| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386897
Identifier: 119386897
GI number: 119386897
Start: 1348066
End: 1349481
Strand: Direct
Name: 119386897
Synonym: Pden_4192
Alternate gene names: NA
Gene position: 1348066-1349481 (Clockwise)
Preceding gene: 119386896
Following gene: 119386898
Centisome position: 77.92
GC content: 72.53
Gene sequence:
>1416_bases ATGCGCGACGACAGCCTGGCCAGAAACCTGCGGGCACCGGGACCGGGGCAAGGCGGCTGCCCCATGGGCTGCGCGCCGCT GATGGGGTCGCTGCGCGACATGGGGGCGCTGGCCTCGCCGCTGTCCCAGGCCGACGACCGCCCCGATATCGGCCAGCGCC TGCCCCAGATCCTGCTGAACACAACGCCCGACTGGCGCGCGGCCTGCCTTGAGCTGACCGCGCATATCCCCTCGGGCTAT ACCTATCTGGCGCAACTGATGGGCCATGACATGGGCAGCAGCGTGCCGGCCGACAGCGTGCCCTATGCCCGGCCCGAAGG CGGCGTCGGCCCGGCCAGGCGCTACAACCTGATCGACAATCCGCTGACGCTGGAAACGGTCTATGGTCCCGGCCCGGCCA TGCTGACGCATGTCTACGATCCCGAGACCTGCCTGTTCCGCCTGACCCGCGGTGCGCGGCTGGCGCGGCTTTATGGCCGT GCCGCCGGCGCCTCGTCGGACCCCGATCCCCGGCCGATCCGGGCGCTCTATGACGAGCGCAACCGCGACTCGCTGATGCT GCACGAGCTGACGGTGGCCTGGATGCAGTTCCACAACCGGCTGGCCCGCCACCTGATGGCCGAGGGGCTGGAGCCGTTCC GCGCCTATGTCCTGGCCCGCGCCCATGCCCTGCGCTGCTGGCACGGCATCCTGGCCGGCGACCTGCTGCCGCGTTTCCTG CATCCCCGGATCGCGGCGCTGGACGGCGATGCCCTGCCCGGTTGCTGGGCGCTGGACGAGACCACGTTGCTGCATGGGCT GTGCCGCGCCTTCCACGCCCTGCCGCTGGCGGCCTATCACCTGGGCCGCTCGGGACTGCACAACCTGGGCACGCTGCTCA AGCGCGGCTACGCCCCCAGCGAGGCCGAGACCGACTGGCATATCGACTGGCCGCTGTTCCTCGGCGCCAGCCCCGGCGCG CCGCTGACCGGCATCTCGGCCAGCGTGGCGCCCGAACTGCGCGCGCCGGTGACGGCGGCGGCGGTGATCGCGCTCGACAA CCGCTCGGCCGCCGAGGCCGGATCGCTGCGGCCCGGCAACGATCCGATCCGCGCCGCCATCGCCGCCCTGCCCGGCGACT GGCCCACGCGCATCGCCCCCGCCCGGCTGGCCGACGATTTCGCCGCCGCCCATCCGCAGGCGCCGATCCGCATCGATGCC GAGGGGCTGGAATGGGGGCCGCTCTACCAGTTCCTGATGGTCGAGGCGCAGCTGCACGGCCGGCTGGGCGGCTTCGGCCC GCTGGGCAGCGCCTTGTTGCGCGGCTCGGTCCTGGGCTCGATCCGCCGCGTCGTGCTGGCGCCCGAAACCGAAGCGACCG CCGGCCTGCCCCGGCCCGCGACCATGCTGGAACTGATCACGCTTGCCAGGCAATAA
Upstream 100 bases:
>100_bases CGCCGCCCGAAGGGCCGCTCAGCGTCTGGATCTGCCGTCCCGACGCAGCCGCGCCGCCTTTCACCGACGAGACGGGCCTG CCCTATCTGTGAGGATTGCG
Downstream 100 bases:
>100_bases CGGAGAAACGACCATGACAGGGACGCGCCGCAAATACATCATCATCGGGGCCGAGGTGGACCAGCCCGAGGCGTGGCTGC ACAAGGACGGCAGCATCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLNTTPDWRAACLELTAHIPSGY TYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDNPLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGR AAGASSDPDPRPIRALYDERNRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPSEAETDWHIDWPLFLGASPGA PLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGNDPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDA EGLEWGPLYQFLMVEAQLHGRLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ
Sequences:
>Translated_471_residues MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLNTTPDWRAACLELTAHIPSGY TYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDNPLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGR AAGASSDPDPRPIRALYDERNRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPSEAETDWHIDWPLFLGASPGA PLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGNDPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDA EGLEWGPLYQFLMVEAQLHGRLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ >Mature_471_residues MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLNTTPDWRAACLELTAHIPSGY TYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDNPLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGR AAGASSDPDPRPIRALYDERNRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPSEAETDWHIDWPLFLGASPGA PLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGNDPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDA EGLEWGPLYQFLMVEAQLHGRLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50558; Mature: 50558
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLN CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC TTPDWRAACLELTAHIPSGYTYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDN CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC PLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGRAAGASSDPDPRPIRALYDER CEEEEEEECCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCC NRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPS CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC EAETDWHIDWPLFLGASPGAPLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGN CCCCCEEECCCEEECCCCCCCCCCCCHHHCCHHHCCHHEEEEEEECCCCCCCCCCCCCCC DPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDAEGLEWGPLYQFLMVEAQLHG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHC RLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ CCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRDDSLARNLRAPGPGQGGCPMGCAPLMGSLRDMGALASPLSQADDRPDIGQRLPQILLN CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC TTPDWRAACLELTAHIPSGYTYLAQLMGHDMGSSVPADSVPYARPEGGVGPARRYNLIDN CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC PLTLETVYGPGPAMLTHVYDPETCLFRLTRGARLARLYGRAAGASSDPDPRPIRALYDER CEEEEEEECCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCC NRDSLMLHELTVAWMQFHNRLARHLMAEGLEPFRAYVLARAHALRCWHGILAGDLLPRFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPRIAALDGDALPGCWALDETTLLHGLCRAFHALPLAAYHLGRSGLHNLGTLLKRGYAPS CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC EAETDWHIDWPLFLGASPGAPLTGISASVAPELRAPVTAAAVIALDNRSAAEAGSLRPGN CCCCCEEECCCEEECCCCCCCCCCCCHHHCCHHHCCHHEEEEEEECCCCCCCCCCCCCCC DPIRAAIAALPGDWPTRIAPARLADDFAAAHPQAPIRIDAEGLEWGPLYQFLMVEAQLHG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHC RLGGFGPLGSALLRGSVLGSIRRVVLAPETEATAGLPRPATMLELITLARQ CCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA