Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386897

Identifier: 119386897

GI number: 119386897

Start: 1348066

End: 1349481

Strand: Direct

Name: 119386897

Synonym: Pden_4192

Alternate gene names: NA

Gene position: 1348066-1349481 (Clockwise)

Preceding gene: 119386896

Following gene: 119386898

Centisome position: 77.92

GC content: 72.53

Gene sequence:

>1416_bases
ATGCGCGACGACAGCCTGGCCAGAAACCTGCGGGCACCGGGACCGGGGCAAGGCGGCTGCCCCATGGGCTGCGCGCCGCT
GATGGGGTCGCTGCGCGACATGGGGGCGCTGGCCTCGCCGCTGTCCCAGGCCGACGACCGCCCCGATATCGGCCAGCGCC
TGCCCCAGATCCTGCTGAACACAACGCCCGACTGGCGCGCGGCCTGCCTTGAGCTGACCGCGCATATCCCCTCGGGCTAT
ACCTATCTGGCGCAACTGATGGGCCATGACATGGGCAGCAGCGTGCCGGCCGACAGCGTGCCCTATGCCCGGCCCGAAGG
CGGCGTCGGCCCGGCCAGGCGCTACAACCTGATCGACAATCCGCTGACGCTGGAAACGGTCTATGGTCCCGGCCCGGCCA
TGCTGACGCATGTCTACGATCCCGAGACCTGCCTGTTCCGCCTGACCCGCGGTGCGCGGCTGGCGCGGCTTTATGGCCGT
GCCGCCGGCGCCTCGTCGGACCCCGATCCCCGGCCGATCCGGGCGCTCTATGACGAGCGCAACCGCGACTCGCTGATGCT
GCACGAGCTGACGGTGGCCTGGATGCAGTTCCACAACCGGCTGGCCCGCCACCTGATGGCCGAGGGGCTGGAGCCGTTCC
GCGCCTATGTCCTGGCCCGCGCCCATGCCCTGCGCTGCTGGCACGGCATCCTGGCCGGCGACCTGCTGCCGCGTTTCCTG
CATCCCCGGATCGCGGCGCTGGACGGCGATGCCCTGCCCGGTTGCTGGGCGCTGGACGAGACCACGTTGCTGCATGGGCT
GTGCCGCGCCTTCCACGCCCTGCCGCTGGCGGCCTATCACCTGGGCCGCTCGGGACTGCACAACCTGGGCACGCTGCTCA
AGCGCGGCTACGCCCCCAGCGAGGCCGAGACCGACTGGCATATCGACTGGCCGCTGTTCCTCGGCGCCAGCCCCGGCGCG
CCGCTGACCGGCATCTCGGCCAGCGTGGCGCCCGAACTGCGCGCGCCGGTGACGGCGGCGGCGGTGATCGCGCTCGACAA
CCGCTCGGCCGCCGAGGCCGGATCGCTGCGGCCCGGCAACGATCCGATCCGCGCCGCCATCGCCGCCCTGCCCGGCGACT
GGCCCACGCGCATCGCCCCCGCCCGGCTGGCCGACGATTTCGCCGCCGCCCATCCGCAGGCGCCGATCCGCATCGATGCC
GAGGGGCTGGAATGGGGGCCGCTCTACCAGTTCCTGATGGTCGAGGCGCAGCTGCACGGCCGGCTGGGCGGCTTCGGCCC
GCTGGGCAGCGCCTTGTTGCGCGGCTCGGTCCTGGGCTCGATCCGCCGCGTCGTGCTGGCGCCCGAAACCGAAGCGACCG
CCGGCCTGCCCCGGCCCGCGACCATGCTGGAACTGATCACGCTTGCCAGGCAATAA

Upstream 100 bases:

>100_bases
CGCCGCCCGAAGGGCCGCTCAGCGTCTGGATCTGCCGTCCCGACGCAGCCGCGCCGCCTTTCACCGACGAGACGGGCCTG
CCCTATCTGTGAGGATTGCG

Downstream 100 bases:

>100_bases
CGGAGAAACGACCATGACAGGGACGCGCCGCAAATACATCATCATCGGGGCCGAGGTGGACCAGCCCGAGGCGTGGCTGC
ACAAGGACGGCAGCATCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLNTTPDWRAACLELTAHIPSGY
TYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDNPLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGR
AAGASSDPDPRPIRALYDERNRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL
HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPSEAETDWHIDWPLFLGASPGA
PLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGNDPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDA
EGLEWGPLYQFLMVEAQLHGRLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ

Sequences:

>Translated_471_residues
MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLNTTPDWRAACLELTAHIPSGY
TYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDNPLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGR
AAGASSDPDPRPIRALYDERNRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL
HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPSEAETDWHIDWPLFLGASPGA
PLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGNDPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDA
EGLEWGPLYQFLMVEAQLHGRLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ
>Mature_471_residues
MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLNTTPDWRAACLELTAHIPSGY
TYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDNPLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGR
AAGASSDPDPRPIRALYDERNRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL
HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPSEAETDWHIDWPLFLGASPGA
PLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGNDPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDA
EGLEWGPLYQFLMVEAQLHGRLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50558; Mature: 50558

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLN
CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
TTPDWRAACLELTAHIPSGYTYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDN
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
PLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGRAAGASSDPDPRPIRALYDER
CEEEEEEECCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
NRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPS
CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
EAETDWHIDWPLFLGASPGAPLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGN
CCCCCEEECCCEEECCCCCCCCCCCCHHHCCHHHCCHHEEEEEEECCCCCCCCCCCCCCC
DPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDAEGLEWGPLYQFLMVEAQLHG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHC
RLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ
CCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLN
CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
TTPDWRAACLELTAHIPSGYTYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDN
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
PLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGRAAGASSDPDPRPIRALYDER
CEEEEEEECCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
NRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPS
CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
EAETDWHIDWPLFLGASPGAPLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGN
CCCCCEEECCCEEECCCCCCCCCCCCHHHCCHHHCCHHEEEEEEECCCCCCCCCCCCCCC
DPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDAEGLEWGPLYQFLMVEAQLHG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHC
RLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ
CCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA