSIAAQSDTLPDVFWVYKATAEDMLEAGKL
HHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
MDLKPTLDELGITENLPESTVANFTAGDQIYGVPYQGLLTGLWVNKKILADNGLEMPSTF
CCCCCCHHHCCCCCCCCHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEECCCCCCCCCHH
DDLVNVAQELSSKDVVTISNGANQSSFSVWSFLVWLDRFGFEDKISGMLDGSESYDNPDF
HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHH
VRMYKHIAELRDAGAFASNVSTQTYQQAVDQFLQGKAAMLDAGVWASSAIQDSPVAADTV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCCCEEEE
FWNGATFDDGVGDQNIVMNVASAPLVVDHKVADDQDKLDAVKAFLDFYYGDEAQQLLVDN
EECCCCCCCCCCCCHHEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCC
GQPPVTNYEPQIDATKQSVLKSALDVATDPSLSSPQSQPDLLVSTAVASAMYDSIYGVIQ
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NQLSPEEAVALVQKALDAE
HCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]