| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119387124
Identifier: 119387124
GI number: 119387124
Start: 1621789
End: 1622154
Strand: Direct
Name: 119387124
Synonym: Pden_4419
Alternate gene names: NA
Gene position: 1621789-1622154 (Clockwise)
Preceding gene: 119387120
Following gene: 119387125
Centisome position: 93.74
GC content: 69.13
Gene sequence:
>366_bases ATGCGCGGCCGAAAGAGGGTGCCCAGCCCCGTTGCCGCGGCAGGAGCCGAGGAGACAGACATGTTCAACCGACTGATGAT CGCCGCCGCCGCGGTGGTGCTGACCACGCCGCTCGCCGTCGCCGGTCCGATCGATTCCGCCTGCGTGCGTTCGGAACGCG CCGCGCGCAGCAGCCAGGTCTGCGGCTGCATCCAGCAGGTCGCCGACCAGACGCTGTCGCGTTCGGACCAGCGCCGCGCC GCCCGCTTCTTCCGCGATGCGGACAAGGCGCAAGAGGTGCGCATGTCGAAAAGCGATGCCGACAACGCCTTCTGGGCGCG CTACAAGAACTTCGCCGCAGCAGCCGAGGCCTATTGCGCGCGCTGA
Upstream 100 bases:
>100_bases TTGGGGTCGCTTGCGCCCCGGCCGCCATCCTTGGGCCGGCCCATGCCGCCCTGTCGCAATTGAGGCGCAGGGCGGCTTCT GCTAAGCTTTGCCCCACAAG
Downstream 100 bases:
>100_bases GGATCTCATGCGCATCACCGTGCTGACGGGGGCCGGCATTTCGGCCGAAAGCGGGATCAGGACGTTCCGCGCCACTGACG GGCTGTGGGAATCCCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MRGRKRVPSPVAAAGAEETDMFNRLMIAAAAVVLTTPLAVAGPIDSACVRSERAARSSQVCGCIQQVADQTLSRSDQRRA ARFFRDADKAQEVRMSKSDADNAFWARYKNFAAAAEAYCAR
Sequences:
>Translated_121_residues MRGRKRVPSPVAAAGAEETDMFNRLMIAAAAVVLTTPLAVAGPIDSACVRSERAARSSQVCGCIQQVADQTLSRSDQRRA ARFFRDADKAQEVRMSKSDADNAFWARYKNFAAAAEAYCAR >Mature_121_residues MRGRKRVPSPVAAAGAEETDMFNRLMIAAAAVVLTTPLAVAGPIDSACVRSERAARSSQVCGCIQQVADQTLSRSDQRRA ARFFRDADKAQEVRMSKSDADNAFWARYKNFAAAAEAYCAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13145; Mature: 13145
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRKRVPSPVAAAGAEETDMFNRLMIAAAAVVLTTPLAVAGPIDSACVRSERAARSSQV CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CGCIQQVADQTLSRSDQRRAARFFRDADKAQEVRMSKSDADNAFWARYKNFAAAAEAYCA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC R C >Mature Secondary Structure MRGRKRVPSPVAAAGAEETDMFNRLMIAAAAVVLTTPLAVAGPIDSACVRSERAARSSQV CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CGCIQQVADQTLSRSDQRRAARFFRDADKAQEVRMSKSDADNAFWARYKNFAAAAEAYCA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA