Click here to switch to the map view.

The map label for this gene is yurN [H]

Identifier: 119714331

GI number: 119714331

Start: 68116

End: 68985

Strand: Direct

Name: yurN [H]

Synonym: Noca_0060

Alternate gene names: 119714331

Gene position: 68116-68985 (Clockwise)

Preceding gene: 119714330

Following gene: 119714332

Centisome position: 1.37

GC content: 63.45

Gene sequence:

>870_bases
ATGATCTGGATCAGCTCCCGCTGGAAGATCGCGTTGATGCTCGCGCCGGCGCTCATCCTCTTCACCGCGTTCTTCGTCTA
CCCCGTGGGCTACGCGATCGCCTACAGCTTCACTGACTCGGCCGGCTTCGGAGCCGCGAAGTTCGTCGGTCTCGACAACT
ACCTGGCGCTGAAGGACGACCCGTTCTTCTGGCAGTCCATGCGGAACACCATCGCCATCCTCGTGGTCAGCGTCGCGCTC
CTCATCCCGGCATCCTTCGGACTCGCACTCCTCCTCCGCCGGCGCATCAGAGGTGGCGGTGCGTTGCGCGCCCTGGTATT
CGGGCCAGCGATCATCGCGCCGATCCTGGTCGGCCTGATCTGGGTCTTCATCCTCGACCCGAAGATCGGGCTGCTCAACC
GTGCTCTCGAGCCGCTGGGCGTCGAGCCCATTCAGTGGATCGGCGGGAACACCCTGACCCCCTACGCGATCTCCTTGGTC
TTCATCTGGAGCAGCGTCGGCTTCGCGATGACGATCTTCTACGCCGGGCTGCAACTATTGCCCGGGGATGTCATGGAGGC
TGCCCAGCTCGATGGGGCGGGCTCCTGGCAGCAGCTGCGGTTCGTGACGATCCCGATGATGAGAGAGACCTTCGCCATCG
TGGCCATCTTGTTGATCACGAACGTCTTCAAGATCTTTGAGCTGGTCTACATGCTCACCGGCGGCGGTCCGGTGCACCGG
TCGGAGACGCTGGTGAGCTACATGTACTTCGTCACCTTTACCAACCAGCGCTACGGATCCGGGATGGCGATCGCCGTCGT
GATCTTCGTGCTTGGGGCGCTCACGTCCCTGGCCTACCTCGCGGCCGCGCGGCGACGGAGCCTCGCATGA

Upstream 100 bases:

>100_bases
CCGCATGGCGGGCGCGCCCCACCCCCCGCGATCCTCAACCTTTCAACACTCGCCCGGACCACGCGGGCCTCGACGCCTAC
CAGATGGGACGACCTGAACG

Downstream 100 bases:

>100_bases
GTTCACGGCCGCGGACACCGCCCCGGCGGACCGCCAGCAGACGCCCGTCCGACACCCACCGATGCAGCGAGCAGCCCCAT
GACGACACTGACTGACACCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIWISSRWKIALMLAPALILFTAFFVYPVGYAIAYSFTDSAGFGAAKFVGLDNYLALKDDPFFWQSMRNTIAILVVSVAL
LIPASFGLALLLRRRIRGGGALRALVFGPAIIAPILVGLIWVFILDPKIGLLNRALEPLGVEPIQWIGGNTLTPYAISLV
FIWSSVGFAMTIFYAGLQLLPGDVMEAAQLDGAGSWQQLRFVTIPMMRETFAIVAILLITNVFKIFELVYMLTGGGPVHR
SETLVSYMYFVTFTNQRYGSGMAIAVVIFVLGALTSLAYLAAARRRSLA

Sequences:

>Translated_289_residues
MIWISSRWKIALMLAPALILFTAFFVYPVGYAIAYSFTDSAGFGAAKFVGLDNYLALKDDPFFWQSMRNTIAILVVSVAL
LIPASFGLALLLRRRIRGGGALRALVFGPAIIAPILVGLIWVFILDPKIGLLNRALEPLGVEPIQWIGGNTLTPYAISLV
FIWSSVGFAMTIFYAGLQLLPGDVMEAAQLDGAGSWQQLRFVTIPMMRETFAIVAILLITNVFKIFELVYMLTGGGPVHR
SETLVSYMYFVTFTNQRYGSGMAIAVVIFVLGALTSLAYLAAARRRSLA
>Mature_289_residues
MIWISSRWKIALMLAPALILFTAFFVYPVGYAIAYSFTDSAGFGAAKFVGLDNYLALKDDPFFWQSMRNTIAILVVSVAL
LIPASFGLALLLRRRIRGGGALRALVFGPAIIAPILVGLIWVFILDPKIGLLNRALEPLGVEPIQWIGGNTLTPYAISLV
FIWSSVGFAMTIFYAGLQLLPGDVMEAAQLDGAGSWQQLRFVTIPMMRETFAIVAILLITNVFKIFELVYMLTGGGPVHR
SETLVSYMYFVTFTNQRYGSGMAIAVVIFVLGALTSLAYLAAARRRSLA

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=272, Percent_Identity=30.8823529411765, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787570, Length=233, Percent_Identity=28.3261802575107, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790465, Length=230, Percent_Identity=27.3913043478261, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31649; Mature: 31649

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWISSRWKIALMLAPALILFTAFFVYPVGYAIAYSFTDSAGFGAAKFVGLDNYLALKDD
CEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCEEEECCC
PFFWQSMRNTIAILVVSVALLIPASFGLALLLRRRIRGGGALRALVFGPAIIAPILVGLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
WVFILDPKIGLLNRALEPLGVEPIQWIGGNTLTPYAISLVFIWSSVGFAMTIFYAGLQLL
HHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGDVMEAAQLDGAGSWQQLRFVTIPMMRETFAIVAILLITNVFKIFELVYMLTGGGPVHR
CHHHHHHHHCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SETLVSYMYFVTFTNQRYGSGMAIAVVIFVLGALTSLAYLAAARRRSLA
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIWISSRWKIALMLAPALILFTAFFVYPVGYAIAYSFTDSAGFGAAKFVGLDNYLALKDD
CEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCEEEECCC
PFFWQSMRNTIAILVVSVALLIPASFGLALLLRRRIRGGGALRALVFGPAIIAPILVGLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
WVFILDPKIGLLNRALEPLGVEPIQWIGGNTLTPYAISLVFIWSSVGFAMTIFYAGLQLL
HHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGDVMEAAQLDGAGSWQQLRFVTIPMMRETFAIVAILLITNVFKIFELVYMLTGGGPVHR
CHHHHHHHHCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SETLVSYMYFVTFTNQRYGSGMAIAVVIFVLGALTSLAYLAAARRRSLA
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]